aiagents4pharma 1.15.0__tar.gz → 1.15.1__tar.gz

{aiagents4pharma-1.15.0 → aiagents4pharma-1.15.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: aiagents4pharma
-Version: 1.15.0
+Version: 1.15.1
 Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D
 Classifier: Programming Language :: Python :: 3
 Classifier: License :: OSI Approved :: MIT License

aiagents4pharma-1.15.1/aiagents4pharma/configs/talk2biomodels/tools/ask_question/default.yaml

@@ -0,0 +1,39 @@
+_target_: talk2biomodels.tools.ask_question.AskQuestionTool
+steady_state_prompt: >
+  Following are header columns of the data:
+  `species_name`: Name of the species,
+  `compartment`: Compartment of the species,
+  `initial_concentration`: Concentration of the species at the start of steady state,
+  `steady_state_concentration`: Concentration of the species at steady state,
+  `steady_state_transition_time`: Time taken to reach steady state,
+  `display_name`: An alias for the species name.
+
+  Here are some instructions to help you answer questions:
+
+  1. Before you answer any question, follow the plan and solve
+  technique. Start by understanding the question, then plan your
+  approach to solve the question, and finally solve the question
+  by following the plan. Always give a brief explanation of your
+  answer to the user.
+
+  2. If the user wants to know the time taken by the model to reach
+  steady state, you should look at the steady_state_transition_time
+  column of the data for the model species. The highest value in
+  this column is the time taken by the model to reach steady state.
+
+  3. To get accurate results, trim the data to the relevant columns
+  before performing any calculations. This will help you avoid
+  errors in your calculations, and ignore irrelevant data.
+
+  4. Please use the units provided below to answer the questions.
+simulation_prompt: >
+  Following is the information about the data frame:
+  1. First column is the time column, and the rest of the columns
+  are the species names.
+
+  2. While the time column records the simulation time points, the
+  rest of the columns record the concentration of the species at
+  each time point.
+
+  3. Please use the units provided below to answer the questions.
+  

{aiagents4pharma-1.15.0 → aiagents4pharma-1.15.1}/aiagents4pharma.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.2
 Name: aiagents4pharma
-Version: 1.15.0
+Version: 1.15.1
 Summary: AI Agents for drug discovery, drug development, and other pharmaceutical R&D
 Classifier: Programming Language :: Python :: 3
 Classifier: License :: OSI Approved :: MIT License

{aiagents4pharma-1.15.0 → aiagents4pharma-1.15.1}/aiagents4pharma.egg-info/SOURCES.txt

@@ -16,6 +16,7 @@ aiagents4pharma/configs/talk2biomodels/agents/t2b_agent/__init__.py
 aiagents4pharma/configs/talk2biomodels/agents/t2b_agent/default.yaml
 aiagents4pharma/configs/talk2biomodels/tools/__init__.py
 aiagents4pharma/configs/talk2biomodels/tools/ask_question/__init__.py
+aiagents4pharma/configs/talk2biomodels/tools/ask_question/default.yaml
 aiagents4pharma/talk2biomodels/__init__.py
 aiagents4pharma/talk2biomodels/agents/__init__.py
 aiagents4pharma/talk2biomodels/agents/t2b_agent.py

{aiagents4pharma-1.15.0 → aiagents4pharma-1.15.1}/pyproject.toml

@@ -68,7 +68,9 @@ include = ["aiagents4pharma*"]
 [tool.setuptools.package-data]
 aiagents4pharma = [
             "configs/*",
-            "configs/talk2biomodels/agents/t2b_agent/*"]
+            "configs/talk2biomodels/agents/t2b_agent/*",
+            "configs/talk2biomodels/tools/ask_question/*",
+            "configs/talk2biomodels/tools/get_annotation/*"]
 
 [tool.pytest.ini_options]
 asyncio_default_fixture_loop_scope = "function"

aiagents4pharma-1.15.1/release_version.txt

@@ -0,0 +1 @@
+v1.15.1

aiagents4pharma-1.15.0/release_version.txt

@@ -1 +0,0 @@
-v1.15.0