arraylake 1.1.0__tar.gz → 1.1.1__tar.gz

{arraylake-1.1.0 → arraylake-1.1.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: arraylake
-Version: 1.1.0
+Version: 1.1.1
 Summary: Python client for ArrayLake
 Project-URL: Documentation, https://docs.earthmover.io/
 Project-URL: Changelog, https://docs.earthmover.io/changelog
@@ -14,7 +14,7 @@ Requires-Python: <3.15,>=3.12
 Requires-Dist: click<9.0,>=8.1.3
 Requires-Dist: donfig<1.0,>=0.7
 Requires-Dist: httpx<0.29,>=0.23
-Requires-Dist: icechunk<3.0.0,>=2.0.1
+Requires-Dist: icechunk<3.0.0,>=2.0.6
 Requires-Dist: numpy<3.0,>=1.23
 Requires-Dist: packaging<27.0,>=23.0
 Requires-Dist: pydantic[email]<3.0,>=2.9

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/_version.py

@@ -18,7 +18,7 @@ version_tuple: tuple[int | str, ...]
 commit_id: str | None
 __commit_id__: str | None
 
-__version__ = version = '1.1.0'
-__version_tuple__ = version_tuple = (1, 1, 0)
+__version__ = version = '1.1.1'
+__version_tuple__ = version_tuple = (1, 1, 1)
 
 __commit_id__ = commit_id = None

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/client.py

@@ -45,6 +45,7 @@ from arraylake.metastore import HttpMetastore, HttpMetastoreConfig
 from arraylake.repos.icechunk.storage import (
     _get_credential_type,
     _get_icechunk_storage_obj,
+    apply_bucket_repo_config,
 )
 from arraylake.repos.icechunk.virtual import (
     create_virtual_chunk_container,
@@ -1027,6 +1028,9 @@ class AsyncClient:
                 repo_model, user_id=user.id, storage_options=storage_options
             )
 
+            if repo_model.bucket is not None:
+                config = apply_bucket_repo_config(repo_model.bucket, config)
+
             if authorize_virtual_chunk_access is not None:
                 config = await self._add_virtual_chunk_containers(
                     org=org, user=user, config=config, authorize_virtual_chunk_access=authorize_virtual_chunk_access
@@ -1141,6 +1145,9 @@ class AsyncClient:
                 config = None
                 prefixes_credential_mapping = None
 
+            if repo_model.bucket is not None:
+                config = apply_bucket_repo_config(repo_model.bucket, config)
+
             ic_repo = IcechunkRepository.open(
                 icechunk_storage,
                 config=config,
@@ -1614,7 +1621,8 @@ class AsyncClient:
                 explicit parameters above when possible. Keys set here are overridden
                 by any explicit parameters that are also provided.
             auth_config: Dictionary of auth parameters. Must include a ``"method"`` key.
-                Defaults to ``{"method": "anonymous"}``.
+                Defaults to ``{"method": "anonymous"}``. Anonymous (public) Azure
+                containers must also set ``storage_account`` in this dict.
         """
         validated = NewBucket(
             **self._make_bucket_config(
@@ -2278,7 +2286,8 @@ class Client:
                 explicit parameters above when possible. Keys set here are overridden
                 by any explicit parameters that are also provided.
             auth_config: Dictionary of auth parameters. Must include a ``"method"`` key.
-                Defaults to ``{"method": "anonymous"}``.
+                Defaults to ``{"method": "anonymous"}``. Anonymous (public) Azure
+                containers must also set ``storage_account`` in this dict.
         """
         return sync(
             self.aclient.create_bucket_config,

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/compute/types.py

@@ -56,14 +56,21 @@ class ServiceConfig(BaseModel):
     # If not set, the default is 0, which means functionally no caching, but requests are revalidated.
     cache_max_age: int | None = 0
 
-    # Optional control over icechunk chunk cache size in bytes
+    # Optional control over icechunk chunk cache size in bytes. Override for services whose
+    # single-request working set (e.g. all shards touched by an EDR query) exceeds the default,
+    # otherwise chunks are evicted and re-fetched from object storage on every request.
     icechunk_cache_chunk_bytes: int | None = 1024 * 1024 * 1024
 
     # Optional control over the number of chunk refs icechunk cache
     icechunk_cache_chunk_ref_count: int | None = 10_000_000
 
     # Optional zarr concurrency configuration, the number of concurrent reads zarr will use fulfilling requests
-    zarr_concurrency: int | None = 128
+    zarr_concurrency: int | None = 1000
+
+    # Optional zarr codec pipeline batch size, the number of chunks zarr encodes/decodes per
+    # asyncio task. Zarr's own default of 1 spawns a task per inner chunk when decoding
+    # sharded arrays, which is significantly slower.
+    zarr_codec_pipeline_batch_size: int | None = 256
 
     # Optional zarr threading configuration, the max number of worker threads zarr uses for codec
     # encode/decode. If unset, zarr uses its default of min(32, os.cpu_count() + 4).
@@ -76,6 +83,17 @@ class ServiceConfig(BaseModel):
     # other than DAP2. DAP2 always uses Dask regardless of this setting.
     use_dask: bool = False
 
+    # Optional container resource overrides. When unset, the per-service-type
+    # defaults from the server's ImageConfig are used. Setting any of these
+    # requires the caller to have the CAN_MANAGE_ALL_ORGS service permission;
+    # non-admin callers will be rejected. Values are Kubernetes resource
+    # quantities (e.g. "500m", "4", "8Gi"). Requests drive node selection and
+    # packing; limits cap burst. Set request == limit for Guaranteed QoS.
+    cpu_request: str | None = None
+    cpu_limit: str | None = None
+    memory_request: str | None = None
+    memory_limit: str | None = None
+
     @field_validator("deployment_name")
     @classmethod
     def validate_deployment_name(cls, v: str | None) -> str | None:

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/repos/icechunk/storage.py

@@ -17,7 +17,6 @@ import icechunk
 from arraylake.log_util import get_logger
 from arraylake.types import (
     AzureCredentials,
-    AzureDelegatedCredentialsAuth,
     BucketResponse,
     GSCredentials,
     S3Credentials,
@@ -232,14 +231,22 @@ def _get_icechunk_storage_obj(
 
         assert credentials is None or isinstance(credentials, AzureCredentials)
 
-        if not isinstance(bucket_config.auth_config, AzureDelegatedCredentialsAuth):
-            raise ValueError(f"Invalid auth config for Azure bucket: {bucket_config.auth_config}")
+        # The Azure storage account name lives on the auth config for both delegated and
+        # anonymous Azure buckets (it's needed to resolve the blob endpoint host). Fall
+        # back to the vended credentials if they carry it.
+        storage_account: str | None = getattr(bucket_config.auth_config, "storage_account", None)
+        if not storage_account and credentials is not None:
+            storage_account = credentials.storage_account
+
+        if not storage_account:
+            raise ValueError(f"Could not determine the Azure storage account for bucket {bucket_config.nickname}.")
 
         return icechunk.azure_storage(
-            account=bucket_config.auth_config.storage_account,
+            account=storage_account,
             container=bucket_config.name,
             prefix=prefix or "",
             sas_token=credentials.sas_token if credentials else None,
+            anonymous=credential_type == CredentialType.ANONYMOUS,
             from_env=False,
         )
 
@@ -329,3 +336,31 @@ def create_icechunk_store_config(
 
     else:
         raise ValueError(f"Unsupported bucket platform: {bucket_config.platform}")
+
+
+def apply_bucket_repo_config(
+    bucket_config: BucketResponse,
+    user_config: icechunk.RepositoryConfig | None,
+) -> icechunk.RepositoryConfig | None:
+    """Merge bucket-level icechunk RepositoryConfig flags into a user-supplied config.
+
+    Reads ``unsafe_use_conditional_update`` and ``unsafe_use_conditional_create`` from
+    ``bucket_config.extra_config`` and folds them into a ``RepositoryConfig``. Caller-provided
+    ``user_config`` wins on overlap (icechunk's ``RepositoryConfig.merge`` semantics: fields set on
+    the argument override fields set on the receiver).
+    """
+    extra = bucket_config.extra_config or {}
+    unsafe_update = extra.get("unsafe_use_conditional_update")
+    unsafe_create = extra.get("unsafe_use_conditional_create")
+
+    if unsafe_update is None and unsafe_create is None:
+        return user_config
+
+    bucket_storage = icechunk.StorageSettings(
+        unsafe_use_conditional_update=None if unsafe_update is None else bool(unsafe_update),
+        unsafe_use_conditional_create=None if unsafe_create is None else bool(unsafe_create),
+    )
+    bucket_derived = icechunk.RepositoryConfig(storage=bucket_storage)
+    if user_config is None:
+        return bucket_derived
+    return bucket_derived.merge(user_config)

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/repos/icechunk/types.py

@@ -178,6 +178,7 @@ class ClassifiedArray(BaseModel):
     dimension_names: list[str]
     attributes: dict[str, Any]
     chunk_shape: list[int]
+    shard_shape: list[int] | None = None  # Outer shard shape; None for unsharded arrays
     fill_value: Any = None
     codecs: list[dict[str, Any]] = []  # List of codec configurations
     classification: ArrayClassification

{arraylake-1.1.0 → arraylake-1.1.1}/arraylake/types.py

@@ -448,6 +448,11 @@ class HmacAuth(BaseModel):
 # TODO: Rename to Self Managed
 class AnonymousAuth(BaseModel):
     method: Literal["anonymous"]
+    # Anonymous (public) Azure containers need the storage account name to resolve the
+    # blob endpoint host (<storage_account>.blob.core.windows.net). It's carried here so
+    # the account lives in auth_config for both anonymous and delegated Azure buckets, and
+    # is left None for s3/gcs anonymous buckets. Required for azure (see NewBucket).
+    storage_account: str | None = None
 
 
 AuthConfig: TypeAlias = CustomerManagedRoleAuth | BucketPolicyAuth | HmacAuth | AnonymousAuth
@@ -642,6 +647,12 @@ class BucketModel(BaseModel):
         elif self.platform == "azure":
             if credentials is None:
                 azure_config: AzureConfig = {"skip_signature": True}
+                # Anonymous access still needs the storage account name to resolve the host.
+                # It lives on the (anonymous) auth_config, only present on Bucket subclasses
+                # that carry auth_config, e.g. BucketResponse.
+                account_name = getattr(getattr(self, "auth_config", None), "storage_account", None)
+                if account_name:
+                    azure_config["account_name"] = account_name
             elif isinstance(credentials, AzureCredentials):
                 azure_config = {
                     "sas_key": credentials.sas_token,
@@ -710,6 +721,13 @@ class Bucket(BucketModel):
         return url + "/" if not url.endswith("/") else url
 
 
+def _validate_role_auth_shared_secret(auth_config: AuthConfig | None) -> None:
+    if isinstance(auth_config, AWSCustomerManagedRoleAuth):
+        secret = auth_config.shared_secret
+        if secret is None or not secret.get_secret_value():
+            raise ValueError("AWS customer-managed-role buckets require a shared_secret (used as the STS AssumeRole ExternalId).")
+
+
 class NewBucket(BucketModel):
     """A request to create a new bucket."""
 
@@ -737,6 +755,10 @@ class NewBucket(BucketModel):
         if self.platform == "s3-compatible":
             if "endpoint_url" not in self.extra_config:
                 raise ValueError("S3-compatible buckets require an endpoint_url.")
+        # Anonymous Azure buckets need the storage account name (the blob endpoint host),
+        # which the generic AnonymousAuth only carries optionally.
+        if self.platform == "azure" and isinstance(self.auth_config, AnonymousAuth) and not self.auth_config.storage_account:
+            raise ValueError("Anonymous Azure buckets require a storage_account (the Azure storage account name).")
         return self
 
     @field_validator("auth_config")
@@ -769,6 +791,7 @@ class NewBucket(BucketModel):
                     raise ValueError("R2 customer managed role is only supported for R2 buckets.")
             if auth_config.method == "azure_credential_delegation" and not info.data["platform"] == "azure":
                 raise ValueError("Azure credential delegation is only supported for azure buckets.")
+            _validate_role_auth_shared_secret(auth_config)
         return auth_config if auth_config else None
 
 
@@ -811,6 +834,7 @@ class BucketModifyRequest(BaseModel):
         ]:
             # Deprecating bucket policy method
             raise ValueError("Bucket auth config method must be Anonymous, Customer Managed Role, or HMAC")
+        _validate_role_auth_shared_secret(auth_config)
         return auth_config if auth_config else None
 
 

{arraylake-1.1.0 → arraylake-1.1.1}/pyproject.toml

@@ -35,7 +35,7 @@ dependencies = [
   "click >= 8.1.3, < 9.0",
   "donfig >= 0.7, < 1.0",
   "httpx >= 0.23, < 0.29",
-  "icechunk >= 2.0.1, < 3.0.0",
+  "icechunk >= 2.0.6, < 3.0.0",
   "numpy >= 1.23, < 3.0",
   "packaging>=23.0,<27.0",
   "pydantic[email] >= 2.9, < 3.0",
@@ -65,7 +65,7 @@ dev = [
   "cloudpickle>=3.0,<3.2",
   "hatch>=1.14.2",
   "hypothesis>=6.88.1",
-  "icechunk >= 2.0.1, < 3.0.0",
+  "icechunk >= 2.0.6, < 3.0.0",
   "mypy>=1.11,<3.0",
   "pytest-asyncio>=0.21.1,<1.4.0",
   "pytest-click~=1.1.0",

{arraylake-1.1.0 → arraylake-1.1.1}/tests/conftest.py

@@ -291,6 +291,32 @@ def minio_anon_bucket(default_bucket):
     return minio_anon_bucket_request_constructor
 
 
+@pytest.fixture
+def azure_anon_bucket(default_bucket):
+    """Anonymous (public) Azure container.
+
+    Mirrors the public NOAA Sea Surface Temperature WHOI dataset that icechunk's
+    anonymous-Azure test reads from (earth-mover/icechunk#2173). Azure needs the
+    storage account name (the blob endpoint host) supplied via extra_config since
+    anonymous buckets carry no delegated-credentials auth config.
+    """
+
+    def azure_anon_bucket_request_constructor(
+        *,
+        prefix: BucketPrefix = None,
+    ):
+        return default_bucket(
+            auth_config={"method": "anonymous", "storage_account": "noaacdr"},
+            nickname="azure_anon_bucket",
+            name="sea-surface-temp-whoi",
+            prefix=prefix,
+            platform="azure",
+            extra_config={},
+        )
+
+    return azure_anon_bucket_request_constructor
+
+
 @pytest.fixture
 def delegated_creds_bucket(default_bucket):
     def delegated_creds_bucket_request_constructor(

{arraylake-1.1.0 → arraylake-1.1.1}/tests/icechunk/conftest.py

@@ -91,3 +91,16 @@ def anon_minio_bucket_config() -> BucketResponse:
             "endpoint_url": "http://localhost:9000",
         },
     )
+
+
+@pytest.fixture
+def anon_azure_bucket_config() -> BucketResponse:
+    return BucketResponse(
+        id=uuid4(),
+        platform="azure",
+        nickname="test-azure-anon",
+        name="public-container",
+        auth_config={"method": "anonymous", "storage_account": "publicaccount"},
+        is_default=False,
+        extra_config={},
+    )

{arraylake-1.1.0 → arraylake-1.1.1}/tests/icechunk/test_storage.py

@@ -146,6 +146,22 @@ def test_get_icechunk_storage_obj_gcs_anonymous_credentials(gcs_bucket_config: B
     assert isinstance(storage, icechunk.Storage)
 
 
+def test_get_icechunk_storage_obj_azure_anonymous_credentials(
+    anon_azure_bucket_config: BucketResponse,
+):
+    storage = _get_icechunk_storage_obj(
+        bucket_config=anon_azure_bucket_config,
+        prefix=None,
+        credentials=None,
+        credential_type=CredentialType.ANONYMOUS,
+        credential_refresh_func=None,
+        scatter_initial_credentials=False,
+        arraylake_version=arraylake_version,
+        user_id=uuid.uuid4(),
+    )
+    assert isinstance(storage, icechunk.Storage)
+
+
 def test_get_icechunk_storage_obj_invalid_credential_input(
     s3_bucket_config: BucketResponse,
     s3_credentials: S3Credentials,

{arraylake-1.1.0 → arraylake-1.1.1}/tests/test_client.py

@@ -1599,6 +1599,22 @@ class TestGetObstoreForBucket:
             assert store.config["skip_signature"] == "true"  # type: ignore[comparison-overlap]
             assert store.client_options == {"allow_http": "true"}
 
+    @pytest.mark.parametrize("access", ["read", "write", None])
+    @pytest.mark.asyncio
+    async def test_returns_unsigned_store_for_anonymous_azure_bucket(self, isolated_org, azure_anon_bucket, token, access):
+        import obstore as obs
+
+        async with isolated_org(azure_anon_bucket()) as (org_name, buckets):
+            aclient = AsyncClient(token=token)
+            kwargs = {"org": org_name, "nickname": buckets[0].nickname}
+            if access is not None:
+                kwargs["access"] = access
+            store = await aclient.get_obstore_for_bucket(**kwargs)
+
+            assert isinstance(store, obs.store.AzureStore)
+            assert store.config["skip_signature"] == "true"  # type: ignore[comparison-overlap]
+            assert store.config["account_name"] == "noaacdr"
+
     @pytest.mark.asyncio
     async def test_raises_when_bucket_nickname_does_not_exist(self, isolated_org, token):
         async with isolated_org() as (org_name, _):

{arraylake-1.1.0 → arraylake-1.1.1}/tests/test_types.py

@@ -111,6 +111,18 @@ def test_name_length_limits():
     assert RepoCreateBody(name="a" * MAX_REPO_NAME_LENGTH, bucket_nickname="my-bucket").name == "a" * MAX_REPO_NAME_LENGTH
 
 
+def test_anonymous_azure_bucket_requires_storage_account():
+    # Anonymous Azure buckets must carry the storage account name (s3/gcs don't need it).
+    with pytest.raises(ValidationError, match="Anonymous Azure buckets require a storage_account"):
+        NewBucket(
+            nickname="public-azure",
+            platform="azure",
+            name="public-container",
+            extra_config={},
+            auth_config={"method": "anonymous"},
+        )
+
+
 def test_aws_auth_secret_serialization():
     """Test that AWS auth secrets are obfuscated by default but revealed with context."""
     auth = AWSCustomerManagedRoleAuth(

{arraylake-1.1.0 → arraylake-1.1.1}/uv.lock

@@ -117,7 +117,7 @@ requires-dist = [
     { name = "click", specifier = ">=8.1.3,<9.0" },
     { name = "donfig", specifier = ">=0.7,<1.0" },
     { name = "httpx", specifier = ">=0.23,<0.29" },
-    { name = "icechunk", specifier = ">=2.0.1,<3.0.0" },
+    { name = "icechunk", specifier = ">=2.0.6,<3.0.0" },
     { name = "numpy", specifier = ">=1.23,<3.0" },
     { name = "obstore", marker = "extra == 'obstore'", specifier = ">=0.9.2" },
     { name = "packaging", specifier = ">=23.0,<27.0" },
@@ -138,7 +138,7 @@ dev = [
     { name = "cloudpickle", specifier = ">=3.0,<3.2" },
     { name = "hatch", specifier = ">=1.14.2" },
     { name = "hypothesis", specifier = ">=6.88.1" },
-    { name = "icechunk", specifier = ">=2.0.1,<3.0.0" },
+    { name = "icechunk", specifier = ">=2.0.6,<3.0.0" },
     { name = "mypy", specifier = ">=1.11,<3.0" },
     { name = "pytest", specifier = ">=7.3,<10.0" },
     { name = "pytest-asyncio", specifier = ">=0.21.1,<1.4.0" },
@@ -1045,43 +1045,43 @@ wheels = [
 
 [[package]]
 name = "icechunk"
-version = "2.0.5"
+version = "2.0.6"
 source = { registry = "https://pypi.org/simple" }
 dependencies = [
     { name = "zarr" },
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