apheris-foundry-cli 0.2.0__tar.gz → 0.3.0__tar.gz

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: apheris-foundry-cli
-Version: 0.2.0
+Version: 0.3.0
 Summary: Command-line interface for Apheris Foundry workflows.
 Author: Apheris
 License-Expression: LicenseRef-Apheris-Foundry-Software-License
@@ -39,37 +39,37 @@ Recommended if you already use conda for scientific Python work. A dedicated env
 #### Linux / macOS
 
 ```bash
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
 #### Windows (Anaconda Prompt or PowerShell)
 
 ```powershell
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
-Activate the environment at the start of each session with `conda activate apherisfold`.
+Activate the environment at the start of each session with `conda activate apheris-foundry`.
 
 ### venv (standard Python)
 
 #### Linux / macOS (venv)
 
 ```bash
-python3 -m venv ~/.venvs/apherisfold
-source ~/.venvs/apherisfold/bin/activate
-pip install apherisfold-cli
+python3 -m venv ~/.venvs/apheris-foundry
+source ~/.venvs/apheris-foundry/bin/activate
+pip install apheris-foundry-cli
 ```
 
 #### Windows (PowerShell, venv)
 
 ```powershell
-python -m venv $env:USERPROFILE\.venvs\apherisfold
-& $env:USERPROFILE\.venvs\apherisfold\Scripts\Activate.ps1
-pip install apherisfold-cli
+python -m venv $env:USERPROFILE\.venvs\apheris-foundry
+& $env:USERPROFILE\.venvs\apheris-foundry\Scripts\Activate.ps1
+pip install apheris-foundry-cli
 ```
 
 Activate the environment at the start of each session with the `activate` command above.
@@ -84,7 +84,7 @@ apheris-foundry --help
 ### Upgrade
 
 ```bash
-pip install --upgrade apherisfold-cli
+pip install --upgrade apheris-foundry-cli
 ```
 
 ## Quick start
@@ -99,6 +99,22 @@ apheris-foundry workflows list
 # Submit a run
 apheris-foundry workflows run --workflow predict --input ./request.json
 
+# Inspect the model IDs, weights, and default parameters advertised by Hub
+apheris-foundry workflows models --workflow predict
+
+# Override prediction parameters with a Hub-schema-validated JSON object
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params '{"seeds":[7,9],"num_diffusion_samples":3}'
+
+# Or provide the same JSON object from a file
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params @./model-params.json
+
+# Select a non-default model/weight advertised by the workflow
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --param model=<model-id> --weight <weight-version> \
+  --model-params @./model-params.json
+
 # List submitted runs
 apheris-foundry jobs list
 
@@ -132,9 +148,10 @@ apheris-foundry jobs error --id <job-id>
 | Command | Description |
 | ------- | ----------- |
 | `apheris-foundry workflows list` | List workflow definitions exposed by Hub |
-| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition |
+| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition and advertised model defaults |
+| `apheris-foundry workflows models --workflow <id>` | List models, weights, and default prediction parameters advertised by Hub (`--json` includes full metadata) |
 | `apheris-foundry workflows graph --workflow <id>` | Show the workflow DAG |
-| `apheris-foundry workflows run --workflow <id>` | Submit a workflow run |
+| `apheris-foundry workflows run --workflow <id> [--model-params <JSON\|@file>]` | Submit a workflow run with Hub-schema-validated model parameters |
 
 ### Run instances (`runs`)
 
@@ -153,6 +170,8 @@ apheris-foundry workflows run --help
 apheris-foundry jobs get --help
 ```
 
+`--model-params` accepts one JSON object. Use an inline object for short overrides, or prefix a JSON filename with `@` to load the object from that file. Before submitting the run, the CLI retrieves the selected model version, weight, and capability schema from Hub and validates the object. Use `workflows models` to discover available model IDs and weights.
+
 ## License
 
 This package is licensed under the [Apheris Foundry Software License](https://www.apheris.com/docs/hub/hub-license.html). The full license text is also included in every published wheel as `LICENSE`.

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/README.md

@@ -16,37 +16,37 @@ Recommended if you already use conda for scientific Python work. A dedicated env
 #### Linux / macOS
 
 ```bash
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
 #### Windows (Anaconda Prompt or PowerShell)
 
 ```powershell
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
-Activate the environment at the start of each session with `conda activate apherisfold`.
+Activate the environment at the start of each session with `conda activate apheris-foundry`.
 
 ### venv (standard Python)
 
 #### Linux / macOS (venv)
 
 ```bash
-python3 -m venv ~/.venvs/apherisfold
-source ~/.venvs/apherisfold/bin/activate
-pip install apherisfold-cli
+python3 -m venv ~/.venvs/apheris-foundry
+source ~/.venvs/apheris-foundry/bin/activate
+pip install apheris-foundry-cli
 ```
 
 #### Windows (PowerShell, venv)
 
 ```powershell
-python -m venv $env:USERPROFILE\.venvs\apherisfold
-& $env:USERPROFILE\.venvs\apherisfold\Scripts\Activate.ps1
-pip install apherisfold-cli
+python -m venv $env:USERPROFILE\.venvs\apheris-foundry
+& $env:USERPROFILE\.venvs\apheris-foundry\Scripts\Activate.ps1
+pip install apheris-foundry-cli
 ```
 
 Activate the environment at the start of each session with the `activate` command above.
@@ -61,7 +61,7 @@ apheris-foundry --help
 ### Upgrade
 
 ```bash
-pip install --upgrade apherisfold-cli
+pip install --upgrade apheris-foundry-cli
 ```
 
 ## Quick start
@@ -76,6 +76,22 @@ apheris-foundry workflows list
 # Submit a run
 apheris-foundry workflows run --workflow predict --input ./request.json
 
+# Inspect the model IDs, weights, and default parameters advertised by Hub
+apheris-foundry workflows models --workflow predict
+
+# Override prediction parameters with a Hub-schema-validated JSON object
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params '{"seeds":[7,9],"num_diffusion_samples":3}'
+
+# Or provide the same JSON object from a file
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params @./model-params.json
+
+# Select a non-default model/weight advertised by the workflow
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --param model=<model-id> --weight <weight-version> \
+  --model-params @./model-params.json
+
 # List submitted runs
 apheris-foundry jobs list
 
@@ -109,9 +125,10 @@ apheris-foundry jobs error --id <job-id>
 | Command | Description |
 | ------- | ----------- |
 | `apheris-foundry workflows list` | List workflow definitions exposed by Hub |
-| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition |
+| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition and advertised model defaults |
+| `apheris-foundry workflows models --workflow <id>` | List models, weights, and default prediction parameters advertised by Hub (`--json` includes full metadata) |
 | `apheris-foundry workflows graph --workflow <id>` | Show the workflow DAG |
-| `apheris-foundry workflows run --workflow <id>` | Submit a workflow run |
+| `apheris-foundry workflows run --workflow <id> [--model-params <JSON\|@file>]` | Submit a workflow run with Hub-schema-validated model parameters |
 
 ### Run instances (`runs`)
 
@@ -130,6 +147,8 @@ apheris-foundry workflows run --help
 apheris-foundry jobs get --help
 ```
 
+`--model-params` accepts one JSON object. Use an inline object for short overrides, or prefix a JSON filename with `@` to load the object from that file. Before submitting the run, the CLI retrieves the selected model version, weight, and capability schema from Hub and validates the object. Use `workflows models` to discover available model IDs and weights.
+
 ## License
 
 This package is licensed under the [Apheris Foundry Software License](https://www.apheris.com/docs/hub/hub-license.html). The full license text is also included in every published wheel as `LICENSE`.

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "apheris-foundry-cli"
-version = "0.2.0"
+version = "0.3.0"
 description = "Command-line interface for Apheris Foundry workflows."
 readme = "README.md"
 requires-python = ">=3.10"

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apheris_foundry_cli.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: apheris-foundry-cli
-Version: 0.2.0
+Version: 0.3.0
 Summary: Command-line interface for Apheris Foundry workflows.
 Author: Apheris
 License-Expression: LicenseRef-Apheris-Foundry-Software-License
@@ -39,37 +39,37 @@ Recommended if you already use conda for scientific Python work. A dedicated env
 #### Linux / macOS
 
 ```bash
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
 #### Windows (Anaconda Prompt or PowerShell)
 
 ```powershell
-conda create -n apherisfold python=3.11 -y
-conda activate apherisfold
-pip install apherisfold-cli
+conda create -n apheris-foundry python=3.11 -y
+conda activate apheris-foundry
+pip install apheris-foundry-cli
 ```
 
-Activate the environment at the start of each session with `conda activate apherisfold`.
+Activate the environment at the start of each session with `conda activate apheris-foundry`.
 
 ### venv (standard Python)
 
 #### Linux / macOS (venv)
 
 ```bash
-python3 -m venv ~/.venvs/apherisfold
-source ~/.venvs/apherisfold/bin/activate
-pip install apherisfold-cli
+python3 -m venv ~/.venvs/apheris-foundry
+source ~/.venvs/apheris-foundry/bin/activate
+pip install apheris-foundry-cli
 ```
 
 #### Windows (PowerShell, venv)
 
 ```powershell
-python -m venv $env:USERPROFILE\.venvs\apherisfold
-& $env:USERPROFILE\.venvs\apherisfold\Scripts\Activate.ps1
-pip install apherisfold-cli
+python -m venv $env:USERPROFILE\.venvs\apheris-foundry
+& $env:USERPROFILE\.venvs\apheris-foundry\Scripts\Activate.ps1
+pip install apheris-foundry-cli
 ```
 
 Activate the environment at the start of each session with the `activate` command above.
@@ -84,7 +84,7 @@ apheris-foundry --help
 ### Upgrade
 
 ```bash
-pip install --upgrade apherisfold-cli
+pip install --upgrade apheris-foundry-cli
 ```
 
 ## Quick start
@@ -99,6 +99,22 @@ apheris-foundry workflows list
 # Submit a run
 apheris-foundry workflows run --workflow predict --input ./request.json
 
+# Inspect the model IDs, weights, and default parameters advertised by Hub
+apheris-foundry workflows models --workflow predict
+
+# Override prediction parameters with a Hub-schema-validated JSON object
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params '{"seeds":[7,9],"num_diffusion_samples":3}'
+
+# Or provide the same JSON object from a file
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --model-params @./model-params.json
+
+# Select a non-default model/weight advertised by the workflow
+apheris-foundry workflows run --workflow predict --input ./request.json \
+  --param model=<model-id> --weight <weight-version> \
+  --model-params @./model-params.json
+
 # List submitted runs
 apheris-foundry jobs list
 
@@ -132,9 +148,10 @@ apheris-foundry jobs error --id <job-id>
 | Command | Description |
 | ------- | ----------- |
 | `apheris-foundry workflows list` | List workflow definitions exposed by Hub |
-| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition |
+| `apheris-foundry workflows get --workflow <id>` | Inspect one workflow definition and advertised model defaults |
+| `apheris-foundry workflows models --workflow <id>` | List models, weights, and default prediction parameters advertised by Hub (`--json` includes full metadata) |
 | `apheris-foundry workflows graph --workflow <id>` | Show the workflow DAG |
-| `apheris-foundry workflows run --workflow <id>` | Submit a workflow run |
+| `apheris-foundry workflows run --workflow <id> [--model-params <JSON\|@file>]` | Submit a workflow run with Hub-schema-validated model parameters |
 
 ### Run instances (`runs`)
 
@@ -153,6 +170,8 @@ apheris-foundry workflows run --help
 apheris-foundry jobs get --help
 ```
 
+`--model-params` accepts one JSON object. Use an inline object for short overrides, or prefix a JSON filename with `@` to load the object from that file. Before submitting the run, the CLI retrieves the selected model version, weight, and capability schema from Hub and validates the object. Use `workflows models` to discover available model IDs and weights.
+
 ## License
 
 This package is licensed under the [Apheris Foundry Software License](https://www.apheris.com/docs/hub/hub-license.html). The full license text is also included in every published wheel as `LICENSE`.

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apherisfold_cli/commands/foundry.py

@@ -783,10 +783,14 @@ def foundry_models(workflow: str, *, json_output: bool) -> None:
     table.add_column("VERSION", overflow="fold")
     table.add_column("WEIGHT", no_wrap=True)
     table.add_column("CAPABILITIES", overflow="fold")
+    table.add_column("DEFAULT PARAMETERS", overflow="fold")
     table.add_column("DESCRIPTION", overflow="fold")
     for model in models:
         if not isinstance(model, dict):
             continue
+        wrapper = model.get("wrapper") if isinstance(model.get("wrapper"), dict) else {}
+        defaults = wrapper.get("predictParamsDefaults") if isinstance(wrapper, dict) else {}
+        defaults_text = json.dumps(defaults, sort_keys=True) if isinstance(defaults, dict) and defaults else ""
         weights = model.get("weights") if isinstance(model.get("weights"), list) else []
         if not weights:
             table.add_row(
@@ -794,6 +798,7 @@ def foundry_models(workflow: str, *, json_output: bool) -> None:
                 str(model.get("version", "")),
                 "",
                 ", ".join(str(item) for item in model.get("capabilities", []) if item),
+                defaults_text,
                 "",
             )
             continue
@@ -810,14 +815,20 @@ def foundry_models(workflow: str, *, json_output: bool) -> None:
                 str(model.get("version", "")),
                 f"{weight.get('version', '')}{marker}",
                 ", ".join(str(item) for item in capabilities if item),
+                defaults_text,
                 str(weight.get("description", "")),
             )
 
     examples = Table(box=box.SIMPLE_HEAD, show_header=False, padding=(0, 1), expand=False)
     examples.add_column("COMMAND", style="cyan", overflow="fold")
+    examples.add_row(f"apheris-foundry workflows run --workflow {workflow} --input request.json")
     examples.add_row(
-        f"apheris-foundry workflows run --workflow {workflow} --param model=mock --param weight=0.0.0 --input request.json"
+        f"apheris-foundry workflows run --workflow {workflow} --weight <weight-version> --input request.json"
     )
+    examples.add_row(
+        f'apheris-foundry workflows run --workflow {workflow} --model-params \'{{"seeds":[42],"num_diffusion_samples":1}}\''
+    )
+    examples.add_row(f"apheris-foundry workflows run --workflow {workflow} --model-params @model-params.json")
     examples.add_row(f"apheris-foundry workflows get --workflow {workflow}")
     run_simple_listing(
         task_name="foundry.models",

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apherisfold_cli/commands/login.py

@@ -43,15 +43,15 @@ def _is_verbose() -> bool:
 def _build_examples_table() -> Table:
     table = Table(box=box.SIMPLE_HEAD, show_header=False, padding=(0, 1))
     table.add_column("command")
-    table.add_row(Text("apherisfold login --url https://hub.example.com", style="cyan"))
-    table.add_row(Text("apherisfold login --url https://hub.example.com --callback-host localhost", style="cyan"))
+    table.add_row(Text("apheris-foundry login --url https://hub.example.com", style="cyan"))
+    table.add_row(Text("apheris-foundry login --url https://hub.example.com --callback-host localhost", style="cyan"))
     table.add_row(
         Text(
-            "apherisfold login --url https://hub.example.com --issuer https://dex.example.com --client-id apheris-hub",
+            "apheris-foundry login --url https://hub.example.com --issuer https://dex.example.com --client-id apheris-hub",
             style="cyan",
         )
     )
-    table.add_row(Text("apherisfold login status", style="cyan"))
+    table.add_row(Text("apheris-foundry login status", style="cyan"))
     return table
 
 
@@ -70,7 +70,7 @@ def _render_login_overview() -> None:
 
     console.print(
         Group(
-            Text("Usage: apherisfold login --url HUB_URL [--callback-host HOST]", style="bold"),
+            Text("Usage: apheris-foundry login --url HUB_URL [--callback-host HOST]", style="bold"),
             Text(""),
             Panel(options_table, title="Login Options", border_style="dim"),
             Panel(_build_examples_table(), title="Examples", border_style="dim"),

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apherisfold_cli/core/auth.py

@@ -242,10 +242,10 @@ def token_exchange_url(config: RuntimeAuthConfig) -> str:
 
 
 def config_directory() -> Path:
-    override = os.getenv("APHERISFOLD_CONFIG_DIR")
+    override = os.getenv("APHERIS_FOUNDRY_CONFIG_DIR") or os.getenv("APHERISFOLD_CONFIG_DIR")
     if override:
         return Path(override)
-    return Path.home() / ".config" / "apherisfold"
+    return Path.home() / ".config" / "apheris-foundry"
 
 
 def config_path() -> Path:
@@ -756,23 +756,23 @@ def _login_status_error(
     if session is not None and not bool(expired):
         return None, None
     if config is None:
-        return "No Hub runtime configuration found.", "Run 'apherisfold login' to configure a Hub."
+        return "No Hub runtime configuration found.", "Run 'apheris-foundry login' to configure a Hub."
     if not config.auth_enabled:
         return None, None
     if active_session is None:
-        return "No saved login session found.", "Run 'apherisfold login' to create a session."
+        return "No saved login session found.", "Run 'apheris-foundry login' to create a session."
     if not _session_matches_config(config, active_session):
         return (
             "Saved login session belongs to a different Hub or client.",
-            f"Configured Hub is {config.hub_url}; saved session Hub is {active_session.hub_url}. Run 'apherisfold login' for the configured Hub.",
+            f"Configured Hub is {config.hub_url}; saved session Hub is {active_session.hub_url}. Run 'apheris-foundry login' for the configured Hub.",
         )
     if refresh_error:
         return "Token refresh failed.", refresh_error
     if expired and not active_session.refresh_token:
-        return "Saved login session is expired and has no refresh token.", "Run 'apherisfold login' again."
+        return "Saved login session is expired and has no refresh token.", "Run 'apheris-foundry login' again."
     if expired:
-        return "Saved login session is expired.", "Run 'apherisfold login' again."
-    return "No usable authenticated session found.", "Run 'apherisfold login' again."
+        return "Saved login session is expired.", "Run 'apheris-foundry login' again."
+    return "No usable authenticated session found.", "Run 'apheris-foundry login' again."
 
 
 def format_expires_at(expires_at: int | None) -> str | None:
@@ -925,10 +925,12 @@ def _browser_open(url: str) -> bool:
 
 
 def _browser_auto_open_enabled() -> bool:
-    open_raw = os.getenv("APHERISFOLD_OPEN_BROWSER", "").strip().lower()
+    open_raw = (os.getenv("APHERIS_FOUNDRY_OPEN_BROWSER") or os.getenv("APHERISFOLD_OPEN_BROWSER", "")).strip().lower()
     if open_raw in {"1", "true", "yes", "on"}:
         return True
-    no_browser_raw = os.getenv("APHERISFOLD_NO_BROWSER", "").strip().lower()
+    no_browser_raw = (
+        (os.getenv("APHERIS_FOUNDRY_NO_BROWSER") or os.getenv("APHERISFOLD_NO_BROWSER", "")).strip().lower()
+    )
     if no_browser_raw in {"1", "true", "yes", "on"}:
         return False
     return False
@@ -977,7 +979,7 @@ class _CallbackServer:
 <head>
   <meta charset="utf-8">
   <meta name="viewport" content="width=device-width, initial-scale=1">
-  <title>ApherisFold Hub Login</title>
+  <title>Apheris Foundry Hub Login</title>
   <style>
     :root {
       color-scheme: light;
@@ -1042,7 +1044,7 @@ class _CallbackServer:
 </head>
 <body>
   <main class="shell">
-    <div class="brand" aria-label="ApherisFold Hub">
+    <div class="brand" aria-label="Apheris Foundry Hub">
       <svg width="263" height="43" viewBox="0 0 263 43" fill="none" xmlns="http://www.w3.org/2000/svg" aria-hidden="true">
         <path opacity="0.5" d="M172.148 20.701H184.391V23.671H172.148V34H168.518V10.438H184.919V13.474H172.148V20.701ZM198.859 9.91C201.081 9.91 203.028 10.416 204.7 11.428C206.394 12.418 207.703 13.848 208.627 15.718C209.551 17.566 210.013 19.733 210.013 22.219C210.013 24.705 209.551 26.883 208.627 28.753C207.703 30.601 206.394 32.031 204.7 33.043C203.028 34.033 201.081 34.528 198.859 34.528C196.637 34.528 194.679 34.033 192.985 33.043C191.313 32.031 190.015 30.601 189.091 28.753C188.167 26.883 187.705 24.705 187.705 22.219C187.705 19.733 188.167 17.566 189.091 15.718C190.015 13.848 191.313 12.418 192.985 11.428C194.679 10.416 196.637 9.91 198.859 9.91ZM198.859 31.492C201.147 31.492 202.962 30.678 204.304 29.05C205.646 27.4 206.317 25.123 206.317 22.219C206.317 19.315 205.646 17.049 204.304 15.421C202.962 13.771 201.147 12.946 198.859 12.946C196.571 12.946 194.756 13.771 193.414 15.421C192.072 17.049 191.401 19.315 191.401 22.219C191.401 25.123 192.072 27.4 193.414 29.05C194.756 30.678 196.571 31.492 198.859 31.492ZM213.585 10.438H217.215V30.865H230.085V34H213.585V10.438ZM242.113 10.438C244.379 10.438 246.348 10.889 248.02 11.791C249.714 12.671 251.023 13.991 251.947 15.751C252.871 17.511 253.333 19.667 253.333 22.219C253.333 24.771 252.871 26.927 251.947 28.687C251.023 30.447 249.714 31.778 248.02 32.68C246.348 33.56 244.379 34 242.113 34H233.17V10.438H242.113ZM241.651 30.964C244.203 30.964 246.172 30.216 247.558 28.72C248.944 27.224 249.637 25.057 249.637 22.219C249.637 19.381 248.944 17.214 247.558 15.718C246.172 14.222 244.203 13.474 241.651 13.474H236.8V30.964H241.651Z" fill="#21484D"/>
         <path d="M16.4623 27.0782H6.04042L3.6931 33.5385H0L8.96258 10.4609H13.6538L22.5785 33.5385H18.8097L16.4623 27.0782ZM7.00071 24.3866H15.4608L14.4213 21.5402C13.4611 18.9623 12.4595 16.0023 11.7298 13.5793H10.7696C10.002 16.0402 9.00043 18.9657 8.04015 21.5402L7.00071 24.3866Z" fill="#21484D"/>
@@ -1059,7 +1061,7 @@ class _CallbackServer:
       <div class="brand-subtitle">Hub</div>
     </div>
     <div class="status">Sign-in completed</div>
-    <p>Return to your terminal to continue using the ApherisFold CLI.</p>
+    <p>Return to your terminal to continue using the Apheris Foundry CLI.</p>
   </main>
 </body>
 </html>"""

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apherisfold_cli/core/hub_requests.py

@@ -28,7 +28,7 @@ def _request_headers(
         raise CLIError(
             code=EXIT_PRECONDITION,
             category="precondition",
-            message="No Hub runtime configuration found. Run 'apherisfold login' first.",
+            message="No Hub runtime configuration found. Run 'apheris-foundry login' first.",
             task="hub",
         )
 
@@ -42,7 +42,7 @@ def _request_headers(
             raise CLIError(
                 code=EXIT_PRECONDITION,
                 category="precondition",
-                message="No authenticated Hub session found. Run 'apherisfold login' first.",
+                message="No authenticated Hub session found. Run 'apheris-foundry login' first.",
                 task="hub",
             )
         headers["Authorization"] = f"Bearer {session.access_token}"
@@ -110,7 +110,7 @@ def _hub_url(path: str) -> str:
         raise CLIError(
             code=EXIT_PRECONDITION,
             category="precondition",
-            message="No Hub runtime configuration found. Run 'apherisfold login' first.",
+            message="No Hub runtime configuration found. Run 'apheris-foundry login' first.",
             task="hub",
         )
     return f"{config.hub_url.rstrip('/')}{path}"
@@ -208,6 +208,18 @@ def get_foundry_workflow(workflow_id: str) -> dict[str, Any]:
     return _request_json(path=f"/api/v1/foundry/workflows/{encoded}", method="GET", task="foundry.workflows.get")
 
 
+def get_model_schema(*, model_version_id: str, weight_version: str, capability: str) -> dict[str, Any]:
+    """Return the Hub OpenAPI schema for one model weight and capability."""
+    version_key = urllib.parse.quote(model_version_id, safe="")
+    weight_key = urllib.parse.quote(weight_version, safe="")
+    capability_key = urllib.parse.quote(capability, safe="")
+    return _request_json(
+        path=f"/api/v1/schemas/{version_key}/{weight_key}?capability={capability_key}",
+        method="GET",
+        task="foundry.model-schema",
+    )
+
+
 def list_foundry_runs() -> dict[str, Any]:
     return _request_json(path="/api/v1/foundry/runs", method="GET", task="foundry.runs.list")
 

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/src/apherisfold_cli/main.py

@@ -1,9 +1,11 @@
 from __future__ import annotations
 
+import json
 from pathlib import Path
-from typing import Annotated
+from typing import Annotated, Any
 
 import typer
+from jsonschema import ValidationError, validate
 from rich import box
 from rich.console import Console, Group
 from rich.panel import Panel
@@ -18,6 +20,7 @@ from apherisfold_cli.commands.foundry import (
     foundry_get,
     foundry_list,
     foundry_logs,
+    foundry_models,
     foundry_run,
     foundry_workflow_graph,
 )
@@ -245,18 +248,36 @@ def workflows_get_cmd(
     info.add_row("Output", str(payload.get("output") or ""))
     info.add_row("Profiles", ", ".join(str(item) for item in payload.get("profiles", []) if item))
 
+    models_value = payload.get("models")
+    models = models_value if isinstance(models_value, list) else []
+    for model in models:
+        if not isinstance(model, dict):
+            continue
+        defaults = _predict_params_defaults(model)
+        if defaults:
+            info.add_row(f"{model.get('id', 'model')} defaults", json.dumps(defaults, sort_keys=True))
+
     examples = Table(box=box.SIMPLE_HEAD, show_header=False, padding=(0, 1), expand=False)
     examples.add_column("COMMAND", style="cyan", overflow="fold")
     examples.add_row(f"apheris-foundry workflows run --workflow {workflow_id} --input input.csv")
+    if models:
+        examples.add_row(f"apheris-foundry workflows run --workflow {workflow_id} --model-params '{{\"seeds\":[42]}}'")
+        examples.add_row(f"apheris-foundry workflows run --workflow {workflow_id} --model-params @model-params.json")
     examples.add_row(f"apheris-foundry workflows graph --workflow {workflow_id}")
 
+    parameter_help = "Workflow-specific values can be passed with repeated --param key=value options."
+    if models:
+        parameter_help = (
+            "Use --param key=value for workflow values and --model-params JSON (or @file.json) for model values."
+        )
+
     run_simple_listing(
         task_name="foundry.workflows.get",
         payload=payload,
         renderable_output=Group(
             Panel(info, title="Foundry Workflow", border_style="cyan"),
             Panel(
-                Text("Workflow-specific values can be passed with repeated --param key=value options."),
+                Text(parameter_help),
                 title="Parameters",
                 border_style="dim",
                 expand=False,
@@ -266,6 +287,14 @@ def workflows_get_cmd(
     )
 
 
+@workflows_app.command("models", help="List models and prediction parameters for a Foundry workflow.")
+def workflows_models_cmd(
+    workflow_id: Annotated[str, typer.Option("--workflow", help="Workflow ID.")],
+    json_output: Annotated[bool, typer.Option("--json", help="Render as JSON.")] = False,
+) -> None:
+    foundry_models(workflow_id, json_output=json_output)
+
+
 @workflows_app.command("graph", help="Show a Foundry workflow graph served by Hub.")
 def workflows_graph_cmd(
     workflow_id: Annotated[str, typer.Option("--workflow", help="Workflow ID.")],
@@ -297,6 +326,17 @@ def workflows_run_cmd(
         list[str] | None,
         typer.Option("--param", help="Nextflow parameter as key=value. Repeat for multiple parameters."),
     ] = None,
+    weight: Annotated[
+        str | None,
+        typer.Option("--weight", help="Selected model weight version."),
+    ] = None,
+    model_params_raw: Annotated[
+        str | None,
+        typer.Option(
+            "--model-params",
+            help="Model parameters as an inline JSON object or @path/to/model-params.json.",
+        ),
+    ] = None,
     tag: Annotated[
         list[str] | None,
         typer.Option("--tag", help="Tag to attach to the run. Repeat for multiple tags."),
@@ -305,7 +345,22 @@ def workflows_run_cmd(
     wait: Annotated[bool, typer.Option("--wait", help="Block until the run reaches a terminal status.")] = False,
     json_output: Annotated[bool, typer.Option("--json", help="Render the run response as JSON.")] = False,
 ) -> None:
-    params = _foundry_params_from_options(param)
+    try:
+        params = _foundry_params_from_options(param)
+        if weight:
+            params = {**(params or {}), "weight": weight}
+        model_params = _load_model_params(model_params_raw)
+        if model_params is not None:
+            params = _validate_foundry_model_params(workflow_id, params, model_params)
+            params = {**(params or {}), "modelParams": json.dumps(model_params, separators=(",", ":"))}
+        elif weight:
+            # A weight identifies a model version only in the context of a
+            # model. For a one-model workflow we can make that selection
+            # explicit without burdening the user with --param model=... .
+            _, params = _resolve_foundry_model_selection(workflow_id, params)
+    except typer.BadParameter as error:
+        typer.echo(str(error), err=True)
+        raise typer.Exit(code=2) from error
     inputs = _foundry_input_files(workflow_id, input_path)
     foundry_run(
         workflow_id,
@@ -327,10 +382,116 @@ def _foundry_params_from_options(param: list[str] | None) -> dict[str, str] | No
         if "=" not in kv:
             raise typer.BadParameter(f"--param must be key=value, got: {kv!r}")
         key, value = kv.split("=", 1)
+        if key == "modelParams":
+            raise typer.BadParameter("use --model-params JSON (or @file.json) for model parameters")
+        if key == "weight":
+            raise typer.BadParameter("use --weight for the selected model weight version")
         params[key] = value
     return params
 
 
+def _load_model_params(raw_value: str | None) -> dict[str, Any] | None:
+    if raw_value is None:
+        return None
+
+    source = raw_value
+    if raw_value.startswith("@"):
+        path = Path(raw_value[1:])
+        if not raw_value[1:] or not path.is_file():
+            raise typer.BadParameter(f"--model-params file does not exist or is not a file: {path}")
+        try:
+            source = path.read_text(encoding="utf-8")
+        except OSError as error:
+            raise typer.BadParameter(f"could not read --model-params file: {path}") from error
+    try:
+        value = json.loads(source)
+    except json.JSONDecodeError as error:
+        raise typer.BadParameter("--model-params must be a valid JSON object or @path/to/file.json") from error
+    if not isinstance(value, dict):
+        raise typer.BadParameter("--model-params must be a JSON object")
+    return value
+
+
+def _predict_params_defaults(model: dict[str, Any]) -> dict[str, Any]:
+    wrapper = model.get("wrapper")
+    if not isinstance(wrapper, dict):
+        return {}
+    defaults = wrapper.get("predictParamsDefaults")
+    return defaults if isinstance(defaults, dict) else {}
+
+
+def _validate_foundry_model_params(
+    workflow_id: str,
+    params: dict[str, str] | None,
+    model_params: dict[str, Any],
+) -> dict[str, str]:
+    selected_model, resolved_params = _resolve_foundry_model_selection(workflow_id, params)
+    schema = _foundry_model_params_schema(selected_model)
+    try:
+        validate(instance=model_params, schema=schema)
+    except ValidationError as error:
+        raise typer.BadParameter(f"invalid --model-params: {error.message}") from error
+    return resolved_params
+
+
+def _resolve_foundry_model_selection(
+    workflow_id: str, params: dict[str, str] | None
+) -> tuple[dict[str, Any], dict[str, str]]:
+    payload = get_foundry_workflow(workflow_id)
+    models_value = payload.get("models")
+    models = models_value if isinstance(models_value, list) else []
+    resolved_params = dict(params or {})
+    selected_model_id = resolved_params.get("model")
+    selected_model = next(
+        (model for model in models if isinstance(model, dict) and model.get("id") == selected_model_id),
+        None,
+    )
+    if selected_model is None and len(models) == 1 and isinstance(models[0], dict):
+        selected_model = models[0]
+        model_id = selected_model.get("id")
+        if isinstance(model_id, str) and model_id:
+            resolved_params["model"] = model_id
+    if selected_model is None:
+        raise typer.BadParameter("this option requires a workflow with one selected model; pass --param model=<id>")
+
+    weights = selected_model.get("weights") if isinstance(selected_model.get("weights"), list) else []
+    requested_weight = resolved_params.get("weight")
+    selected_weight = (
+        next(
+            (item for item in weights if isinstance(item, dict) and item.get("version") == requested_weight),
+            None,
+        )
+        if requested_weight
+        else next((item for item in weights if isinstance(item, dict) and item.get("default")), None)
+    )
+    if selected_weight is None and not requested_weight:
+        selected_weight = next((item for item in weights if isinstance(item, dict)), None)
+    if not isinstance(selected_weight, dict) or not isinstance(selected_weight.get("version"), str):
+        raise typer.BadParameter("the selected model does not advertise the requested weight")
+    if not requested_weight:
+        resolved_params["weight"] = selected_weight["version"]
+    return selected_model, resolved_params
+
+
+def _foundry_model_params_schema(model: dict[str, Any]) -> dict[str, Any]:
+    defaults = _predict_params_defaults(model)
+    schemas = model.get("schemas")
+    tasks = schemas.get("tasks") if isinstance(schemas, dict) else None
+    task = (
+        next((item for item in tasks if isinstance(item, dict) and item.get("name") == "predict-openfold3"), None)
+        if isinstance(tasks, list)
+        else None
+    )
+    parameters = task.get("parameters") if isinstance(task, dict) else None
+    properties = parameters.get("properties") if isinstance(parameters, dict) else None
+    if not defaults or not isinstance(properties, dict):
+        raise typer.BadParameter("Hub did not provide model parameter schema for the selected model")
+    model_properties = {name: properties[name] for name in defaults if isinstance(properties.get(name), dict)}
+    if set(model_properties) != set(defaults):
+        raise typer.BadParameter("Hub model parameter defaults do not match its advertised schema")
+    return {"type": "object", "additionalProperties": False, "properties": model_properties}
+
+
 def _generic_input_files(input_paths: list[Path] | None) -> dict[str, str] | None:
     if not input_paths:
         return None
@@ -345,20 +506,10 @@ def _generic_input_files(input_paths: list[Path] | None) -> dict[str, str] | Non
 
 
 def _foundry_input_files(workflow: str, input_paths: list[Path] | None) -> dict[str, str] | None:
-    inputs = _generic_input_files(input_paths)
-    if workflow != "predict" or not inputs:
-        return inputs
-
-    json_names = [name for name in inputs if name.lower().endswith(".json")]
-    if not json_names:
-        return inputs
-
-    request_name = "queries.json" if "queries.json" in inputs else json_names[0]
-    request_content = inputs[request_name]
-    if request_name != "queries.json":
-        del inputs[request_name]
-    inputs["queries.json"] = request_content
-    return inputs
+    del workflow
+    # The Foundry MSA task accepts one request JSON by content, not filename.
+    # Preserve the user-provided name so staging never creates a second JSON.
+    return _generic_input_files(input_paths)
 
 
 def main() -> int:

apheris_foundry_cli-0.3.0/src/apherisfold_cli/version.py

@@ -0,0 +1 @@
+__version__ = "0.3.0"

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/tests/test_auth.py

@@ -15,6 +15,7 @@ from apherisfold_cli.core.auth import (
     build_authorization_parameters,
     build_token_exchange_form,
     clear_session,
+    config_directory,
     fetch_discovery_document,
     fetch_runtime_auth_config,
     format_expires_at,
@@ -39,6 +40,13 @@ def isolate_auth_config_dir(tmp_path: Path, monkeypatch) -> None:
     monkeypatch.setenv("APHERISFOLD_CONFIG_DIR", str(tmp_path / "auth-config"))
 
 
+def test_config_directory_prefers_foundry_environment_variable(tmp_path: Path, monkeypatch) -> None:
+    expected = tmp_path / "foundry-config"
+    monkeypatch.setenv("APHERIS_FOUNDRY_CONFIG_DIR", str(expected))
+
+    assert config_directory() == expected
+
+
 def test_fetch_runtime_auth_config_parses_forgerock_payload(monkeypatch) -> None:
     payload = {
         "AUTH0_ENABLED": True,

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/tests/test_cli.py

@@ -244,6 +244,14 @@ def hub_api_fixture(monkeypatch):
                         ],
                     },
                 },
+                {
+                    "id": "predict",
+                    "description": "Predict structures",
+                    "title": "Predict",
+                    "input": "Request JSON",
+                    "output": "Structure predictions",
+                    "profiles": ["local", "k8s"],
+                },
                 {
                     "id": "fragment-analysis",
                     "description": "Fragment analysis",
@@ -275,20 +283,55 @@ def hub_api_fixture(monkeypatch):
         for workflow in workflows:
             if workflow["id"] != workflow_id:
                 continue
-            if workflow_id == "legacy_predict":
+            if workflow_id in {"legacy_predict", "predict"}:
                 return {
                     **workflow,
                     "models": [
                         {
-                            "id": "mock",
-                            "version": "mock:0.0.0",
+                            "id": "openfold3",
+                            "version": "openfold3:0.0.0",
+                            "wrapper": {
+                                "predictParamsDefaults": {
+                                    "num_diffusion_samples": 1,
+                                    "seeds": [42],
+                                }
+                            },
+                            "schemas": {
+                                "tasks": [
+                                    {
+                                        "name": "predict-openfold3",
+                                        "parameters": {
+                                            "type": "object",
+                                            "additionalProperties": False,
+                                            "required": ["weights"],
+                                            "properties": {
+                                                "weights": {"type": "string"},
+                                                "num_diffusion_samples": {
+                                                    "type": "integer",
+                                                    "minimum": 1,
+                                                },
+                                                "seeds": {
+                                                    "type": "array",
+                                                    "items": {"type": "integer", "minimum": 0},
+                                                    "minItems": 1,
+                                                },
+                                            },
+                                        },
+                                    }
+                                ]
+                            },
                             "weights": [
                                 {
                                     "version": "0.0.0",
                                     "description": "Mock model weights",
                                     "capabilities": ["inference"],
                                     "default": True,
-                                }
+                                },
+                                {
+                                    "version": "0.3.0",
+                                    "description": "Alternative model weights",
+                                    "capabilities": ["inference"],
+                                },
                             ],
                         }
                     ],
@@ -359,9 +402,27 @@ def test_foundry_workflows_get_shows_workflow_contract(hub_api_fixture) -> None:
     assert "Molecule CSV" in result.stdout
     assert "Fragment frequency" in result.stdout
     assert "--param key=value" in result.stdout
+    assert "--model-params" not in result.stdout
     assert hub_api_fixture["get_foundry_workflow"] == ["fragment-analysis"]
 
 
+def test_foundry_workflows_get_shows_prediction_defaults(hub_api_fixture) -> None:
+    result = runner.invoke(app, ["workflows", "get", "--workflow", "predict"])
+
+    assert result.exit_code == 0
+    assert '"num_diffusion_samples": 1' in result.stdout
+    assert "--model-params" in result.stdout
+    assert "@model-params.json" in result.stdout
+    assert '"seeds": [42]' in result.stdout
+
+
+def test_foundry_workflows_models_shows_prediction_defaults(hub_api_fixture) -> None:
+    result = runner.invoke(app, ["workflows", "models", "--workflow", "predict"], env={"COLUMNS": "180"})
+
+    assert result.exit_code == 0
+    assert '"num_diffusion_samples": 1' in result.stdout
+
+
 def test_foundry_workflows_graph_supports_mounted_workflows(hub_api_fixture) -> None:
     result = runner.invoke(app, ["workflows", "graph", "--workflow", "fragment-analysis"])
 
@@ -403,6 +464,101 @@ def test_foundry_workflows_run_stages_generic_input_and_params(hub_api_fixture)
         assert body["inputs"]["molecules.csv"] == "smiles,name\nCCO,ethanol\n"
 
 
+def test_foundry_workflows_run_serializes_inline_validated_model_params(hub_api_fixture) -> None:
+    result = runner.invoke(
+        app,
+        [
+            "workflows",
+            "run",
+            "--workflow",
+            "predict",
+            "--model-params",
+            '{"seeds":[7,9],"num_diffusion_samples":3}',
+        ],
+    )
+
+    assert result.exit_code == 0
+    body = hub_api_fixture["create_foundry_run"][0]
+    assert json.loads(body["params"]["modelParams"]) == {
+        "num_diffusion_samples": 3,
+        "seeds": [7, 9],
+    }
+    assert body["params"]["model"] == "openfold3"
+    assert body["params"]["weight"] == "0.0.0"
+
+
+def test_foundry_workflows_run_loads_model_params_from_json_file(tmp_path: Path, hub_api_fixture) -> None:
+    params_file = tmp_path / "model-params.json"
+    params_file.write_text('{"seeds":[7],"num_diffusion_samples":2}', encoding="utf-8")
+
+    result = runner.invoke(
+        app,
+        ["workflows", "run", "--workflow", "predict", "--model-params", f"@{params_file}"],
+    )
+
+    assert result.exit_code == 0
+    assert json.loads(hub_api_fixture["create_foundry_run"][0]["params"]["modelParams"]) == {
+        "seeds": [7],
+        "num_diffusion_samples": 2,
+    }
+
+
+def test_foundry_workflows_run_serializes_selected_weight(hub_api_fixture) -> None:
+    result = runner.invoke(
+        app,
+        ["workflows", "run", "--workflow", "predict", "--weight", "0.3.0"],
+    )
+
+    assert result.exit_code == 0
+    assert hub_api_fixture["create_foundry_run"][0]["params"] == {"model": "openfold3", "weight": "0.3.0"}
+
+
+def test_foundry_workflows_run_preserves_predict_request_filename(tmp_path: Path, hub_api_fixture) -> None:
+    request = tmp_path / "request-protein-ligand.json"
+    request.write_text('{"queries": []}', encoding="utf-8")
+
+    result = runner.invoke(app, ["workflows", "run", "--workflow", "predict", "--input", str(request)])
+
+    assert result.exit_code == 0
+    assert hub_api_fixture["create_foundry_run"][0]["inputs"] == {"request-protein-ligand.json": '{"queries": []}'}
+
+
+def test_foundry_workflows_run_rejects_model_params_outside_schema(hub_api_fixture) -> None:
+    result = runner.invoke(
+        app,
+        [
+            "workflows",
+            "run",
+            "--workflow",
+            "predict",
+            "--model-params",
+            '{"seed":7}',
+        ],
+    )
+
+    assert result.exit_code != 0
+    assert "invalid --model-params" in result.stderr
+    assert hub_api_fixture["create_foundry_run"] == []
+
+
+def test_foundry_workflows_run_rejects_raw_model_params(hub_api_fixture) -> None:
+    result = runner.invoke(
+        app,
+        [
+            "workflows",
+            "run",
+            "--workflow",
+            "predict",
+            "--param",
+            'modelParams={"seeds":[7]}',
+        ],
+    )
+
+    assert result.exit_code != 0
+    assert "use --model-params" in result.stderr
+    assert hub_api_fixture["create_foundry_run"] == []
+
+
 def test_foundry_list_shows_parallel_active_steps(monkeypatch) -> None:
     monkeypatch.setattr(
         "apherisfold_cli.commands.foundry.list_foundry_runs",
@@ -695,14 +851,14 @@ def test_login_requires_profile_or_url() -> None:
         result = runner.invoke(app, ["login"])
         try:
             assert result.exit_code == 2
-            assert "Usage: apherisfold login --url HUB_URL [--callback-host HOST]" in result.stdout
+            assert "Usage: apheris-foundry login --url HUB_URL [--callback-host HOST]" in result.stdout
             assert "Login Options" in result.stdout
             assert "Built-In Profiles" not in result.stdout
             assert "--profile" not in result.stdout
             assert "apheris-integ" not in result.stdout
             assert "apheris-staging" not in result.stdout
             assert "Examples" in result.stdout
-            assert "apherisfold login --url https://hub.example.com" in result.stdout
+            assert "apheris-foundry login --url https://hub.example.com" in result.stdout
             assert "--callback-host" in result.stdout
             assert "localhost" in result.stdout
         finally:

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/tests/test_hub_requests.py

@@ -17,6 +17,7 @@ from apherisfold_cli.core.hub_requests import (
     get_foundry_run,
     get_foundry_run_logs,
     get_foundry_workflow,
+    get_model_schema,
     list_foundry_runs,
     list_foundry_workflows,
 )
@@ -189,6 +190,21 @@ def test_get_foundry_workflow_encodes_id(tmp_path: Path, monkeypatch) -> None:
     assert "fragment-analysis" in seen_url[0]
 
 
+def test_get_model_schema_encodes_model_selection(tmp_path: Path, monkeypatch) -> None:
+    _save_refreshable_session(tmp_path, monkeypatch)
+    seen_url: list[str] = []
+
+    def fake_urlopen(request: urllib.request.Request, **_kwargs: object) -> FakeResponse:
+        seen_url.append(request.full_url)
+        return FakeResponse(b'{"paths": {}}')
+
+    monkeypatch.setattr("apherisfold_cli.core.hub_requests.urllib.request.urlopen", fake_urlopen)
+    assert get_model_schema(model_version_id="openfold3:0.0.0", weight_version="0.0.0", capability="inference") == {
+        "paths": {}
+    }
+    assert "/api/v1/schemas/openfold3%3A0.0.0/0.0.0?capability=inference" in seen_url[0]
+
+
 # ---------------------------------------------------------------------------
 # get_foundry_run_logs
 # ---------------------------------------------------------------------------

{apheris_foundry_cli-0.2.0 → apheris_foundry_cli-0.3.0}/tests/test_main.py

@@ -87,7 +87,7 @@ def test_main_writes_error_file_when_write_errors_set(monkeypatch, tmp_path) ->
     assert data["message"] == "Input error"
 
 
-def test_foundry_predict_input_uses_queries_json(tmp_path: Path) -> None:
+def test_foundry_predict_input_preserves_request_filename(tmp_path: Path) -> None:
     request = '{"queries": [{"chains": [{"chain_id": "A", "polymer_type": "protein", "sequence": "ACDE"}]}]}'
     request_path = tmp_path / "request-minimal.json"
     request_path.write_text(request, encoding="utf-8")
@@ -95,8 +95,8 @@ def test_foundry_predict_input_uses_queries_json(tmp_path: Path) -> None:
     inputs = _foundry_input_files("predict", [request_path])
 
     assert inputs is not None
-    assert list(inputs) == ["queries.json"]
-    assert inputs["queries.json"] == request
+    assert list(inputs) == ["request-minimal.json"]
+    assert inputs["request-minimal.json"] == request
 
 
 def test_foundry_predict_new_schema_passes_through(tmp_path: Path) -> None:
@@ -109,7 +109,7 @@ def test_foundry_predict_new_schema_passes_through(tmp_path: Path) -> None:
     assert inputs == {"queries.json": request}
 
 
-def test_foundry_predict_preserves_msa_asset_and_rewrites_request_name(tmp_path: Path) -> None:
+def test_foundry_predict_preserves_msa_asset_and_request_name(tmp_path: Path) -> None:
     request = tmp_path / "request.json"
     request.write_text(
         '{"queries": [{"chains": [{"chain_id": "A", "sequence": "ACDE", "msa_path": "protein.a3m"}]}]}',
@@ -121,7 +121,7 @@ def test_foundry_predict_preserves_msa_asset_and_rewrites_request_name(tmp_path:
     inputs = _foundry_input_files("predict", [request, msa])
 
     assert inputs == {
-        "queries.json": request.read_text(encoding="utf-8"),
+        "request.json": request.read_text(encoding="utf-8"),
         "protein.a3m": "##4\nA\n",
     }
 

apheris_foundry_cli-0.2.0/src/apherisfold_cli/version.py

@@ -1 +0,0 @@
-__version__ = "0.2.0"