anta-database 0.4.2__tar.gz → 0.4.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (60) hide show
  1. {anta_database-0.4.2 → anta_database-0.4.3}/PKG-INFO +1 -1
  2. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/database/database.py +15 -0
  3. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/plotting/plotting_pism.py +16 -2
  4. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/PKG-INFO +1 -1
  5. anta_database-0.4.3/anta_database.egg-info/scm_version.json +8 -0
  6. anta_database-0.4.2/anta_database.egg-info/scm_version.json +0 -8
  7. {anta_database-0.4.2 → anta_database-0.4.3}/.github/workflows/deploy.yml +0 -0
  8. {anta_database-0.4.2 → anta_database-0.4.3}/.github/workflows/release.yml +0 -0
  9. {anta_database-0.4.2 → anta_database-0.4.3}/.gitignore +0 -0
  10. {anta_database-0.4.2 → anta_database-0.4.3}/LICENSE +0 -0
  11. {anta_database-0.4.2 → anta_database-0.4.3}/README.md +0 -0
  12. {anta_database-0.4.2 → anta_database-0.4.3}/ROADMAP.md +0 -0
  13. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/__init__.py +0 -0
  14. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/compiling/__init__.py +0 -0
  15. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/compiling/compile.py +0 -0
  16. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/compiling/reconnect.py +0 -0
  17. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/compiling/zarr_converter_simple.py +0 -0
  18. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.cpg +0 -0
  19. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.dbf +0 -0
  20. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.parquet +0 -0
  21. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.prj +0 -0
  22. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.shp +0 -0
  23. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ANT_Basins_IMBIE2_v1.6.shx +0 -0
  24. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/GL.parquet +0 -0
  25. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coords_basins.cpg +0 -0
  26. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coords_basins.dbf +0 -0
  27. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coords_basins.prj +0 -0
  28. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coords_basins.shp +0 -0
  29. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coords_basins.shx +0 -0
  30. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/centeroid_coors_basins.parquet +0 -0
  31. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/convert_data.py +0 -0
  32. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/ice-core-coordinates.csv +0 -0
  33. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/data/site-coords.parquet +0 -0
  34. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/database/__init__.py +0 -0
  35. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/figures/AntA_38ka.png +0 -0
  36. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/indexing/__init__.py +0 -0
  37. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/indexing/index_database.py +0 -0
  38. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/plotting/__init__.py +0 -0
  39. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/plotting/plotting.py +0 -0
  40. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/test_interactive.py +0 -0
  41. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database/test_interactive_full.py +0 -0
  42. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/SOURCES.txt +0 -0
  43. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/dependency_links.txt +0 -0
  44. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/requires.txt +0 -0
  45. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/scm_file_list.json +0 -0
  46. {anta_database-0.4.2 → anta_database-0.4.3}/anta_database.egg-info/top_level.txt +0 -0
  47. {anta_database-0.4.2 → anta_database-0.4.3}/book/_config.yml +0 -0
  48. {anta_database-0.4.2 → anta_database-0.4.3}/book/_toc.yml +0 -0
  49. {anta_database-0.4.2 → anta_database-0.4.3}/book/advanced.md +0 -0
  50. {anta_database-0.4.2 → anta_database-0.4.3}/book/contact.md +0 -0
  51. {anta_database-0.4.2 → anta_database-0.4.3}/book/contribute.md +0 -0
  52. {anta_database-0.4.2 → anta_database-0.4.3}/book/figures/Overview_all.png +0 -0
  53. {anta_database-0.4.2 → anta_database-0.4.3}/book/intro.md +0 -0
  54. {anta_database-0.4.2 → anta_database-0.4.3}/book/logo.png +0 -0
  55. {anta_database-0.4.2 → anta_database-0.4.3}/book/pism_example.ipynb +0 -0
  56. {anta_database-0.4.2 → anta_database-0.4.3}/book/quick_start.ipynb +0 -0
  57. {anta_database-0.4.2 → anta_database-0.4.3}/book/references.bib +0 -0
  58. {anta_database-0.4.2 → anta_database-0.4.3}/book/requirements.txt +0 -0
  59. {anta_database-0.4.2 → anta_database-0.4.3}/pyproject.toml +0 -0
  60. {anta_database-0.4.2 → anta_database-0.4.3}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: anta_database
3
- Version: 0.4.2
3
+ Version: 0.4.3
4
4
  Summary: SQLite database for the AntArchitecture Community Data
5
5
  Author: Antoine Hermant
6
6
  Author-email: antoine.hermant@etik.com
@@ -47,6 +47,21 @@ class Database:
47
47
  if index_database:
48
48
  indexing = IndexDatabase(self._db_dir)
49
49
  indexing.index_database()
50
+ if not os.path.exists(database_dir):
51
+ print("WARNING: AntADatabase not found. Try a different path.")
52
+ if not os.path.isabs(database_dir):
53
+ print(
54
+ f"Note: '{database_dir}' is a relative path. Try absolute path to AntADatabase"
55
+ )
56
+ return
57
+ elif not os.path.exists(f"{database_dir}/{file_db}"):
58
+ print(
59
+ f"WARNING: {file_db} not found in {database_dir}. Check if the AntADatabase is complete."
60
+ )
61
+ return
62
+ elif os.path.exists(f"{database_dir}/{file_db}"):
63
+ print(f"AntADatabase successfully initiated")
64
+ return
50
65
 
51
66
  def _build_query_and_params(
52
67
  self,
@@ -84,6 +84,7 @@ class PISMPlotting:
84
84
  title: Optional[str] = None,
85
85
  xlim: Optional[tuple] = (None, None),
86
86
  ylim: Optional[tuple] = (None, None),
87
+ sel_method: Optional[str] = "nearest",
87
88
  scale_factor: float = 1.0,
88
89
  marker_size: Optional[float] = 2,
89
90
  cmap: Optional["LinearSegmentedColormap"] = None,
@@ -108,6 +109,7 @@ class PISMPlotting:
108
109
  title=title,
109
110
  xlim=xlim,
110
111
  ylim=ylim,
112
+ sel_method=sel_method,
111
113
  scale_factor=scale_factor,
112
114
  marker_size=marker_size,
113
115
  cmap=cmap,
@@ -127,6 +129,7 @@ class PISMPlotting:
127
129
  downsampling_factor: Optional[int] = None,
128
130
  cpus: int = 2,
129
131
  firn_correction: Optional[int] = 31,
132
+ sel_method: Optional[str] = "nearest",
130
133
  title: Optional[str] = None,
131
134
  xlim: Optional[tuple] = (None, None),
132
135
  ylim: Optional[tuple] = (None, None),
@@ -153,6 +156,7 @@ class PISMPlotting:
153
156
  downsampling_factor=downsampling_factor,
154
157
  cpus=cpus,
155
158
  firn_correction=firn_correction,
159
+ sel_method=sel_method,
156
160
  title=title,
157
161
  xlim=xlim,
158
162
  ylim=ylim,
@@ -226,7 +230,7 @@ class PISMPlotting:
226
230
  ds_depth_interp = griddata(
227
231
  pism_points,
228
232
  pism_ds.isochronal_layer_depth.sel(
229
- deposition_time=age_seconds
233
+ deposition_time=age_seconds, method=self.sel_method
230
234
  ).values.flatten(),
231
235
  fl_line_xy,
232
236
  method="linear",
@@ -264,6 +268,7 @@ class PISMPlotting:
264
268
  downsampling_factor: Optional[int] = None,
265
269
  age_offset: Optional[int] = -1950,
266
270
  firn_correction: Optional[int] = 31,
271
+ sel_method: Optional[str] = None,
267
272
  cpus: int = 4,
268
273
  title: Optional[str] = None,
269
274
  xlim: Optional[tuple] = (None, None),
@@ -301,6 +306,7 @@ class PISMPlotting:
301
306
  self.downsampling_factor = downsampling_factor
302
307
  self.firn_correction = firn_correction
303
308
  self.elevation = elevation
309
+ self.sel_method = sel_method
304
310
 
305
311
  # if save:
306
312
  # matplotlib.use('Agg')
@@ -499,7 +505,14 @@ class PISMPlotting:
499
505
 
500
506
  cmap = self._custom_cmap_density()
501
507
  colors = [cmap(i) for i in np.linspace(0.1, 0.9, len(metadata_impl["age"]))]
502
- for age, color in zip(list(map(int, common_values)), colors):
508
+ print(
509
+ "\nInterpolating",
510
+ # len(common_values),
511
+ len(ages),
512
+ "PISM isochronal layers along the transect...",
513
+ )
514
+ # for age, color in zip(list(map(int, common_values)), colors):
515
+ for age, color in zip(list(map(int, ages)), colors):
503
516
  if age not in ds.IRH_AGE:
504
517
  print(
505
518
  f"{metadata_impl['flight_id'][0]} does not contain age {age}, skipping"
@@ -519,6 +532,7 @@ class PISMPlotting:
519
532
  age_converted = -(age + age_offset) * (3600 * 24 * 365)
520
533
  pism_layer = pism_ds.isochronal_layer_depth.sel(
521
534
  deposition_time=age_converted,
535
+ method=self.sel_method,
522
536
  ).values.flatten()
523
537
 
524
538
  depth_offset = 31 + 12 * 0.038
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: anta_database
3
- Version: 0.4.2
3
+ Version: 0.4.3
4
4
  Summary: SQLite database for the AntArchitecture Community Data
5
5
  Author: Antoine Hermant
6
6
  Author-email: antoine.hermant@etik.com
@@ -0,0 +1,8 @@
1
+ {
2
+ "tag": "0.4.3",
3
+ "distance": 0,
4
+ "node": "g01dabe69b644149e4aca0413c16fd2e1419745be",
5
+ "dirty": false,
6
+ "branch": "HEAD",
7
+ "node_date": "2026-08-07"
8
+ }
@@ -1,8 +0,0 @@
1
- {
2
- "tag": "0.4.2",
3
- "distance": 0,
4
- "node": "gecc1a9d04f84149cfcd28fbf983da7b256371eef",
5
- "dirty": false,
6
- "branch": "HEAD",
7
- "node_date": "2026-08-06"
8
- }
File without changes
File without changes
File without changes
File without changes
File without changes