accusleepy 0.4.3__tar.gz → 0.4.4__tar.gz

{accusleepy-0.4.3 → accusleepy-0.4.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.3
 Name: accusleepy
-Version: 0.4.3
+Version: 0.4.4
 Summary: Python implementation of AccuSleep
 License: GPL-3.0-only
 Author: Zeke Barger
@@ -43,6 +43,18 @@ The data and models associated with AccuSleep are available at https://osf.io/py
 
 Please contact zekebarger (at) gmail (dot) com with any questions or comments about the software.
 
+## What's new
+
+AccuSleePy offers the following improvements over the MATLAB version:
+
+- Up to 10 brain states can be configured through the user interface
+- Models can be trained through the user interface
+    - Model files contain useful metadata (brain state configuration,
+      epoch length, number of epochs)
+    - Models optimized for real-time scoring can be trained
+- Lists of recordings can be imported and exported for repeatable batch processing
+- Undo/redo functionality in the manual scoring interface
+
 ## Installation
 
 - (recommended) create a new virtual environment (using

{accusleepy-0.4.3 → accusleepy-0.4.4}/README.md

@@ -15,6 +15,18 @@ The data and models associated with AccuSleep are available at https://osf.io/py
 
 Please contact zekebarger (at) gmail (dot) com with any questions or comments about the software.
 
+## What's new
+
+AccuSleePy offers the following improvements over the MATLAB version:
+
+- Up to 10 brain states can be configured through the user interface
+- Models can be trained through the user interface
+    - Model files contain useful metadata (brain state configuration,
+      epoch length, number of epochs)
+    - Models optimized for real-time scoring can be trained
+- Lists of recordings can be imported and exported for repeatable batch processing
+- Undo/redo functionality in the manual scoring interface
+
 ## Installation
 
 - (recommended) create a new virtual environment (using

{accusleepy-0.4.3 → accusleepy-0.4.4}/accusleepy/gui/main.py

@@ -51,7 +51,7 @@ from accusleepy.signal_processing import (
 )
 
 # max number of messages to display
-MESSAGE_BOX_MAX_DEPTH = 50
+MESSAGE_BOX_MAX_DEPTH = 200
 LABEL_LENGTH_ERROR = "label file length does not match recording length"
 # relative path to config guide txt file
 CONFIG_GUIDE_FILE = os.path.normpath(r"text/config_guide.txt")
@@ -294,7 +294,7 @@ class AccuSleepWindow(QtWidgets.QMainWindow):
             error_message = self.check_single_file_inputs(recording_index)
             if error_message:
                 self.show_message(
-                    f"ERROR ({self.recordings[recording_index].name}): {error_message}"
+                    f"ERROR (recording {self.recordings[recording_index].name}): {error_message}"
                 )
                 return
 
@@ -431,7 +431,7 @@ class AccuSleepWindow(QtWidgets.QMainWindow):
                     f"error on recording {self.recordings[recording_index].name}"
                 )
                 self.show_message(
-                    f"ERROR ({self.recordings[recording_index].name}): {error_message}"
+                    f"ERROR (recording {self.recordings[recording_index].name}): {error_message}"
                 )
                 return
             if self.recordings[recording_index].calibration_file == "":
@@ -440,7 +440,7 @@ class AccuSleepWindow(QtWidgets.QMainWindow):
                 )
                 self.show_message(
                     (
-                        f"ERROR ({self.recordings[recording_index].name}): "
+                        f"ERROR (recording {self.recordings[recording_index].name}): "
                         "no calibration file selected"
                     )
                 )
@@ -752,7 +752,7 @@ class AccuSleepWindow(QtWidgets.QMainWindow):
         self.recordings[self.recording_index].calibration_file = filename
         self.ui.calibration_file_label.setText(filename)
 
-    def check_single_file_inputs(self, recording_index: int) -> str:
+    def check_single_file_inputs(self, recording_index: int) -> str | None:
         """Check that a recording's inputs appear valid
 
         This runs some basic tests for whether it will be possible to
@@ -772,6 +772,8 @@ class AccuSleepWindow(QtWidgets.QMainWindow):
             return "invalid epoch length or sampling rate"
         if self.recordings[self.recording_index].recording_file == "":
             return "no recording selected"
+        if not os.path.isfile(self.recordings[self.recording_index].recording_file):
+            return "recording file does not exist"
         if self.recordings[self.recording_index].label_file == "":
             return "no label file selected"
 

{accusleepy-0.4.3 → accusleepy-0.4.4}/accusleepy/gui/manual_scoring.py

@@ -446,8 +446,6 @@ class ManualScoringWindow(QtWidgets.QDialog):
         self.label_img = create_label_img(
             self.display_labels, self.label_display_options
         )
-        # update the plots
-        self.update_figures()
 
     def redo(self) -> None:
         """Redo the last change to brain state labels that was undone"""
@@ -716,7 +714,6 @@ class ManualScoringWindow(QtWidgets.QDialog):
         self.ui.upperfigure.canvas.axes[2].set_xlim(
             (self.upper_left_epoch, self.upper_right_epoch + 1)
         )
-        self.ui.upperfigure.canvas.draw()
 
     def zoom_x(self, direction: str) -> None:
         """Change upper figure x-axis zoom level
@@ -754,6 +751,7 @@ class ManualScoringWindow(QtWidgets.QDialog):
             self.upper_left_epoch = 0
             self.upper_right_epoch = self.n_epochs - 1
         self.adjust_upper_figure_x_limits()
+        self.ui.upperfigure.canvas.draw()
 
     def modify_current_epoch_label(self, digit: int) -> None:
         """Change the current epoch's brain state label
@@ -974,8 +972,6 @@ class ManualScoringWindow(QtWidgets.QDialog):
         else:
             self.upper_left_epoch = self.epoch - upper_epoch_padding
             self.upper_right_epoch = self.epoch + upper_epoch_padding
-        # update upper marker
-        self.update_upper_marker()
         self.adjust_upper_figure_x_limits()
 
         # update lower figure x-axis range
@@ -990,7 +986,7 @@ class ManualScoringWindow(QtWidgets.QDialog):
             self.lower_left_epoch = self.epoch - lower_epoch_padding
             self.lower_right_epoch = self.epoch + lower_epoch_padding
 
-        self.update_lower_figure()
+        self.update_figures()
 
 
 def convert_labels(labels: np.array, style: str) -> np.array:

{accusleepy-0.4.3 → accusleepy-0.4.4}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "accusleepy"
-version = "0.4.3"
+version = "0.4.4"
 description = "Python implementation of AccuSleep"
 authors = [
     {name = "Zeke Barger",email = "zekebarger@gmail.com"}