algorithm-nexus 0.2.1__tar.gz

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Files changed (30) hide show
  1. algorithm_nexus-0.2.1/LICENSE +201 -0
  2. algorithm_nexus-0.2.1/PKG-INFO +319 -0
  3. algorithm_nexus-0.2.1/README.md +283 -0
  4. algorithm_nexus-0.2.1/pyproject.toml +82 -0
  5. algorithm_nexus-0.2.1/setup.cfg +4 -0
  6. algorithm_nexus-0.2.1/src/algorithm_nexus/__init__.py +4 -0
  7. algorithm_nexus-0.2.1/src/algorithm_nexus/cli.py +101 -0
  8. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/__init__.py +6 -0
  9. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/ado_validator.py +176 -0
  10. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/benchmark_manager.py +1264 -0
  11. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/get.py +120 -0
  12. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/list.py +349 -0
  13. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/run.py +162 -0
  14. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/utils.py +584 -0
  15. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/validate.py +683 -0
  16. algorithm_nexus-0.2.1/src/algorithm_nexus/commands/venv_manager.py +158 -0
  17. algorithm_nexus-0.2.1/src/algorithm_nexus/models.py +408 -0
  18. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/PKG-INFO +319 -0
  19. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/SOURCES.txt +28 -0
  20. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/dependency_links.txt +1 -0
  21. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/entry_points.txt +2 -0
  22. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/requires.txt +26 -0
  23. algorithm_nexus-0.2.1/src/algorithm_nexus.egg-info/top_level.txt +1 -0
  24. algorithm_nexus-0.2.1/tests/test_cli_list_get.py +429 -0
  25. algorithm_nexus-0.2.1/tests/test_cli_run.py +308 -0
  26. algorithm_nexus-0.2.1/tests/test_cli_validation.py +255 -0
  27. algorithm_nexus-0.2.1/tests/test_models.py +479 -0
  28. algorithm_nexus-0.2.1/tests/test_utils.py +192 -0
  29. algorithm_nexus-0.2.1/tests/test_validate_benchmarks.py +271 -0
  30. algorithm_nexus-0.2.1/tests/test_validate_logical_benchmarks.py +113 -0
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@@ -0,0 +1,319 @@
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+ Metadata-Version: 2.4
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+ Name: algorithm-nexus
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+ Version: 0.2.1
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+ Summary: A comprehensive library for AI model delivery, testing, and benchmarking
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+ Author-email: Christian Pinto <christian.pinto@ibm.com>
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+ Maintainer-email: Christian Pinto <christian.pinto@ibm.com>
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+ Project-URL: Homepage, https://github.com/IBM/algorithm-nexus
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+ Project-URL: Issues, https://github.com/IBM/algorithm-nexus/issues
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+ Project-URL: Repository, https://github.com/IBM/algorithm-nexus
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+ Requires-Python: <3.14,>=3.12
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Provides-Extra: candidate
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+ Requires-Dist: bmfm-targets[vllm]>=0.20.0; extra == "candidate"
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+ Requires-Dist: opencv-python-headless!=5.0.0.93; extra == "candidate"
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+ Requires-Dist: terrakit==0.2.0; extra == "candidate"
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+ Requires-Dist: terratorch[vllm]==1.2.10; extra == "candidate"
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+ Requires-Dist: vllm==0.24.0; extra == "candidate"
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+ Provides-Extra: cli
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+ Requires-Dist: ado-core>=2.0; extra == "cli"
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+ Requires-Dist: pydantic>=2.13.3; extra == "cli"
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+ Requires-Dist: pyyaml>=6.0.3; extra == "cli"
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+ Requires-Dist: rich>=15.0.0; extra == "cli"
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+ Requires-Dist: typer>=0.25.0; extra == "cli"
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+ Provides-Extra: ecosystem
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+ Requires-Dist: bmfm-targets; extra == "ecosystem"
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+ Requires-Dist: terrakit>=0.2.0; extra == "ecosystem"
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+ Requires-Dist: terratorch>=1.2.7; extra == "ecosystem"
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+ Requires-Dist: tokamind; extra == "ecosystem"
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+ Provides-Extra: product
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+ Requires-Dist: opencv-python-headless!=5.0.0.93; extra == "product"
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+ Requires-Dist: terrakit==0.2.0; extra == "product"
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+ Requires-Dist: terratorch[vllm]==1.2.10; extra == "product"
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+ Requires-Dist: vllm==0.24.0; extra == "product"
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+ Dynamic: license-file
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+
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+ # Algorithm Nexus
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+
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+ [![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0)
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+
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+ Algorithm Nexus packages a diverse set of AI algorithm stacks — models,
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+ frameworks, and related tooling — within a unified Python environment. Each
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+ algorithm stack is described by a **Nexus package**: a small metadata directory
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+ that records the package's dependencies, models, and validation requirements.
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+ The `nexus` CLI validates Nexus packages and supports contributors in keeping
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+ their packages well-formed.
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+
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+ ## Roadmap
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+
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+ ### Version 0.1 (Alpha, End of April 2026)
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+
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+ - **Project requirements for dependencies resolution, Nexus package definition,
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+ testing and benchmarking**
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+ - **Protocol and tools for cross package dependency resolution in place**,
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+ supporting with/without vLLM with latest and pinned scenarios
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+ - **Benchmarking and testing protocols defined**
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+ - **Nexus package and model owner responsibilities defined**
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+ - **Rules for contributing a new Nexus Package defined**
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+ - **Initial CI in place**, supporting Nexus package structure validation
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+ (without vLLM validation), dependency resolution and models inference testing
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+ - **Nexus package for TerraTorch integrated**
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+
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+ ### Version 0.2 (Beta, End of May 2026)
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+
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+ - **Requirements for models integration with vLLM defined**
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+ - **CI workflows extended** with validation of vLLM integration requirements and
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+ benchmarking tasks
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+ - **Agentic skills implemented** for generation of a Nexus package and PR
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+ - **Agentic functionalities implemented** for supporting the implementation of
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+ the vLLM plugins required for a model
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+ - **Integration of
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+ [Tokamind](https://github.com/UKAEA-IBM-STFC-Fusion-FMs/tokamind) Fusion
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+ models**
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+
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+ ### Version 0.3 (First Release, End of June 2026)
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+
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+ - **Agentic functionalities extended** to supporting the deployment of the
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+ integrated models
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+ - **Integration of additional algorithm packages from beta-test phase**
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+ - **Models scoreboard implemented** to track the performance of the integrated
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+ models
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+
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+ ## Installation
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+
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+ Choose the section that matches your goal:
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+
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+ - [I want to install algorithm nexus packages in my environment](#installing-algorithm-nexus-packages-in-your-environment)
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+ - [I want to contribute my Python library to Algorithm Nexus](#contributing-your-python-library-to-algorithm-nexus)
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+ - [I want to develop Algorithm Nexus itself](#developing-algorithm-nexus)
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+
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+ ### Installing algorithm nexus packages in your environment
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+
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+ Algorithm Nexus is **not published to PyPI**. All installs reference a tagged
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+ [GitHub Release](https://github.com/IBM/algorithm-nexus/releases).
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+
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+ Each release ships three mutually-exclusive dependency variants. Pick the one
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+ that matches your environment:
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+
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+ | Variant | vLLM included | Intended use |
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+ | ----------- | ---------------- | ------------------------------------- |
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+ | `ecosystem` | No | Research and exploration environments |
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+ | `candidate` | Yes (latest) | Pre-production evaluation |
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+ | `product` | Yes (stable pin) | Production deployments |
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+
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+ #### Install a variant
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+
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+ Each release tag includes a pinned, hash-verified requirements file for every
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+ variant. Install using `uv`:
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+
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+ ```bash
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+ uv pip install -r https://raw.githubusercontent.com/IBM/algorithm-nexus/refs/tags/{version}/requirements-{variant}.txt
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+ ```
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+
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+ Replace `{version}` with the release tag (e.g. `v0.1.0`) and `{variant}` with
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+ `ecosystem`, `candidate`, or `product`.
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+
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+ ### Contributing your python library to algorithm nexus
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+
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+ > **Note:** This project is currently in closed beta. Contributions are open to
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+ > IBM contributors only.
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+
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+ Contributing a package means adding your Python library as an Algorithm Nexus
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+ dependency, creating a Nexus package metadata directory under `packages/`, and
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+ opening a pull request from a fork of the nexus repository.
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+
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+ Before you begin you will need:
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+
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+ - Your algorithm package publicly available on GitHub
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+ - [`uv`](https://docs.astral.sh/uv/getting-started/installation/) installed
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+ - A
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+ [fork](https://docs.github.com/en/pull-requests/collaborating-with-pull-requests/working-with-forks/fork-a-repo)
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+ of this repository checked out locally
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+
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+ Set up your local environment:
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+
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+ ```bash
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+ cd algorithm-nexus
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+ uv sync --group dev --extra cli
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+ uv run pre-commit install
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+ ```
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+
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+ Then create a branch and follow one of the two paths below.
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+
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+ #### Option A — Coding Agent (Recommended)
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+
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+ An agent skill is available for adding Nexus packages. Open the algorithm nexus
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+ repository in your coding agent and ask it to add your python package to the
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+ nexus giving it your package repository URL e.g.
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+
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+ ```commandline
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+ Add the package at ${URL} to the nexus
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+ ```
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+
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+ replacing `${URL}` with your packages repo URL.
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+
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+ #### Option B — Manual
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+
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+ Follow the step-by-step guide in
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+ [`docs/contributing/add_new_nexus_package.md`](docs/contributing/add_new_nexus_package.md),
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+ which covers variant classification, `nexus.yaml` authoring, dependency
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+ resolution with `uv add`, and opening a PR.
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+
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+ #### Before opening a pull request
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+
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+ Read [CONTRIBUTING.md](CONTRIBUTING.md) for DCO sign-off requirements, commit
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+ message conventions (Conventional Commits / Angular style), and coding style
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+ checks. All checks must pass before a PR can be merged.
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+
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+ ### Developing Algorithm Nexus
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+
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+ For IBM contributors working on the CLI, validation logic, tests, or CI
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+ infrastructure. This setup is a superset of the package contributor setup — it
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+ adds the `test` dependency group.
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+
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+ ```bash
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+ git clone https://github.com/IBM/algorithm-nexus.git
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+ cd algorithm-nexus
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+ uv sync --extra cli --group dev --group test
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+ uv run pre-commit install --install-hooks
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+ uv run pre-commit install --hook-type commit-msg
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+ ```
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+
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+ Full details on coding standards, legal requirements (DCO), commit conventions,
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+ and manual lint commands are in [CONTRIBUTING.md](CONTRIBUTING.md).
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+
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+ ## CLI Reference
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+
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+ Algorithm Nexus provides the `nexus` CLI for working with Nexus packages.
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+
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+ ### Validating nexus packages
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+
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+ To validate the structure and configuration of a Nexus package run:
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+
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+ ```bash
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+ nexus validate package /path/to/package
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+ ```
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+
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+ This will examine the following:
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+
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+ - **Package structure**: Verifies required files (`nexus.yaml`, `model.yaml`)
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+ and directories exist
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+ - **YAML syntax**: Ensures all configuration files are valid YAML
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+ - **Schema validation**: Validates configuration against Pydantic models for
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+ correct field types and required fields
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+ - **Cross-validation**: Checks dependencies between configurations
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+ - **Model declarations**: Ensures all models have corresponding directories
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+ - **Duplicate detection**: Checks for duplicate HuggingFace model IDs
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+
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+ In case of validation errors, a detailed report guides you to fix each issue.
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+
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+ ### Discovering packages and benchmarks
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+
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+ Algorithm Nexus provides commands to discover and list packages, benchmark
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+ packages, and experiments across your repository.
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+
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+ #### List all Nexus packages
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+
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+ ```bash
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+ nexus list packages [PACKAGES_ROOT]
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+ ```
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+
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+ Lists all valid Nexus packages found in the packages directory (default:
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+ `./packages`). Supports JSON and CSV output formats with `-o json` or `-o csv`.
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+ Use `--strict` to show warnings for packages that fail to load.
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+
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+ **Example:**
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+
228
+ ```bash
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+ nexus list packages ./packages --strict
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+ ```
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+
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+ #### List benchmark packages
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+
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+ ```bash
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+ nexus list benchmark-packages [PACKAGES_ROOT]
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+ ```
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+
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+ Lists all benchmark packages registered across Nexus packages. Shows which Nexus
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+ packages use each benchmark package. Filter by a specific Nexus package with
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+ `--nexus-package`.
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+
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+ **Example:**
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+
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+ ```bash
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+ nexus list benchmark-packages ./packages --nexus-package terratorch
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+ ```
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+
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+ #### List benchmark experiments
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+
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+ ```bash
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+ nexus list benchmark-experiments [PACKAGES_ROOT]
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+ ```
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+
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+ Lists all benchmark experiments with their associated benchmark packages and
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+ Nexus packages. Filter by a specific Nexus package with `--nexus-package`.
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+
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+ **Example:**
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+
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+ ```bash
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+ nexus list benchmark-experiments ./packages -o json
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+ ```
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+
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+ #### Get benchmark requirements
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+
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+ ```bash
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+ nexus get benchmark-requirements NEXUS_PACKAGE [PACKAGES_ROOT]
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+ ```
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+
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+ Retrieves the benchmark requirement specifiers for a specific Nexus package.
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+ Output in requirements.txt format with `-o txt` for use with pip.
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+
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+ **Example:**
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+
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+ ```bash
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+ nexus get benchmark-requirements terratorch ./packages -o txt --output-file requirements.txt
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+ ```
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+
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+ ### Output formats
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+
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+ Most list commands support multiple output formats:
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+
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+ - **Table** (default): Human-readable table output
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+ - **JSON** (`-o json`): Machine-readable JSON format
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+ - **CSV** (`-o csv`): Comma-separated values for spreadsheets
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+ - **TXT** (`-o txt`): Requirements file format (get commands only)
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+
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+ Use `--output-file` to write output to a file instead of stdout.
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+
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+ ## Contributing
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+
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+ This project is currently in closed beta. We are not accepting external
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+ contributions at this time.
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+
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+ For IBM contributors:
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+
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+ - See [CONTRIBUTING.md](CONTRIBUTING.md) for development setup and guidelines.
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+ - See
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+ [`docs/contributing/add_new_nexus_package.md`](docs/contributing/add_new_nexus_package.md)
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+ for step-by-step instructions for contributing a Nexus package.
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+
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+ ## License
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+
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+ This project is licensed under the Apache License 2.0 — see the
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+ [LICENSE](LICENSE) file for details.
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+
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+ ## Maintainers
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+
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+ See [MAINTAINERS.md](MAINTAINERS.md) for the list of project maintainers.
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+
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+ ## Support
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+
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+ - **Issues**: [GitHub Issues](https://github.com/IBM/algorithm-nexus/issues)
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+ - **Discussions**:
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+ [GitHub Discussions](https://github.com/IBM/algorithm-nexus/discussions)
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+
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+ ## Acknowledgments
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+
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+ This project is part of IBM's commitment to open-source AI infrastructure and
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+ collaboration with Red Hat.