autogaita 1.5.4__tar.gz → 1.5.5__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (99) hide show
  1. {autogaita-1.5.4 → autogaita-1.5.5}/PKG-INFO +2 -2
  2. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/PKG-INFO +2 -2
  3. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/SOURCES.txt +1 -0
  4. autogaita-1.5.5/autogaita_backup/backup_setup.py +44 -0
  5. {autogaita-1.5.4 → autogaita-1.5.5}/pyproject.toml +2 -2
  6. {autogaita-1.5.4 → autogaita-1.5.5}/LICENSE +0 -0
  7. {autogaita-1.5.4 → autogaita-1.5.5}/README.md +0 -0
  8. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/__init__.py +0 -0
  9. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/__main__.py +0 -0
  10. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/__init__.py +0 -0
  11. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/dlc_multirun.py +0 -0
  12. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/dlc_singlerun.py +0 -0
  13. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/group_dlcrun.py +0 -0
  14. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/group_universal3Drun.py +0 -0
  15. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/sleap_singlerun.py +0 -0
  16. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/universal3D_multirun.py +0 -0
  17. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/batchrun_scripts/universal3D_singlerun.py +0 -0
  18. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/__init__.py +0 -0
  19. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_1_preparation.py +0 -0
  20. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_2_sc_extraction.py +0 -0
  21. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_3_analysis.py +0 -0
  22. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_4_plots.py +0 -0
  23. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_constants.py +0 -0
  24. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/common2D/common2D_utils.py +0 -0
  25. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/dlc/__init__.py +0 -0
  26. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/dlc/dlc_main.py +0 -0
  27. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/__init__.py +0 -0
  28. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_1_preparation.py +0 -0
  29. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_2_data_processing.py +0 -0
  30. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_3_PCA.py +0 -0
  31. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_4_stats.py +0 -0
  32. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_5_plots.py +0 -0
  33. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_constants.py +0 -0
  34. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_main.py +0 -0
  35. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/group/group_utils.py +0 -0
  36. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/__init__.py +0 -0
  37. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_advanced_config_gui.py +0 -0
  38. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_columninfo_gui.py +0 -0
  39. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_gui_constants.py +0 -0
  40. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_gui_utils.py +0 -0
  41. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_main_gui.py +0 -0
  42. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/common2D_run_and_done_gui.py +0 -0
  43. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/dlc_gui.py +0 -0
  44. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/dlc_gui_config.json +0 -0
  45. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/first_level_gui_utils.py +0 -0
  46. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/gaita_widgets.py +0 -0
  47. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/group_gui.py +0 -0
  48. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/group_gui_config.json +0 -0
  49. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/gui_constants.py +0 -0
  50. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/gui_utils.py +0 -0
  51. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/main_gui.py +0 -0
  52. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/sleap_gui.py +0 -0
  53. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/sleap_gui_config.json +0 -0
  54. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/universal3D_gui.py +0 -0
  55. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/gui/universal3D_gui_config.json +0 -0
  56. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/__init__.py +0 -0
  57. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/constants.py +0 -0
  58. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/folder.png +0 -0
  59. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/icon.icns +0 -0
  60. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/icon.ico +0 -0
  61. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/logo.png +0 -0
  62. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/pic_to_demo_for_repo.png +0 -0
  63. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/resources/utils.py +0 -0
  64. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/sleap/__init__.py +0 -0
  65. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/sleap/sleap_main.py +0 -0
  66. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/__init__.py +0 -0
  67. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_1_preparation.py +0 -0
  68. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_2_sc_extraction.py +0 -0
  69. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_3_analysis.py +0 -0
  70. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_4_plots.py +0 -0
  71. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_constants.py +0 -0
  72. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_datafile_preparation.py +0 -0
  73. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_main.py +0 -0
  74. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita/universal3D/universal3D_utils.py +0 -0
  75. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/dependency_links.txt +0 -0
  76. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/entry_points.txt +0 -0
  77. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/requires.txt +0 -0
  78. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita.egg-info/top_level.txt +0 -0
  79. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/common2D_run_and_done_gui.py +0 -0
  80. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/dlc_1_preparation.py +0 -0
  81. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/dlc_2_sc_extraction.py +0 -0
  82. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/dlc_gui.py +0 -0
  83. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/sleap_1_preparation.py +0 -0
  84. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/sleap_2_sc_extraction.py +0 -0
  85. {autogaita-1.5.4 → autogaita-1.5.5}/autogaita_backup/sleap_gui.py +0 -0
  86. {autogaita-1.5.4 → autogaita-1.5.5}/setup.cfg +0 -0
  87. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_common2D_unit_1_preparation.py +0 -0
  88. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_common2D_unit_2_sc_extraction.py +0 -0
  89. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_common2D_unit_3_analysis.py +0 -0
  90. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_common2D_unit_utils.py +0 -0
  91. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_dlc_approval.py +0 -0
  92. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_dlc_unit_1_preparation.py +0 -0
  93. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_group_approval.py +0 -0
  94. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_group_unit.py +0 -0
  95. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_universal3D_approval.py +0 -0
  96. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_universal3D_unit_1_preparation.py +0 -0
  97. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_universal3D_unit_2_sc_extraction.py +0 -0
  98. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_universal3D_unit_3_analysis.py +0 -0
  99. {autogaita-1.5.4 → autogaita-1.5.5}/tests/test_utils.py +0 -0
@@ -1,9 +1,9 @@
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  Metadata-Version: 2.4
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  Name: autogaita
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- Version: 1.5.4
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+ Version: 1.5.5
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  Summary: Automated Gait (and more!) Analysis in Python
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  Author-email: Mahan Hosseini <autogaita@fz-juelich.de>
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- License: GPLv3
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+ License-Expression: GPL-3.0-only
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  Project-URL: Homepage, https://github.com/mahan-hosseini/AutoGaitA/
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  Project-URL: Documentation, https://docs.google.com/document/d/1iQxSwqBW3VdIXHm-AtV4TGlgpJPDldogVx6qzscsGxA/edit?tab=t.0
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  Project-URL: YouTube, https://youtube.com/playlist?list=PLCn5T7K_H8K56NIcEsfDK664OP7cN_Bad&si=JBEYuzDDRe7qz5Qd
@@ -1,9 +1,9 @@
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  Metadata-Version: 2.4
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  Name: autogaita
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- Version: 1.5.4
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+ Version: 1.5.5
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  Summary: Automated Gait (and more!) Analysis in Python
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  Author-email: Mahan Hosseini <autogaita@fz-juelich.de>
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- License: GPLv3
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+ License-Expression: GPL-3.0-only
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  Project-URL: Homepage, https://github.com/mahan-hosseini/AutoGaitA/
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  Project-URL: Documentation, https://docs.google.com/document/d/1iQxSwqBW3VdIXHm-AtV4TGlgpJPDldogVx6qzscsGxA/edit?tab=t.0
9
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  Project-URL: YouTube, https://youtube.com/playlist?list=PLCn5T7K_H8K56NIcEsfDK664OP7cN_Bad&si=JBEYuzDDRe7qz5Qd
@@ -74,6 +74,7 @@ autogaita/universal3D/universal3D_constants.py
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  autogaita/universal3D/universal3D_datafile_preparation.py
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  autogaita/universal3D/universal3D_main.py
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  autogaita/universal3D/universal3D_utils.py
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+ autogaita_backup/backup_setup.py
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  autogaita_backup/common2D_run_and_done_gui.py
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  autogaita_backup/dlc_1_preparation.py
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  autogaita_backup/dlc_2_sc_extraction.py
@@ -0,0 +1,44 @@
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+ # import
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+ from setuptools import setup, find_packages
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+
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+ # list of across-platform dependencies
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+ install_requires = [
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+ "customtkinter>=5.2",
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+ "pandas>=2.0,<3.0",
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+ "numpy>=1.24",
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+ "seaborn>=0.13",
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+ "matplotlib>=3.7",
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+ "scikit-learn>=1.2",
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+ "pingouin>=0.5",
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+ "scipy>=1.11",
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+ "scikit-bio>=0.7.1",
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+ "statsmodels>=0.14",
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+ "ffmpeg-python>=0.2",
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+ "openpyxl>=3.1",
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+ "pillow>=10.3",
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+ "h5py>=3.11",
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+ "pyobjc; sys_platform == 'darwin'", # Only on macOS
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+ ]
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+
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+ # call setup function
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+ setup(
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+ name="autogaita",
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+ python_requires=">=3.10",
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+ version="1.5.3", # rc == release candidate (before release is finished)
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+ author="Mahan Hosseini",
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+ description="Automatic Gait Analysis in Python.",
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+ long_description="A toolbox to streamline and standardise the analysis of kinematics across species after ML-based body posture tracking. Despite being optimised for gait analyses, AutoGaitA has the potential to be used for any kind of kinematic analysis.",
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+ long_description_content_type="text/plain",
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+ entry_points={
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+ "console_scripts": [
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+ "autogaita = autogaita.gui.main_gui:run_gui",
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+ ],
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+ },
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+ packages=find_packages(),
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+ include_package_data=True,
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+ package_data={"": ["*.txt", "*.rst", "*.png", "*.icns", "*.ico", "*.json"]},
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+ install_requires=install_requires,
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+ extras_require={"dev": ["pytest", "hypothesis"]},
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+ license="GPLv3",
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+ url="https://github.com/mahan-hosseini/AutoGaitA/",
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+ )
@@ -4,12 +4,12 @@ build-backend = "setuptools.build_meta"
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  [project]
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  name = "autogaita"
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- version = "1.5.4" # rc == release candidate
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+ version = "1.5.5" # rc == release candidate
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  authors = [{name = "Mahan Hosseini", email = "autogaita@fz-juelich.de"}]
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  description = "Automated Gait (and more!) Analysis in Python"
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  readme = "README.md"
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  requires-python = ">=3.10"
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- license = {text = "GPLv3"}
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+ license = "GPL-3.0-only"
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  dependencies = [
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  "customtkinter>=5.2",
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  "pandas>=2.0,<3.0",
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