arctrl 3.0.0b6__tar.gz → 3.0.0b7__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (464) hide show
  1. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/PKG-INFO +1 -1
  2. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/pyproject.toml +1 -1
  3. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/tool_description.py +2 -2
  4. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/workflow_description.py +2 -2
  5. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/workflow_steps.py +6 -6
  6. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/datamap.py +12 -12
  7. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/validation_packages_config.py +4 -4
  8. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ContractIO/contract_io.py +61 -61
  9. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/factor_value.py +2 -2
  10. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/material_attribute.py +2 -2
  11. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/process.py +20 -20
  12. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/process_sequence.py +41 -41
  13. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/arc_table.py +36 -36
  14. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/arc_tables.py +26 -26
  15. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/composite_column.py +4 -4
  16. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/composite_header.py +2 -2
  17. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/arc_types.py +609 -609
  18. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/conversion.py +38 -38
  19. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/data_file.py +2 -2
  20. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/value.py +8 -8
  21. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/DataMap/data_context.py +24 -24
  22. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/DataMap/data_map.py +6 -6
  23. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/factor.py +19 -19
  24. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/factor_value.py +18 -18
  25. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/material_attribute_value.py +7 -7
  26. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/process_input.py +10 -10
  27. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/protocol_parameter.py +13 -13
  28. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/sample.py +12 -12
  29. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/ROCrate/ldref.py +10 -10
  30. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Table/arc_table.py +85 -85
  31. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Table/cell_table.py +10 -10
  32. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Table/iotype.py +2 -2
  33. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Table/templates.py +65 -65
  34. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/context/rocrate/property_value_context.py +4 -4
  35. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/context/rocrate/rocrate_context.py +10 -10
  36. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/converter_options.py +2 -2
  37. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/data_file.py +8 -8
  38. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/decode.py +14 -14
  39. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/encode.py +16 -16
  40. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/investigation.py +190 -190
  41. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/person.py +164 -164
  42. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/property_value.py +24 -24
  43. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/publication.py +17 -17
  44. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/run.py +30 -30
  45. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/study.py +33 -33
  46. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/Generic/dataset.py +18 -18
  47. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/ISAProfile/lab_process.py +10 -10
  48. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/ISAProfile/lab_protocol.py +2 -2
  49. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/ISAProfile/person.py +2 -2
  50. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/ISAProfile/sample.py +4 -4
  51. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/ISAProfile/scholarly_article.py +4 -4
  52. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ROCrate/arc_rocrate_metadata.py +2 -2
  53. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/AnnotationTable/composite_cell.py +12 -12
  54. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/DataMapTable/data_map_column.py +23 -23
  55. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/DataMapTable/data_map_header.py +8 -8
  56. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/assays.py +8 -8
  57. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/contacts.py +10 -10
  58. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/ontology_annotation.py +8 -8
  59. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/ontology_source_reference.py +8 -8
  60. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/protocols.py +9 -9
  61. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/publication.py +10 -10
  62. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/run.py +6 -6
  63. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/sparse_table.py +9 -9
  64. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/study.py +32 -32
  65. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Spreadsheet/Metadata/workflow.py +6 -6
  66. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/arc.py +206 -206
  67. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Cells/fs_cell.py +2 -2
  68. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +29 -29
  69. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/DSL/types.py +2 -2
  70. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range.py +2 -2
  71. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +2 -2
  72. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +2 -2
  73. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_column.py +2 -2
  74. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +2 -2
  75. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +2 -2
  76. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/fable_modules/thoth_json_core/decode.py +79 -79
  77. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/json.py +49 -18
  78. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/template_web.py +4 -4
  79. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/xlsx.py +14 -14
  80. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/LICENSE +0 -0
  81. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/README.md +0 -0
  82. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/__init__.py +0 -0
  83. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/__init__.py +0 -0
  84. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/cwltypes.py +0 -0
  85. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/decode.py +0 -0
  86. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/encode.py +0 -0
  87. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/inputs.py +0 -0
  88. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/outputs.py +0 -0
  89. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/CWL/requirements.py +0 -0
  90. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/__init__.py +0 -0
  91. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc.py +0 -0
  92. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc_assay.py +0 -0
  93. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc_investigation.py +0 -0
  94. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc_run.py +0 -0
  95. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc_study.py +0 -0
  96. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/arc_workflow.py +0 -0
  97. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/contract.py +0 -0
  98. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/git.py +0 -0
  99. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Contract/license.py +0 -0
  100. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ContractIO/__init__.py +0 -0
  101. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/ContractIO/file_system_helper.py +0 -0
  102. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/__init__.py +0 -0
  103. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/collections_.py +0 -0
  104. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/date_time.py +0 -0
  105. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/hash_codes.py +0 -0
  106. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/identifier.py +0 -0
  107. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/orcid.py +0 -0
  108. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/printer.py +0 -0
  109. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/regex.py +0 -0
  110. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/sem_ver.py +0 -0
  111. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Helper/url.py +0 -0
  112. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/__init__.py +0 -0
  113. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/column_index.py +0 -0
  114. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/component.py +0 -0
  115. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/factor.py +0 -0
  116. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/material.py +0 -0
  117. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/material_attribute_value.py +0 -0
  118. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/material_type.py +0 -0
  119. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/process_input.py +0 -0
  120. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/process_output.py +0 -0
  121. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/process_parameter_value.py +0 -0
  122. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/protocol.py +0 -0
  123. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/protocol_parameter.py +0 -0
  124. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/sample.py +0 -0
  125. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Process/source.py +0 -0
  126. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/__init__.py +0 -0
  127. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/arc_table_aux.py +0 -0
  128. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/Table/composite_cell.py +0 -0
  129. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/__init__.py +0 -0
  130. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/comment.py +0 -0
  131. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/comment_list.py +0 -0
  132. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/data.py +0 -0
  133. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/data_context.py +0 -0
  134. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/data_map.py +0 -0
  135. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/identifier_setters.py +0 -0
  136. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/iproperty_value.py +0 -0
  137. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/ontology_annotation.py +0 -0
  138. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/ontology_source_reference.py +0 -0
  139. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/person.py +0 -0
  140. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/publication.py +0 -0
  141. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/template.py +0 -0
  142. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/templates.py +0 -0
  143. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Core/uri.py +0 -0
  144. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/__init__.py +0 -0
  145. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/commit.py +0 -0
  146. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/default_gitattributes.py +0 -0
  147. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/default_gitignore.py +0 -0
  148. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/default_license.py +0 -0
  149. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/file_system.py +0 -0
  150. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/file_system_tree.py +0 -0
  151. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/FileSystem/path.py +0 -0
  152. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/DataMap/__init__.py +0 -0
  153. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/__init__.py +0 -0
  154. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/assay_materials.py +0 -0
  155. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/component.py +0 -0
  156. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/material.py +0 -0
  157. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/material_attribute.py +0 -0
  158. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/material_type.py +0 -0
  159. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/process.py +0 -0
  160. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/process_output.py +0 -0
  161. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/process_parameter_value.py +0 -0
  162. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/protocol.py +0 -0
  163. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/source.py +0 -0
  164. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/study_materials.py +0 -0
  165. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/Process/value.py +0 -0
  166. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/ROCrate/__init__.py +0 -0
  167. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/ROCrate/ldcontext.py +0 -0
  168. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/ROCrate/ldgraph.py +0 -0
  169. {arctrl-3.0.0b6 → arctrl-3.0.0b7}/src/ARCtrl/py/Json/ROCrate/ldnode.py +0 -0
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@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: arctrl
3
- Version: 3.0.0b6
3
+ Version: 3.0.0b7
4
4
  Summary: Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtimer agnostic contract systems.
5
5
  License-File: LICENSE
6
6
  Keywords: arc,annotated research context,isa,research data,multi platform
@@ -1,6 +1,6 @@
1
1
  [project]
2
2
  name = "arctrl"
3
- version = "3.0.0b6"
3
+ version = "3.0.0b7"
4
4
  description = "Library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtimer agnostic contract systems."
5
5
  authors = [
6
6
  { name = "Heinrich Lukas Weil", email = "weil@rptu.de" },
@@ -7,7 +7,7 @@ from .inputs import CWLInput
7
7
  from .outputs import CWLOutput
8
8
  from .requirements import Requirement
9
9
 
10
- def _expr3492() -> TypeInfo:
10
+ def _expr3371() -> TypeInfo:
11
11
  return class_type("ARCtrl.CWL.CWLToolDescription", None, CWLToolDescription, DynamicObj_reflection())
12
12
 
13
13
 
@@ -93,7 +93,7 @@ class CWLToolDescription(DynamicObj):
93
93
  this._metadata = metadata
94
94
 
95
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96
- CWLToolDescription_reflection = _expr3492
96
+ CWLToolDescription_reflection = _expr3371
97
97
 
98
98
  def CWLToolDescription__ctor_Z3224DB85(outputs: Array[CWLOutput], cwl_version: str | None=None, base_command: Array[str] | None=None, requirements: Array[Requirement] | None=None, hints: Array[Requirement] | None=None, inputs: Array[CWLInput] | None=None, metadata: DynamicObj | None=None) -> CWLToolDescription:
99
99
  return CWLToolDescription(outputs, cwl_version, base_command, requirements, hints, inputs, metadata)
@@ -8,7 +8,7 @@ from .outputs import CWLOutput
8
8
  from .requirements import Requirement
9
9
  from .workflow_steps import WorkflowStep
10
10
 
11
- def _expr3493() -> TypeInfo:
11
+ def _expr3447() -> TypeInfo:
12
12
  return class_type("ARCtrl.CWL.CWLWorkflowDescription", None, CWLWorkflowDescription, DynamicObj_reflection())
13
13
 
14
14
 
@@ -94,7 +94,7 @@ class CWLWorkflowDescription(DynamicObj):
94
94
  this._metadata = metadata
95
95
 
96
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97
- CWLWorkflowDescription_reflection = _expr3493
97
+ CWLWorkflowDescription_reflection = _expr3447
98
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99
99
  def CWLWorkflowDescription__ctor_704BBD06(steps: Array[WorkflowStep], inputs: Array[CWLInput], outputs: Array[CWLOutput], cwl_version: str | None=None, requirements: Array[Requirement] | None=None, hints: Array[Requirement] | None=None, metadata: DynamicObj | None=None) -> CWLWorkflowDescription:
100
100
  return CWLWorkflowDescription(steps, inputs, outputs, cwl_version, requirements, hints, metadata)
@@ -5,7 +5,7 @@ from ..fable_modules.fable_library.reflection import (TypeInfo, string_type, opt
5
5
  from ..fable_modules.fable_library.types import (Record, Array)
6
6
  from .requirements import Requirement
7
7
 
8
- def _expr3376() -> TypeInfo:
8
+ def _expr3342() -> TypeInfo:
9
9
  return record_type("ARCtrl.CWL.StepInput", [], StepInput, lambda: [("Id", string_type), ("Source", option_type(string_type)), ("DefaultValue", option_type(string_type)), ("ValueFrom", option_type(string_type))])
10
10
 
11
11
 
@@ -16,9 +16,9 @@ class StepInput(Record):
16
16
  DefaultValue: str | None
17
17
  ValueFrom: str | None
18
18
 
19
- StepInput_reflection = _expr3376
19
+ StepInput_reflection = _expr3342
20
20
 
21
- def _expr3385() -> TypeInfo:
21
+ def _expr3343() -> TypeInfo:
22
22
  return record_type("ARCtrl.CWL.StepOutput", [], StepOutput, lambda: [("Id", array_type(string_type))])
23
23
 
24
24
 
@@ -26,9 +26,9 @@ def _expr3385() -> TypeInfo:
26
26
  class StepOutput(Record):
27
27
  Id: Array[str]
28
28
 
29
- StepOutput_reflection = _expr3385
29
+ StepOutput_reflection = _expr3343
30
30
 
31
- def _expr3399() -> TypeInfo:
31
+ def _expr3344() -> TypeInfo:
32
32
  return class_type("ARCtrl.CWL.WorkflowStep", None, WorkflowStep, DynamicObj_reflection())
33
33
 
34
34
 
@@ -103,7 +103,7 @@ class WorkflowStep(DynamicObj):
103
103
  this._hints = hints
104
104
 
105
105
 
106
- WorkflowStep_reflection = _expr3399
106
+ WorkflowStep_reflection = _expr3344
107
107
 
108
108
  def WorkflowStep__ctor_4159DCB0(id: str, in_: Array[StepInput], out_: StepOutput, run: str, requirements: Array[Requirement] | None=None, hints: Array[Requirement] | None=None) -> WorkflowStep:
109
109
  return WorkflowStep(id, in_, out_, run, requirements, hints)
@@ -12,10 +12,10 @@ from .contract import (Contract, DTOType, DTO)
12
12
 
13
13
  def _007CDatamapPath_007C__007C(input: Array[str]) -> str | None:
14
14
  (pattern_matching_result,) = (None,)
15
- def _arrow3611(x: str, y: str, input: Any=input) -> bool:
15
+ def _arrow3612(x: str, y: str, input: Any=input) -> bool:
16
16
  return x == y
17
17
 
18
- if (len(input) == 3) if (not equals_with(_arrow3611, input, None)) else False:
18
+ if (len(input) == 3) if (not equals_with(_arrow3612, input, None)) else False:
19
19
  if input[0] == "assays":
20
20
  if input[2] == "isa.datamap.xlsx":
21
21
  pattern_matching_result = 0
@@ -68,17 +68,17 @@ def ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5(this: DataMap, as
68
68
 
69
69
 
70
70
  def ARCtrl_DataMap__DataMap_toDeleteContractForAssay_Static_Z721C83C5(assay_identifier: str) -> Callable[[DataMap], Contract]:
71
- def _arrow3612(data_map: DataMap, assay_identifier: Any=assay_identifier) -> Contract:
71
+ def _arrow3614(data_map: DataMap, assay_identifier: Any=assay_identifier) -> Contract:
72
72
  return ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5(data_map, assay_identifier)
73
73
 
74
- return _arrow3612
74
+ return _arrow3614
75
75
 
76
76
 
77
77
  def ARCtrl_DataMap__DataMap_toUpdateContractForAssay_Static_Z721C83C5(assay_identifier: str) -> Callable[[DataMap], Contract]:
78
- def _arrow3613(data_map: DataMap, assay_identifier: Any=assay_identifier) -> Contract:
78
+ def _arrow3615(data_map: DataMap, assay_identifier: Any=assay_identifier) -> Contract:
79
79
  return ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5(data_map, assay_identifier)
80
80
 
81
- return _arrow3613
81
+ return _arrow3615
82
82
 
83
83
 
84
84
  def ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assay_identifier: str, c: Contract) -> DataMap | None:
@@ -89,11 +89,11 @@ def ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assay_identifier:
89
89
  if c.DTOType.tag == 5:
90
90
  if c.DTO is not None:
91
91
  if c.DTO.tag == 0:
92
- def _arrow3614(__unit: None=None, assay_identifier: Any=assay_identifier, c: Any=c) -> bool:
92
+ def _arrow3616(__unit: None=None, assay_identifier: Any=assay_identifier, c: Any=c) -> bool:
93
93
  fsworkbook: Any = c.DTO.fields[0]
94
94
  return c.Path == path
95
95
 
96
- if _arrow3614():
96
+ if _arrow3616():
97
97
  pattern_matching_result = 0
98
98
  fsworkbook_1 = c.DTO.fields[0]
99
99
  p_1 = c.Path
@@ -147,17 +147,17 @@ def ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5(this: DataMap, st
147
147
 
148
148
 
149
149
  def ARCtrl_DataMap__DataMap_toDeleteContractForStudy_Static_Z721C83C5(study_identifier: str) -> Callable[[DataMap], Contract]:
150
- def _arrow3616(data_map: DataMap, study_identifier: Any=study_identifier) -> Contract:
150
+ def _arrow3617(data_map: DataMap, study_identifier: Any=study_identifier) -> Contract:
151
151
  return ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5(data_map, study_identifier)
152
152
 
153
- return _arrow3616
153
+ return _arrow3617
154
154
 
155
155
 
156
156
  def ARCtrl_DataMap__DataMap_toUpdateContractForStudy_Static_Z721C83C5(study_identifier: str) -> Callable[[DataMap], Contract]:
157
- def _arrow3617(data_map: DataMap, study_identifier: Any=study_identifier) -> Contract:
157
+ def _arrow3618(data_map: DataMap, study_identifier: Any=study_identifier) -> Contract:
158
158
  return ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5(data_map, study_identifier)
159
159
 
160
- return _arrow3617
160
+ return _arrow3618
161
161
 
162
162
 
163
163
  def ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static(study_identifier: str, c: Contract) -> DataMap | None:
@@ -13,10 +13,10 @@ ValidationPackagesConfigHelper_ReadContract: Contract = Contract("READ", Validat
13
13
 
14
14
  def ValidationPackagesConfigExtensions__007CValidationPackagesYamlPath_007C__007C(input: Array[str]) -> str | None:
15
15
  (pattern_matching_result,) = (None,)
16
- def _arrow3615(x: str, y: str, input: Any=input) -> bool:
16
+ def _arrow3611(x: str, y: str, input: Any=input) -> bool:
17
17
  return x == y
18
18
 
19
- if (len(input) == 2) if (not equals_with(_arrow3615, input, None)) else False:
19
+ if (len(input) == 2) if (not equals_with(_arrow3611, input, None)) else False:
20
20
  if input[0] == ".arc":
21
21
  if input[1] == "validation_packages.yml":
22
22
  pattern_matching_result = 0
@@ -63,11 +63,11 @@ def ARCtrl_ValidationPackages_ValidationPackagesConfig__ValidationPackagesConfig
63
63
  if c.DTOType.tag == 9:
64
64
  if c.DTO is not None:
65
65
  if c.DTO.tag == 1:
66
- def _arrow3618(__unit: None=None, c: Any=c) -> bool:
66
+ def _arrow3613(__unit: None=None, c: Any=c) -> bool:
67
67
  yaml: str = c.DTO.fields[0]
68
68
  return c.Path == ValidationPackagesConfigHelper_ConfigFilePath
69
69
 
70
- if _arrow3618():
70
+ if _arrow3613():
71
71
  pattern_matching_result = 0
72
72
  p_1 = c.Path
73
73
  yaml_1 = c.DTO.fields[0]
@@ -15,14 +15,14 @@ from .file_system_helper import (read_file_xlsx_async, read_file_text_async, ens
15
15
 
16
16
  def fulfill_read_contract_async(base_path: str, c: Contract) -> Async[FSharpResult_2[Contract, str]]:
17
17
  def f(e_1: Exception, base_path: Any=base_path, c: Any=c) -> FSharpResult_2[Contract, str]:
18
- def _arrow3807(__unit: None=None, e_1: Any=e_1) -> str:
18
+ def _arrow3809(__unit: None=None, e_1: Any=e_1) -> str:
19
19
  arg_4: str = str(e_1)
20
20
  return to_text(printf("Error reading contract %s: %s"))(c.Path)(arg_4)
21
21
 
22
- return FSharpResult_2(1, _arrow3807())
22
+ return FSharpResult_2(1, _arrow3809())
23
23
 
24
- def _arrow3813(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
25
- def _arrow3810(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
24
+ def _arrow3815(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
25
+ def _arrow3812(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
26
26
  match_value: DTOType | None = c.DTOType
27
27
  (pattern_matching_result,) = (None,)
28
28
  if match_value is not None:
@@ -56,37 +56,37 @@ def fulfill_read_contract_async(base_path: str, c: Contract) -> Async[FSharpResu
56
56
 
57
57
  if pattern_matching_result == 0:
58
58
  path: str = combine(base_path, c.Path)
59
- def _arrow3808(_arg: FsWorkbook) -> Async[FSharpResult_2[Contract, str]]:
59
+ def _arrow3810(_arg: FsWorkbook) -> Async[FSharpResult_2[Contract, str]]:
60
60
  return singleton.Return(FSharpResult_2(0, Contract(c.Operation, c.Path, c.DTOType, DTO_2(0, _arg))))
61
61
 
62
- return singleton.Bind(read_file_xlsx_async(path), _arrow3808)
62
+ return singleton.Bind(read_file_xlsx_async(path), _arrow3810)
63
63
 
64
64
  elif pattern_matching_result == 1:
65
65
  path_1: str = combine(base_path, c.Path)
66
- def _arrow3809(_arg_1: str) -> Async[FSharpResult_2[Contract, str]]:
66
+ def _arrow3811(_arg_1: str) -> Async[FSharpResult_2[Contract, str]]:
67
67
  return singleton.Return(FSharpResult_2(0, Contract(c.Operation, c.Path, c.DTOType, DTO_2(1, _arg_1))))
68
68
 
69
- return singleton.Bind(read_file_text_async(path_1), _arrow3809)
69
+ return singleton.Bind(read_file_text_async(path_1), _arrow3811)
70
70
 
71
71
  elif pattern_matching_result == 2:
72
72
  return singleton.Return(FSharpResult_2(1, to_text(printf("Contract %s is neither an ISA nor a freetext contract"))(c.Path)))
73
73
 
74
74
 
75
- def _arrow3812(_arg_2: Exception) -> Async[FSharpResult_2[Contract, str]]:
76
- def _arrow3811(__unit: None=None) -> str:
75
+ def _arrow3814(_arg_2: Exception) -> Async[FSharpResult_2[Contract, str]]:
76
+ def _arrow3813(__unit: None=None) -> str:
77
77
  arg_2: str = str(_arg_2)
78
78
  return to_text(printf("Error reading contract %s: %s"))(c.Path)(arg_2)
79
79
 
80
- return singleton.Return(FSharpResult_2(1, _arrow3811()))
80
+ return singleton.Return(FSharpResult_2(1, _arrow3813()))
81
81
 
82
- return singleton.TryWith(singleton.Delay(_arrow3810), _arrow3812)
82
+ return singleton.TryWith(singleton.Delay(_arrow3812), _arrow3814)
83
83
 
84
- return catch_with(f, singleton.Delay(_arrow3813))
84
+ return catch_with(f, singleton.Delay(_arrow3815))
85
85
 
86
86
 
87
87
  def fullfill_contract_batch_async_by(contract_f: Callable[[str, Contract], Async[FSharpResult_2[Contract, str]]], base_path: str, cs: Array[Contract]) -> Async[FSharpResult_2[Array[Contract], Array[str]]]:
88
- def _arrow3815(__unit: None=None, contract_f: Any=contract_f, base_path: Any=base_path, cs: Any=cs) -> Async[FSharpResult_2[Array[Contract], Array[str]]]:
89
- def _arrow3814(_arg: Array[FSharpResult_2[Contract, str]]) -> Async[FSharpResult_2[Array[Contract], Array[str]]]:
88
+ def _arrow3817(__unit: None=None, contract_f: Any=contract_f, base_path: Any=base_path, cs: Any=cs) -> Async[FSharpResult_2[Array[Contract], Array[str]]]:
89
+ def _arrow3816(_arg: Array[FSharpResult_2[Contract, str]]) -> Async[FSharpResult_2[Array[Contract], Array[str]]]:
90
90
  def folder(acc: FSharpResult_2[Array[Contract], Array[str]], cr: FSharpResult_2[Contract, str]) -> FSharpResult_2[Array[Contract], Array[str]]:
91
91
  copy_of_struct: FSharpResult_2[Array[Contract], Array[str]] = acc
92
92
  if copy_of_struct.tag == 1:
@@ -111,136 +111,136 @@ def fullfill_contract_batch_async_by(contract_f: Callable[[str, Contract], Async
111
111
  res: FSharpResult_2[Array[Contract], Array[str]] = fold(folder, FSharpResult_2(0, []), _arg)
112
112
  return singleton.Return(res)
113
113
 
114
- return singleton.Bind(start_sequential(curry2(contract_f)(base_path), cs), _arrow3814)
114
+ return singleton.Bind(start_sequential(curry2(contract_f)(base_path), cs), _arrow3816)
115
115
 
116
- return singleton.Delay(_arrow3815)
116
+ return singleton.Delay(_arrow3817)
117
117
 
118
118
 
119
119
  def fulfill_write_contract_async(base_path: str, c: Contract) -> Async[FSharpResult_2[Contract, str]]:
120
120
  def f(e_1: Exception, base_path: Any=base_path, c: Any=c) -> FSharpResult_2[Contract, str]:
121
- def _arrow3816(__unit: None=None, e_1: Any=e_1) -> str:
121
+ def _arrow3818(__unit: None=None, e_1: Any=e_1) -> str:
122
122
  arg_4: str = str(e_1)
123
123
  return to_text(printf("Error writing contract %s: %s"))(c.Path)(arg_4)
124
124
 
125
- return FSharpResult_2(1, _arrow3816())
125
+ return FSharpResult_2(1, _arrow3818())
126
126
 
127
- def _arrow3826(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
128
- def _arrow3823(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
127
+ def _arrow3828(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
128
+ def _arrow3825(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
129
129
  match_value: DTO_2 | None = c.DTO
130
130
  if match_value is None:
131
131
  path_2: str = combine(base_path, c.Path)
132
- def _arrow3818(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
133
- def _arrow3817(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
132
+ def _arrow3820(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
133
+ def _arrow3819(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
134
134
  return singleton.Return(FSharpResult_2(0, c))
135
135
 
136
- return singleton.Bind(write_file_text_async(path_2, ""), _arrow3817)
136
+ return singleton.Bind(write_file_text_async(path_2, ""), _arrow3819)
137
137
 
138
- return singleton.Bind(ensure_directory_of_file_async(path_2), _arrow3818)
138
+ return singleton.Bind(ensure_directory_of_file_async(path_2), _arrow3820)
139
139
 
140
140
  elif match_value.tag == 1:
141
141
  t: str = match_value.fields[0]
142
142
  path: str = combine(base_path, c.Path)
143
- def _arrow3820(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
144
- def _arrow3819(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
143
+ def _arrow3822(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
144
+ def _arrow3821(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
145
145
  return singleton.Return(FSharpResult_2(0, c))
146
146
 
147
- return singleton.Bind(write_file_text_async(path, t), _arrow3819)
147
+ return singleton.Bind(write_file_text_async(path, t), _arrow3821)
148
148
 
149
- return singleton.Bind(ensure_directory_of_file_async(path), _arrow3820)
149
+ return singleton.Bind(ensure_directory_of_file_async(path), _arrow3822)
150
150
 
151
151
  elif match_value.tag == 0:
152
152
  wb: Any = match_value.fields[0]
153
153
  path_1: str = combine(base_path, c.Path)
154
- def _arrow3822(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
155
- def _arrow3821(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
154
+ def _arrow3824(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
155
+ def _arrow3823(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
156
156
  return singleton.Return(FSharpResult_2(0, c))
157
157
 
158
- return singleton.Bind(write_file_xlsx_async(path_1, wb), _arrow3821)
158
+ return singleton.Bind(write_file_xlsx_async(path_1, wb), _arrow3823)
159
159
 
160
- return singleton.Bind(ensure_directory_of_file_async(path_1), _arrow3822)
160
+ return singleton.Bind(ensure_directory_of_file_async(path_1), _arrow3824)
161
161
 
162
162
  else:
163
163
  return singleton.Return(FSharpResult_2(1, to_text(printf("Contract %s is not an ISA contract"))(c.Path)))
164
164
 
165
165
 
166
- def _arrow3825(_arg_6: Exception) -> Async[FSharpResult_2[Contract, str]]:
167
- def _arrow3824(__unit: None=None) -> str:
166
+ def _arrow3827(_arg_6: Exception) -> Async[FSharpResult_2[Contract, str]]:
167
+ def _arrow3826(__unit: None=None) -> str:
168
168
  arg_2: str = str(_arg_6)
169
169
  return to_text(printf("Error writing contract %s: %s"))(c.Path)(arg_2)
170
170
 
171
- return singleton.Return(FSharpResult_2(1, _arrow3824()))
171
+ return singleton.Return(FSharpResult_2(1, _arrow3826()))
172
172
 
173
- return singleton.TryWith(singleton.Delay(_arrow3823), _arrow3825)
173
+ return singleton.TryWith(singleton.Delay(_arrow3825), _arrow3827)
174
174
 
175
- return catch_with(f, singleton.Delay(_arrow3826))
175
+ return catch_with(f, singleton.Delay(_arrow3828))
176
176
 
177
177
 
178
178
  def fulfill_update_contract_async(base_path: str, c: Contract) -> Async[FSharpResult_2[Contract, str]]:
179
179
  def f(e_1: Exception, base_path: Any=base_path, c: Any=c) -> FSharpResult_2[Contract, str]:
180
- def _arrow3827(__unit: None=None, e_1: Any=e_1) -> str:
180
+ def _arrow3829(__unit: None=None, e_1: Any=e_1) -> str:
181
181
  arg_4: str = str(e_1)
182
182
  return to_text(printf("Error updating contract %s: %s"))(c.Path)(arg_4)
183
183
 
184
- return FSharpResult_2(1, _arrow3827())
184
+ return FSharpResult_2(1, _arrow3829())
185
185
 
186
- def _arrow3837(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
187
- def _arrow3834(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
186
+ def _arrow3839(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
187
+ def _arrow3836(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
188
188
  match_value: DTO_2 | None = c.DTO
189
189
  if match_value is None:
190
190
  path_2: str = combine(base_path, c.Path)
191
- def _arrow3829(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
192
- def _arrow3828(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
191
+ def _arrow3831(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
192
+ def _arrow3830(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
193
193
  return singleton.Return(FSharpResult_2(0, c))
194
194
 
195
- return singleton.Bind(write_file_text_async(path_2, ""), _arrow3828)
195
+ return singleton.Bind(write_file_text_async(path_2, ""), _arrow3830)
196
196
 
197
- return singleton.Bind(ensure_directory_of_file_async(path_2), _arrow3829)
197
+ return singleton.Bind(ensure_directory_of_file_async(path_2), _arrow3831)
198
198
 
199
199
  elif match_value.tag == 1:
200
200
  t: str = match_value.fields[0]
201
201
  path: str = combine(base_path, c.Path)
202
- def _arrow3831(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
203
- def _arrow3830(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
202
+ def _arrow3833(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
203
+ def _arrow3832(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
204
204
  return singleton.Return(FSharpResult_2(0, c))
205
205
 
206
- return singleton.Bind(write_file_text_async(path, t), _arrow3830)
206
+ return singleton.Bind(write_file_text_async(path, t), _arrow3832)
207
207
 
208
- return singleton.Bind(ensure_directory_of_file_async(path), _arrow3831)
208
+ return singleton.Bind(ensure_directory_of_file_async(path), _arrow3833)
209
209
 
210
210
  elif match_value.tag == 0:
211
211
  wb: Any = match_value.fields[0]
212
212
  path_1: str = combine(base_path, c.Path)
213
- def _arrow3833(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
214
- def _arrow3832(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
213
+ def _arrow3835(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
214
+ def _arrow3834(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
215
215
  return singleton.Return(FSharpResult_2(0, c))
216
216
 
217
- return singleton.Bind(write_file_xlsx_async(path_1, wb), _arrow3832)
217
+ return singleton.Bind(write_file_xlsx_async(path_1, wb), _arrow3834)
218
218
 
219
- return singleton.Bind(ensure_directory_of_file_async(path_1), _arrow3833)
219
+ return singleton.Bind(ensure_directory_of_file_async(path_1), _arrow3835)
220
220
 
221
221
  else:
222
222
  return singleton.Return(FSharpResult_2(1, to_text(printf("Contract %s is not an ISA contract"))(c.Path)))
223
223
 
224
224
 
225
- def _arrow3836(_arg_6: Exception) -> Async[FSharpResult_2[Contract, str]]:
226
- def _arrow3835(__unit: None=None) -> str:
225
+ def _arrow3838(_arg_6: Exception) -> Async[FSharpResult_2[Contract, str]]:
226
+ def _arrow3837(__unit: None=None) -> str:
227
227
  arg_2: str = str(_arg_6)
228
228
  return to_text(printf("Error updating contract %s: %s"))(c.Path)(arg_2)
229
229
 
230
- return singleton.Return(FSharpResult_2(1, _arrow3835()))
230
+ return singleton.Return(FSharpResult_2(1, _arrow3837()))
231
231
 
232
- return singleton.TryWith(singleton.Delay(_arrow3834), _arrow3836)
232
+ return singleton.TryWith(singleton.Delay(_arrow3836), _arrow3838)
233
233
 
234
- return catch_with(f, singleton.Delay(_arrow3837))
234
+ return catch_with(f, singleton.Delay(_arrow3839))
235
235
 
236
236
 
237
237
  def fullfill_rename_contract_async(base_path: str, c: Contract) -> Async[FSharpResult_2[Contract, str]]:
238
238
  def f(e_1: Exception, base_path: Any=base_path, c: Any=c) -> FSharpResult_2[Contract, str]:
239
- def _arrow3838(__unit: None=None, e_1: Any=e_1) -> str:
239
+ def _arrow3840(__unit: None=None, e_1: Any=e_1) -> str:
240
240
  arg_5: str = str(e_1)
241
241
  return to_text(printf("Error renaming contract %s: %s"))(c.Path)(arg_5)
242
242
 
243
- return FSharpResult_2(1, _arrow3838())
243
+ return FSharpResult_2(1, _arrow3840())
244
244
 
245
245
  def _arrow3845(__unit: None=None, base_path: Any=base_path, c: Any=c) -> Async[FSharpResult_2[Contract, str]]:
246
246
  def _arrow3842(__unit: None=None) -> Async[FSharpResult_2[Contract, str]]:
@@ -150,7 +150,7 @@ def FactorValue__MapCategory_658CFBF6(this: FactorValue, f: Callable[[OntologyAn
150
150
 
151
151
 
152
152
  def FactorValue__SetCategory_ZDED3A0F(this: FactorValue, c: OntologyAnnotation) -> FactorValue:
153
- def _arrow583(__unit: None=None, this: Any=this, c: Any=c) -> Factor | None:
153
+ def _arrow584(__unit: None=None, this: Any=this, c: Any=c) -> Factor | None:
154
154
  match_value: Factor | None = this.Category
155
155
  if match_value is None:
156
156
  return Factor.create(None, c)
@@ -160,7 +160,7 @@ def FactorValue__SetCategory_ZDED3A0F(this: FactorValue, c: OntologyAnnotation)
160
160
  return p.SetCategory(c)
161
161
 
162
162
 
163
- return FactorValue(this.ID, _arrow583(), this.Value, this.Unit)
163
+ return FactorValue(this.ID, _arrow584(), this.Value, this.Unit)
164
164
 
165
165
 
166
166
  def FactorValue_getNameAsString_7105C732(fv: FactorValue) -> str:
@@ -9,7 +9,7 @@ from ..comment import Comment
9
9
  from ..Helper.collections_ import Option_fromValueWithDefault
10
10
  from ..ontology_annotation import (OntologyAnnotation, OntologyAnnotation_reflection)
11
11
 
12
- def _expr584() -> TypeInfo:
12
+ def _expr583() -> TypeInfo:
13
13
  return record_type("ARCtrl.Process.MaterialAttribute", [], MaterialAttribute, lambda: [("ID", option_type(string_type)), ("CharacteristicType", option_type(OntologyAnnotation_reflection()))])
14
14
 
15
15
 
@@ -26,7 +26,7 @@ class MaterialAttribute(Record):
26
26
  return "OA " + MaterialAttribute__get_NameText(this)
27
27
 
28
28
 
29
- MaterialAttribute_reflection = _expr584
29
+ MaterialAttribute_reflection = _expr583
30
30
 
31
31
  def MaterialAttribute_make(id: str | None=None, characteristic_type: OntologyAnnotation | None=None) -> MaterialAttribute:
32
32
  return MaterialAttribute(id, characteristic_type)