aiagents4pharma 1.6.1__tar.gz → 1.6.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (42) hide show
  1. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/PKG-INFO +5 -1
  2. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/README.md +4 -0
  3. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma.egg-info/PKG-INFO +5 -1
  4. aiagents4pharma-1.6.2/release_version.txt +1 -0
  5. aiagents4pharma-1.6.1/release_version.txt +0 -1
  6. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/LICENSE +0 -0
  7. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/__init__.py +0 -0
  8. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/__init__.py +0 -0
  9. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/models/__init__.py +0 -0
  10. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/models/basico_model.py +0 -0
  11. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/models/sys_bio_model.py +0 -0
  12. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/__init__.py +0 -0
  13. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/ask_question.py +0 -0
  14. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/custom_plotter.py +0 -0
  15. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/fetch_parameters.py +0 -0
  16. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/model_description.py +0 -0
  17. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/search_models.py +0 -0
  18. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2biomodels/tools/simulate_model.py +0 -0
  19. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/__init__.py +0 -0
  20. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/agents/__init__.py +0 -0
  21. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/agents/scp_agent.py +0 -0
  22. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/states/__init__.py +0 -0
  23. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/states/state_talk2cells.py +0 -0
  24. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2cells/tools/__init__.py +0 -0
  25. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/__init__.py +0 -0
  26. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/datasets/__init__.py +0 -0
  27. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/datasets/biobridge_primekg.py +0 -0
  28. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/datasets/dataset.py +0 -0
  29. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/datasets/primekg.py +0 -0
  30. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/datasets/starkqa_primekg.py +0 -0
  31. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/__init__.py +0 -0
  32. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/embeddings/__init__.py +0 -0
  33. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/embeddings/embeddings.py +0 -0
  34. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/embeddings/huggingface.py +0 -0
  35. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/embeddings/sentence_transformer.py +0 -0
  36. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma/talk2knowledgegraphs/utils/kg_utils.py +0 -0
  37. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma.egg-info/SOURCES.txt +0 -0
  38. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma.egg-info/dependency_links.txt +0 -0
  39. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma.egg-info/requires.txt +0 -0
  40. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/aiagents4pharma.egg-info/top_level.txt +0 -0
  41. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/pyproject.toml +0 -0
  42. {aiagents4pharma-1.6.1 → aiagents4pharma-1.6.2}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: aiagents4pharma
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- Version: 1.6.1
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+ Version: 1.6.2
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  Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D
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  Classifier: Programming Language :: Python :: 3
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  Classifier: License :: OSI Approved :: MIT License
@@ -54,6 +54,7 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  - **Talk2BioModels**: Engage directly with mathematical models in systems biology.
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  - **Talk2Cells** *(Work in progress)*: Query and analyze sequencing data with ease.
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  - **Talk2KnowledgeGraphs** *(Work in progress)*: Access and explore complex biological knowledge graphs for insightful data connections.
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+ - **Talk2Competitors** *(Coming soon)*: Get recommendations for articles related to your choice. Download, query, and write/retrieve them to your reference manager (currently supporting Zotero).
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  ---
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@@ -75,6 +76,8 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  **Talk2KnowledgeGraphs** is an agent designed to enable interaction with biological knowledge graphs (KGs). KGs integrate vast amounts of structured biological data into a format that highlights relationships between entities, such as proteins, genes, and diseases.
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+ ### 4. Talk2KnowledgeGraphs *(Coming soon)*
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  ## Getting Started
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  ### Prerequisites
@@ -173,6 +176,7 @@ Check out our [CONTRIBUTING.md](CONTRIBUTING.md) for more information.
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  - **User Interface**: Interactive web UI for all agents.
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  - **Talk2Cells**: Integration of sequencing data analysis tools.
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  - **Talk2KnowledgeGraphs**: Interface for biological knowledge graph interaction.
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+ - **Talk2Competitors**
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  We’re excited to bring AIAgents4Pharma to the bioinformatics and pharmaceutical research community. Together, let’s make data-driven biological research more accessible and insightful.
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@@ -9,6 +9,7 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  - **Talk2BioModels**: Engage directly with mathematical models in systems biology.
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  - **Talk2Cells** *(Work in progress)*: Query and analyze sequencing data with ease.
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  - **Talk2KnowledgeGraphs** *(Work in progress)*: Access and explore complex biological knowledge graphs for insightful data connections.
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+ - **Talk2Competitors** *(Coming soon)*: Get recommendations for articles related to your choice. Download, query, and write/retrieve them to your reference manager (currently supporting Zotero).
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  ---
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@@ -30,6 +31,8 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  **Talk2KnowledgeGraphs** is an agent designed to enable interaction with biological knowledge graphs (KGs). KGs integrate vast amounts of structured biological data into a format that highlights relationships between entities, such as proteins, genes, and diseases.
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+ ### 4. Talk2KnowledgeGraphs *(Coming soon)*
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  ## Getting Started
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  ### Prerequisites
@@ -128,6 +131,7 @@ Check out our [CONTRIBUTING.md](CONTRIBUTING.md) for more information.
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  - **User Interface**: Interactive web UI for all agents.
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  - **Talk2Cells**: Integration of sequencing data analysis tools.
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  - **Talk2KnowledgeGraphs**: Interface for biological knowledge graph interaction.
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+ - **Talk2Competitors**
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  We’re excited to bring AIAgents4Pharma to the bioinformatics and pharmaceutical research community. Together, let’s make data-driven biological research more accessible and insightful.
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: aiagents4pharma
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- Version: 1.6.1
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+ Version: 1.6.2
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  Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D
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  Classifier: Programming Language :: Python :: 3
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  Classifier: License :: OSI Approved :: MIT License
@@ -54,6 +54,7 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  - **Talk2BioModels**: Engage directly with mathematical models in systems biology.
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55
  - **Talk2Cells** *(Work in progress)*: Query and analyze sequencing data with ease.
56
56
  - **Talk2KnowledgeGraphs** *(Work in progress)*: Access and explore complex biological knowledge graphs for insightful data connections.
57
+ - **Talk2Competitors** *(Coming soon)*: Get recommendations for articles related to your choice. Download, query, and write/retrieve them to your reference manager (currently supporting Zotero).
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  ---
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@@ -75,6 +76,8 @@ Our toolkit currently consists of three intelligent agents, each designed to sim
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  **Talk2KnowledgeGraphs** is an agent designed to enable interaction with biological knowledge graphs (KGs). KGs integrate vast amounts of structured biological data into a format that highlights relationships between entities, such as proteins, genes, and diseases.
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+ ### 4. Talk2KnowledgeGraphs *(Coming soon)*
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+
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  ## Getting Started
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  ### Prerequisites
@@ -173,6 +176,7 @@ Check out our [CONTRIBUTING.md](CONTRIBUTING.md) for more information.
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  - **User Interface**: Interactive web UI for all agents.
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  - **Talk2Cells**: Integration of sequencing data analysis tools.
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  - **Talk2KnowledgeGraphs**: Interface for biological knowledge graph interaction.
179
+ - **Talk2Competitors**
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180
 
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  We’re excited to bring AIAgents4Pharma to the bioinformatics and pharmaceutical research community. Together, let’s make data-driven biological research more accessible and insightful.
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+ v1.6.2
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- v1.6.1
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