atomistics 0.3.3__tar.gz → 0.3.4__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {atomistics-0.3.3 → atomistics-0.3.4}/PKG-INFO +10 -10
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/_version.py +2 -2
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/phonons/helper.py +2 -2
- {atomistics-0.3.3 → atomistics-0.3.4}/pyproject.toml +9 -9
- {atomistics-0.3.3 → atomistics-0.3.4}/.gitignore +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/LICENSE +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/README.md +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/ase.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/hessian.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/interface.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/commands.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/filecalculator.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/helpers.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/libcalculator.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/phonon.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/lammps/potential.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/qe.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/sphinxdft.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/vasp.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/calculators/wrapper.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/referencedata/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/referencedata/mendeleev.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/referencedata/wikipedia.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/referencedata/wolframalpha.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/import_warning.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/output.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/parallel.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/thermal_expansion.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/shared/tqdm_iterator.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/elastic/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/elastic/elastic_moduli.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/elastic/helper.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/elastic/symmetry.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/elastic/workflow.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/debye.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/fit.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/helper.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/thermo.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/evcurve/workflow.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/interface.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/langevin.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/molecular_dynamics.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/phonons/__init__.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/phonons/units.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/phonons/workflow.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/quasiharmonic.py +0 -0
- {atomistics-0.3.3 → atomistics-0.3.4}/atomistics/workflows/structure_optimization.py +0 -0
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@@ -1,6 +1,6 @@
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Metadata-Version: 2.4
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Name: atomistics
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Version: 0.3.
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Version: 0.3.4
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Summary: Interfaces for atomistic simulation codes and workflows
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Project-URL: Homepage, https://github.com/pyiron/atomistics
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Project-URL: Documentation, https://atomistics.readthedocs.io
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@@ -49,7 +49,7 @@ Classifier: Programming Language :: Python :: 3.13
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Classifier: Topic :: Scientific/Engineering :: Physics
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Requires-Python: <3.15,>=3.9
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Requires-Dist: ase<=3.26.0,>=3.23.0
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Requires-Dist: numpy<=2.3.
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Requires-Dist: numpy<=2.3.5,>=1.26.4
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Requires-Dist: scipy<=1.16.3,>=1.11.2
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Requires-Dist: spglib<=2.6.0,>=2.0.2
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Provides-Extra: experimental
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@@ -62,26 +62,26 @@ Requires-Dist: gpaw<=25.7.0,>=21.6.0; extra == 'gpaw'
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Provides-Extra: lammps
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Requires-Dist: jinja2<=3.1.6,>=2.11.3; extra == 'lammps'
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Requires-Dist: pandas<=2.3.3,>=2.0.3; extra == 'lammps'
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Requires-Dist: pyiron-lammps<=0.4.
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Requires-Dist: pylammpsmpi<=0.3.
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Requires-Dist: pyiron-lammps<=0.4.10,>=0.3.2; extra == 'lammps'
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Requires-Dist: pylammpsmpi<=0.3.7,>=0.2.1; extra == 'lammps'
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Provides-Extra: lammps-phonons
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Requires-Dist: dynaphopy<=1.18.0,>=1.17.11; extra == 'lammps-phonons'
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Requires-Dist: jinja2<=3.1.6,>=2.11.3; extra == 'lammps-phonons'
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Requires-Dist: pandas<=2.3.3,>=2.0.3; extra == 'lammps-phonons'
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Requires-Dist: pyiron-lammps<=0.4.
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Requires-Dist: pylammpsmpi<=0.3.
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Requires-Dist: pyiron-lammps<=0.4.10,>=0.3.2; extra == 'lammps-phonons'
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Requires-Dist: pylammpsmpi<=0.3.7,>=0.2.1; extra == 'lammps-phonons'
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Provides-Extra: phonopy
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Requires-Dist: phonopy<=2.
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Requires-Dist: phonopy<=2.44.0,>=2.20.0; extra == 'phonopy'
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Requires-Dist: seekpath<=2.1.0,>=1.9.0; extra == 'phonopy'
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Requires-Dist: structuretoolkit<=0.0.
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Requires-Dist: structuretoolkit<=0.0.38,>=0.0.10; extra == 'phonopy'
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Provides-Extra: qe
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Requires-Dist: pwtools==1.3.0; extra == 'qe'
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Provides-Extra: sphinxdft
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Requires-Dist: sphinx-parser==0.1.
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Requires-Dist: sphinx-parser==0.1.5; extra == 'sphinxdft'
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Provides-Extra: tqdm
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Requires-Dist: tqdm==4.67.1; extra == 'tqdm'
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Provides-Extra: vasp
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Requires-Dist: pyiron-vasp==0.2.
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Requires-Dist: pyiron-vasp==0.2.16; extra == 'vasp'
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Description-Content-Type: text/markdown
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# atomistics
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commit_id: COMMIT_ID
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__commit_id__: COMMIT_ID
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__version__ = version = '0.3.
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__version_tuple__ = version_tuple = (0, 3,
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__version__ = version = '0.3.4'
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__version_tuple__ = version_tuple = (0, 3, 4)
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__commit_id__ = commit_id = None
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"""
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import matplotlib.pyplot as plt
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dos_energies =
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dos_total =
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dos_energies = phonopy_dict["total_dos_dict"]["frequency_points"]
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dos_total = phonopy_dict["total_dos_dict"]["total_dos"]
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if axis is None:
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_, axis = plt.subplots(1, 1)
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axis.plot(dos_energies, dos_total, *args, **kwargs)
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dependencies = [
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"ase>=3.23.0,<=3.26.0",
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"numpy>=1.26.4,<=2.3.
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"numpy>=1.26.4,<=2.3.5",
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[project.optional-dependencies]
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phonopy = [
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"phonopy>=2.20.0,<=2.
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"phonopy>=2.20.0,<=2.44.0",
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"seekpath>=1.9.0,<=2.1.0",
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"structuretoolkit>=0.0.10,<=0.0.
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"structuretoolkit>=0.0.10,<=0.0.38",
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]
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gpaw = [
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lammps = [
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"pylammpsmpi>=0.2.1,<=0.3.
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"pylammpsmpi>=0.2.1,<=0.3.7",
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"jinja2>=2.11.3,<=3.1.6",
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"pandas>=2.0.3,<=2.3.3",
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"pyiron_lammps>=0.3.2,<=0.4.
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"pyiron_lammps>=0.3.2,<=0.4.10",
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lammps_phonons = [
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experimental = [
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