arctrl 3.0.0b2__tar.gz → 3.0.0b3__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/PKG-INFO +1 -1
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/pyproject.toml +1 -1
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/__init__.py +2 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/outputs.py +4 -4
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/requirements.py +8 -8
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/tool_description.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/workflow_description.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ContractIO/contract_io.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/component.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/protocol_parameter.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/arc_table.py +51 -51
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/arc_tables.py +39 -39
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/composite_cell.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/composite_column.py +4 -4
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/composite_header.py +4 -4
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/arc_types.py +412 -412
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/conversion.py +98 -98
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/file_system_tree.py +66 -31
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/DataMap/data_context.py +22 -22
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/DataMap/data_map.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/factor.py +19 -19
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/factor_value.py +18 -18
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/process.py +40 -40
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/process_input.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/process_output.py +8 -8
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/protocol_parameter.py +13 -13
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/sample.py +38 -38
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/ldref.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/arc_table.py +85 -85
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/cell_table.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/iotype.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/oatable.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/templates.py +65 -65
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/isa_protocol_context.py +12 -12
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/isa_protocol_parameter_context.py +12 -12
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/rocrate_context.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/converter_options.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/data_file.py +8 -8
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/decode.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/encode.py +16 -16
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/investigation.py +113 -113
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/person.py +52 -52
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/property_value.py +33 -33
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/publication.py +26 -26
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/study.py +131 -131
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/JsonIO/comment.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ROCrate/Generic/dataset.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ROCrate/Generic/organization.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ROCrate/Generic/postal_address.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ROCrate/ISAProfile/sample.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/assays.py +8 -8
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/contacts.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/ontology_annotation.py +8 -8
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/protocols.py +9 -9
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/publication.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/sparse_table.py +32 -32
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/study.py +32 -32
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Spreadsheet/Metadata/workflow.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/WebRequest/web_request_py.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/arc.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/column_index.py +9 -9
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/conversion.py +143 -107
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Cells/fs_cells_collection.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/DSL/dsl.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/DSL/expression.py +6 -6
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/DSL/types.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/DSL/workbook_builder.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Json/worksheet.py +10 -10
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_address.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_base.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Ranges/fs_range_row.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/Tables/fs_table_row.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/fs_column.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/fs_worksheet.py +22 -22
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/fs_spreadsheet/sheet_builder.py +2 -2
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/thoth_json_python/decode.py +4 -4
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/fable_modules/yamlicious/decode.py +20 -20
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/rocrate_io.py +8 -7
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/LICENSE +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/README.md +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/cwltypes.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/decode.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/encode.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/inputs.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/CWL/workflow_steps.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc_assay.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc_investigation.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc_run.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc_study.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/arc_workflow.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/contract.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/datamap.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/git.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Contract/validation_packages_config.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ContractIO/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/ContractIO/file_system_helper.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/collections_.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/date_time.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/hash_codes.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/identifier.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/orcid.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/printer.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/regex.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/sem_ver.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Helper/url.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/column_index.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/factor.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/factor_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/material.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/material_attribute.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/material_attribute_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/material_type.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/process.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/process_input.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/process_output.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/process_parameter_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/process_sequence.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/protocol.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/sample.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Process/source.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/Table/arc_table_aux.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/comment.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/comment_list.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/data.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/data_context.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/data_file.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/data_map.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/identifier_setters.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/iproperty_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/ontology_annotation.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/ontology_source_reference.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/person.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/publication.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/template.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/templates.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/uri.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Core/value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/commit.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/default_gitattributes.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/default_gitignore.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/file_system.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/FileSystem/path.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/DataMap/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/assay_materials.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/component.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/material.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/material_attribute.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/material_attribute_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/material_type.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/process_parameter_value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/protocol.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/source.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/study_materials.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Process/value.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/ldcontext.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/ldgraph.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/ldnode.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/ROCrate/ldvalue.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/composite_cell.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/Table/composite_header.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/assay.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/comment.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/__init__.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/isa_assay_context.py +0 -0
- {arctrl-3.0.0b2 → arctrl-3.0.0b3}/src/ARCtrl/py/Json/context/rocrate/isa_comment_context.py +0 -0
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return ["InlineJavascriptRequirement", "SchemaDefRequirement", "DockerRequirement", "SoftwareRequirement", "InitialWorkDirRequirement", "EnvVarRequirement", "ShellCommandRequirement", "ResourceRequirement", "WorkReuseRequirement", "NetworkAccessRequirement", "InplaceUpdateRequirement", "ToolTimeLimitRequirement", "SubworkflowFeatureRequirement", "ScatterFeatureRequirement", "MultipleInputFeatureRequirement", "StepInputExpressionRequirement"]
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|
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|
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def UpdateCellsBy(self, f: Callable[[int, int, CompositeCell], CompositeCell], skip_validation: bool | None=None) -> None:
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|
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|
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|
def update_cells_by(f: Callable[[int, int, CompositeCell], CompositeCell], skip_validation: bool | None=None) -> Callable[[ArcTable], None]:
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|
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|
def UpdateCellBy(self, column_index: int, row_index: int, f: Callable[[CompositeCell], CompositeCell], skip_validation: bool | None=None) -> None:
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|
|
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|
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|
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|
def update_cell_by(column_index: int, row_index: int, f: Callable[[CompositeCell], CompositeCell], skip_validation: bool | None=None) -> Callable[[ArcTable], None]:
|
|
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|
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|
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|
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|
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|
def UpdateHeader(self, index: int, new_header: CompositeHeader, force_convert_cells: bool | None=None) -> None:
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|
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|
|
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|
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|
|
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|
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|
|
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|
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|
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|
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|
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|
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|
|
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|
|
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|
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return
|
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|
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|
def AddColumn(self, header: CompositeHeader, cells: Array[CompositeCell] | None=None, index: int | None=None, force_replace: bool | None=None) -> None:
|
|
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|
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|
|
@@ -350,12 +350,12 @@ class ArcTable:
|
|
|
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|
|
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|
def add_column(header: CompositeHeader, cells: Array[CompositeCell] | None=None, index: int | None=None, force_replace: bool | None=None) -> Callable[[ArcTable], ArcTable]:
|
|
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|
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|
|
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|
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|
|
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|
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|
|
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|
new_table.AddColumn(header, cells, index, force_replace)
|
|
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|
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|
|
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|
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|
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|
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def AddColumnFill(self, header: CompositeHeader, cell: CompositeCell, index: int | None=None, force_replace: bool | None=None) -> None:
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def add_column_fill(header: CompositeHeader, cell: CompositeCell, index: int | None=None, force_replace: bool | None=None) -> Callable[[ArcTable], ArcTable]:
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new_table.AddColumnFill(header, cell, index, force_replace)
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def UpdateColumn(self, column_index: int, header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> None:
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def update_column(column_index: int, header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> Callable[[ArcTable], ArcTable]:
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new_table.UpdateColumn(column_index, header, cells)
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def InsertColumn(self, index: int, header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> None:
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def insert_column(index: int, header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> Callable[[ArcTable], ArcTable]:
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new_table: ArcTable = table.Copy()
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new_table.InsertColumn(index, header, cells)
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def AppendColumn(self, header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> None:
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def append_column(header: CompositeHeader, cells: Array[CompositeCell] | None=None) -> Callable[[ArcTable], ArcTable]:
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new_table: ArcTable = table.Copy()
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new_table.AppendColumn(header, cells)
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def AddColumns(self, columns: IEnumerable_1[CompositeColumn], index: int | None=None, force_replace: bool | None=None) -> None:
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@staticmethod
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def add_columns(columns: Array[CompositeColumn], index: int | None=None) -> Callable[[ArcTable], ArcTable]:
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new_table: ArcTable = table.Copy()
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new_table.AddColumns(columns, index)
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def RemoveColumn(self, index: int) -> None:
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@staticmethod
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def remove_column(index: int) -> Callable[[ArcTable], ArcTable]:
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def _arrow750(table: ArcTable) -> ArcTable:
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new_table: ArcTable = table.Copy()
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new_table.RemoveColumn(index)
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def RemoveColumns(self, index_arr: Array[int]) -> None:
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this: ArcTable = self
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def _arrow751(index: int) -> None:
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SanityChecks_validateColumnIndex(index, this.ColumnCount, False)
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iterate_2(
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def
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iterate_2(_arrow751, index_arr)
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def _arrow752(index_1: int) -> None:
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this.RemoveColumn(index_1)
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class
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class ObjectExpr753:
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@property
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def Compare(self) -> Callable[[int, int], int]:
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return compare_primitives
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iterate_2(
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iterate_2(_arrow752, sort_descending(index_arr, ObjectExpr753()))
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@staticmethod
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def remove_columns(index_arr: Array[int]) -> Callable[[ArcTable], ArcTable]:
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def
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+
def _arrow754(table: ArcTable) -> ArcTable:
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new_table: ArcTable = table.Copy()
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new_table.RemoveColumns(index_arr)
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return new_table
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return
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+
return _arrow754
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def GetColumn(self, column_index: int, fill_default: bool | None=None) -> CompositeColumn:
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this: ArcTable = self
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@@ -541,10 +541,10 @@ class ArcTable:
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@staticmethod
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def get_column(index: int, fill_default: bool | None=None) -> Callable[[ArcTable], CompositeColumn]:
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-
def
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+
def _arrow755(table: ArcTable) -> CompositeColumn:
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return table.GetColumn(index, fill_default)
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-
return
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+
return _arrow755
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def TryGetColumnByHeader(self, header: CompositeHeader, fill_default: bool | None=None) -> CompositeColumn | None:
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this: ArcTable = self
|
|
@@ -558,10 +558,10 @@ class ArcTable:
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@staticmethod
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|
def try_get_column_by_header(header: CompositeHeader, fill_default: bool | None=None) -> Callable[[ArcTable], CompositeColumn | None]:
|
|
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|
-
def
|
|
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|
+
def _arrow756(table: ArcTable) -> CompositeColumn | None:
|
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|
return table.TryGetColumnByHeader(header, fill_default)
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|
-
return
|
|
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|
+
return _arrow756
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|
def TryGetColumnByHeaderBy(self, header_predicate: Callable[[CompositeHeader], bool], fill_default: bool | None=None) -> CompositeColumn | None:
|
|
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|
this: ArcTable = self
|