aiagents4pharma 1.26.1__tar.gz → 1.27.0__tar.gz

{aiagents4pharma-1.26.1 → aiagents4pharma-1.27.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: aiagents4pharma
-Version: 1.26.1
+Version: 1.27.0
 Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D.
 Classifier: Programming Language :: Python :: 3
 Classifier: License :: OSI Approved :: MIT License
@@ -91,9 +91,12 @@ Our toolkit currently consists of the following agents:
 ![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
 
 ### Installation
+_Please use version 1.26.2 or later for better support with NVIDIA NIM models._
 
 #### Option 1: PyPI
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 ```bash
 pip install aiagents4pharma
 ```
@@ -210,6 +213,8 @@ docker compose down
 
 #### Option 3: git
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 1. **Clone the repository:**
    ```bash
    git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma
@@ -270,6 +275,8 @@ docker compose down
    export ZOTERO_USER_ID=....
    ```
 
+   _Please note that ZOTERO keys are requried only if you want to launch Talk2Scholars. For all the other agents, please ignore this step._
+
 5. **[Optional] Initialize LANGSMITH_API_KEY**
 
    ```bash

{aiagents4pharma-1.26.1 → aiagents4pharma-1.27.0}/README.md

@@ -26,9 +26,12 @@ Our toolkit currently consists of the following agents:
 ![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
 
 ### Installation
+_Please use version 1.26.2 or later for better support with NVIDIA NIM models._
 
 #### Option 1: PyPI
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 ```bash
 pip install aiagents4pharma
 ```
@@ -145,6 +148,8 @@ docker compose down
 
 #### Option 3: git
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 1. **Clone the repository:**
    ```bash
    git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma
@@ -205,6 +210,8 @@ docker compose down
    export ZOTERO_USER_ID=....
    ```
 
+   _Please note that ZOTERO keys are requried only if you want to launch Talk2Scholars. For all the other agents, please ignore this step._
+
 5. **[Optional] Initialize LANGSMITH_API_KEY**
 
    ```bash

aiagents4pharma-1.27.0/aiagents4pharma/talk2aiagents4pharma/configs/agents/main_agent/default.yaml

@@ -0,0 +1,16 @@
+_target_: agents.main_agent.get_app
+system_prompt: >
+  You are Talk2AIAgents4Pharma agent.
+  You are managing a team of the following 2 agents:
+   
+  1. Talk2Biomodels (T2B) agent: This agent can search and 
+  operate on mathematical models of biological systems. This
+  agent can also query an uploaded document/pdf/article. 
+   
+  2. Talk2KnowledgeGraphs (T2KG) agent: This agent can
+  reason over a knowledge graph of biological entities
+  and their relationships to answer subjective questions.
+  Do not call this agent for objective questions or questions
+  related to the mathematical models of biological systems.
+
+  Below mentioned are the prompts for each agent:

{aiagents4pharma-1.26.1 → aiagents4pharma-1.27.0}/aiagents4pharma.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: aiagents4pharma
-Version: 1.26.1
+Version: 1.27.0
 Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D.
 Classifier: Programming Language :: Python :: 3
 Classifier: License :: OSI Approved :: MIT License
@@ -91,9 +91,12 @@ Our toolkit currently consists of the following agents:
 ![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
 
 ### Installation
+_Please use version 1.26.2 or later for better support with NVIDIA NIM models._
 
 #### Option 1: PyPI
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 ```bash
 pip install aiagents4pharma
 ```
@@ -210,6 +213,8 @@ docker compose down
 
 #### Option 3: git
 
+![Python Version from PEP 621 TOML](https://img.shields.io/python/required-version-toml?tomlFilePath=https%3A%2F%2Fraw.githubusercontent.com%2FVirtualPatientEngine%2FAIAgents4Pharma%2Frefs%2Fheads%2Fmain%2Fpyproject.toml)
+
 1. **Clone the repository:**
    ```bash
    git clone https://github.com/VirtualPatientEngine/AIAgents4Pharma
@@ -270,6 +275,8 @@ docker compose down
    export ZOTERO_USER_ID=....
    ```
 
+   _Please note that ZOTERO keys are requried only if you want to launch Talk2Scholars. For all the other agents, please ignore this step._
+
 5. **[Optional] Initialize LANGSMITH_API_KEY**
 
    ```bash

aiagents4pharma-1.27.0/release_version.txt

@@ -0,0 +1 @@
+v1.27.0

aiagents4pharma-1.26.1/aiagents4pharma/talk2aiagents4pharma/configs/agents/main_agent/default.yaml

@@ -1,12 +0,0 @@
-_target_: agents.main_agent.get_app
-system_prompt: >
-  You are Talk2AIAgents4Pharma agent.
-  You are managing a team of the following 2 agents:
-   
-  1. Talk2Biomodels (T2B) agent: This agent can operate
-  on mathematical models of biological systems. This
-  agent can also query an uploaded document/pdf/article. 
-   
-  2. Talk2KnowledgeGraphs (T2KG) agent: This agent can
-  reason over a knowledge graph of biological entities
-  and their relationships.

aiagents4pharma-1.26.1/release_version.txt

@@ -1 +0,0 @@
-v1.26.1