aurelian 0.4.1__tar.gz → 0.4.2__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {aurelian-0.4.1 → aurelian-0.4.2}/PKG-INFO +1 -1
- {aurelian-0.4.1 → aurelian-0.4.2}/pyproject.toml +1 -1
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/ubergraph/ubergraph_tools.py +18 -6
- {aurelian-0.4.1 → aurelian-0.4.2}/LICENSE +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/README.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_evals.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/amigo/amigo_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/biblio_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/biblio_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/biblio_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/biblio_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio/biblio_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/biblio_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/checklist_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/checklist_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/checklist_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/checklist_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/checklist_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/content/checklists.yaml +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist/content/streams.csv +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/checklist_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_evals.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/chemistry_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/chemistry/image_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/d4d_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/d4d_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/d4d_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/d4d_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d/d4d_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/d4d_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_evals.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis/diagnosis_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/diagnosis_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/draw_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/draw_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/draw_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/draw_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/draw_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/draw/judge_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/filesystem_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/filesystem_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/filesystem_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/filesystem_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/filesystem/py.typed +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_cli.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/github/github_tools.py.tmp +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/documents/Transcription_Factors_Annotation_Guidelines.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/documents/Transcription_Factors_Annotation_Guidelines.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/documents/Transcription_Factors_Annotation_Guidelines_Paper.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/documents/Transcription_Factors_Annotation_Guidelines_Paper.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_agent.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_config.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_evals.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_gradio.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/goann/goann_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/DNA-binding transcription factor activity annotation guidelines.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/DNA-binding transcription factor activity annotation guidelines.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/DNA-binding_transcription_factor_activity_annotation_guidelines.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/E3 ubiquitin ligases.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/E3 ubiquitin ligases.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/E3_ubiquitin_ligases.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM annotation guidelines README.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM annotation guidelines README.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM modelling guidelines TO DO.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM modelling guidelines TO DO.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM_annotation_guidelines_README.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/GO-CAM_modelling_guidelines_TO_DO.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate complexes in GO-CAM.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate complexes in GO-CAM.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate molecular adaptors.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate molecular adaptors.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate sequestering proteins.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How to annotate sequestering proteins.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How_to_annotate_complexes_in_GO-CAM.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How_to_annotate_molecular_adaptors.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/How_to_annotate_sequestering_proteins.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular adaptor activity.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular adaptor activity.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular carrier activity.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular carrier activity.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular_adaptor_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Molecular_carrier_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Protein sequestering activity.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Protein sequestering activity.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Protein_sequestering_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Signaling receptor activity annotation guidelines.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Signaling receptor activity annotation guidelines.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Signaling_receptor_activity_annotation_guidelines.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transcription coregulator activity.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transcription coregulator activity.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transcription_coregulator_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transporter activity annotation annotation guidelines.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transporter activity annotation annotation guidelines.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/Transporter_activity_annotation_annotation_guidelines.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/WIP - Regulation and Regulatory Processes in GO-CAM.docx +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/WIP - Regulation and Regulatory Processes in GO-CAM.pdf +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/WIP_-_Regulation_and_Regulatory_Processes_in_GO-CAM.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/DNA-binding_transcription_factor_activity_annotation_guidelines.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/E3_ubiquitin_ligases.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/GO-CAM_annotation_guidelines_README.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/GO-CAM_modelling_guidelines_TO_DO.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/How_to_annotate_complexes_in_GO-CAM.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/How_to_annotate_molecular_adaptors.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/How_to_annotate_sequestering_proteins.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/Molecular_adaptor_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/Molecular_carrier_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/Protein_sequestering_activity.md +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/Signaling_receptor_activity_annotation_guidelines.md +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/md/Transporter_activity_annotation_annotation_guidelines.md +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/documents/pandoc_md/Signaling_receptor_activity_annotation_guidelines.md +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/gocam/gocam_curator_agent.py +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/linkml/__init__.py +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/linkml/linkml_mcp.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/linkml/linkml_tools.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/literature/__init__.py +0 -0
- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/literature/literature_agent.py +0 -0
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- {aurelian-0.4.1 → aurelian-0.4.2}/src/aurelian/agents/monarch/__init__.py +0 -0
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@@ -4,9 +4,9 @@ Tools for interacting with the UberGraph SPARQL endpoint.
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import asyncio
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print("##")
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endpoint,
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data={
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File without changes
|
File without changes
|
File without changes
|