access-profiling 0.1__tar.gz → 0.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (58) hide show
  1. {access_profiling-0.1 → access_profiling-0.2}/.github/workflows/cd.yml +7 -7
  2. {access_profiling-0.1 → access_profiling-0.2}/.github/workflows/ci.yml +10 -9
  3. {access_profiling-0.1/src/access_profiling.egg-info → access_profiling-0.2}/PKG-INFO +4 -4
  4. {access_profiling-0.1 → access_profiling-0.2}/pyproject.toml +3 -3
  5. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/__init__.py +10 -1
  6. access_profiling-0.2/src/access/profiling/access_models.py +884 -0
  7. access_profiling-0.2/src/access/profiling/cylc_manager.py +390 -0
  8. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/experiment.py +74 -19
  9. access_profiling-0.2/src/access/profiling/manager.py +1049 -0
  10. access_profiling-0.2/src/access/profiling/payu_manager.py +761 -0
  11. access_profiling-0.2/src/access/profiling/scaling.py +232 -0
  12. {access_profiling-0.1 → access_profiling-0.2/src/access_profiling.egg-info}/PKG-INFO +4 -4
  13. {access_profiling-0.1 → access_profiling-0.2}/src/access_profiling.egg-info/requires.txt +3 -3
  14. access_profiling-0.2/tests/test_access_models.py +1145 -0
  15. {access_profiling-0.1 → access_profiling-0.2}/tests/test_cylc_manager.py +187 -0
  16. {access_profiling-0.1 → access_profiling-0.2}/tests/test_experiment.py +35 -0
  17. {access_profiling-0.1 → access_profiling-0.2}/tests/test_manager.py +523 -3
  18. access_profiling-0.2/tests/test_payu_manager.py +1373 -0
  19. access_profiling-0.2/tests/test_scaling.py +482 -0
  20. access_profiling-0.1/src/access/profiling/access_models.py +0 -84
  21. access_profiling-0.1/src/access/profiling/cylc_manager.py +0 -209
  22. access_profiling-0.1/src/access/profiling/manager.py +0 -559
  23. access_profiling-0.1/src/access/profiling/payu_manager.py +0 -338
  24. access_profiling-0.1/src/access/profiling/scaling.py +0 -128
  25. access_profiling-0.1/tests/test_access_models.py +0 -81
  26. access_profiling-0.1/tests/test_payu_manager.py +0 -491
  27. access_profiling-0.1/tests/test_scaling.py +0 -98
  28. {access_profiling-0.1 → access_profiling-0.2}/.gitignore +0 -0
  29. {access_profiling-0.1 → access_profiling-0.2}/.pre-commit-config.yaml +0 -0
  30. {access_profiling-0.1 → access_profiling-0.2}/COPYRIGHT.txt +0 -0
  31. {access_profiling-0.1 → access_profiling-0.2}/LICENSE +0 -0
  32. {access_profiling-0.1 → access_profiling-0.2}/README.md +0 -0
  33. {access_profiling-0.1 → access_profiling-0.2}/conda/environment.yml +0 -0
  34. {access_profiling-0.1 → access_profiling-0.2}/conda/meta.yaml +0 -0
  35. {access_profiling-0.1 → access_profiling-0.2}/setup.cfg +0 -0
  36. {access_profiling-0.1 → access_profiling-0.2}/setup.py +0 -0
  37. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/cice5_parser.py +0 -0
  38. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/cylc_parser.py +0 -0
  39. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/esmf_parser.py +0 -0
  40. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/fms_parser.py +0 -0
  41. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/metrics.py +0 -0
  42. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/parser.py +0 -0
  43. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/payujson_parser.py +0 -0
  44. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/plotting_utils.py +0 -0
  45. {access_profiling-0.1 → access_profiling-0.2}/src/access/profiling/um_parser.py +0 -0
  46. {access_profiling-0.1 → access_profiling-0.2}/src/access_profiling.egg-info/SOURCES.txt +0 -0
  47. {access_profiling-0.1 → access_profiling-0.2}/src/access_profiling.egg-info/dependency_links.txt +0 -0
  48. {access_profiling-0.1 → access_profiling-0.2}/src/access_profiling.egg-info/top_level.txt +0 -0
  49. {access_profiling-0.1 → access_profiling-0.2}/tests/test_cice5_profiling.py +0 -0
  50. {access_profiling-0.1 → access_profiling-0.2}/tests/test_cylc_dbreader.py +0 -0
  51. {access_profiling-0.1 → access_profiling-0.2}/tests/test_cylc_parser.py +0 -0
  52. {access_profiling-0.1 → access_profiling-0.2}/tests/test_esmf_summary_parser.py +0 -0
  53. {access_profiling-0.1 → access_profiling-0.2}/tests/test_fms_parser.py +0 -0
  54. {access_profiling-0.1 → access_profiling-0.2}/tests/test_metrics.py +0 -0
  55. {access_profiling-0.1 → access_profiling-0.2}/tests/test_parser.py +0 -0
  56. {access_profiling-0.1 → access_profiling-0.2}/tests/test_payujson_parser.py +0 -0
  57. {access_profiling-0.1 → access_profiling-0.2}/tests/test_plotting_utils.py +0 -0
  58. {access_profiling-0.1 → access_profiling-0.2}/tests/test_um_parser.py +0 -0
@@ -14,16 +14,16 @@ jobs:
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  if: github.repository == 'ACCESS-NRI/access-profiling' # exclude forks
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  runs-on: ubuntu-latest
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  steps:
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- - uses: actions/checkout@v4
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+ - uses: actions/checkout@v7
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- - uses: actions/setup-python@v5
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+ - uses: actions/setup-python@v7
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  with:
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  python-version: ${{ env.PY_VERSION }}
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  - run: |
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  python3 -m pip install --upgrade build && python3 -m build
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- - uses: actions/upload-artifact@v4
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+ - uses: actions/upload-artifact@v7
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  with:
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  name: release
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  path: dist
@@ -37,13 +37,13 @@ jobs:
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  # IMPORTANT: this permission is mandatory for trusted publishing
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  id-token: write
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  steps:
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- - uses: actions/download-artifact@v4
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+ - uses: actions/download-artifact@v8
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  with:
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  name: release
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  path: dist
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  - name: Publish package distributions to PyPI
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- uses: pypa/gh-action-pypi-publish@76f52bc884231f62b9a034ebfe128415bbaabdfc # v1.12.4
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+ uses: pypa/gh-action-pypi-publish@dc37677b2e1c63e2034f94d8a5b11f265b73ba33 # v1.14.2
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  conda:
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  name: Build with conda and upload
@@ -51,10 +51,10 @@ jobs:
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  runs-on: ubuntu-latest
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  steps:
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  - name: Checkout source
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- uses: actions/checkout@v4
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+ uses: actions/checkout@v7
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  - name: Setup conda environment
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- uses: conda-incubator/setup-miniconda@835234971496cad1653abb28a638a281cf32541f # v3.2.0
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+ uses: conda-incubator/setup-miniconda@8ee1f361103df19b6f8c8655fd3967a8ecb162d5 # v4.0.1
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  with:
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  miniconda-version: "latest"
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  python-version: ${{ env.PY_VERSION }}
@@ -20,8 +20,8 @@ jobs:
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  formatting:
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  runs-on: ubuntu-latest
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  steps:
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- - uses: actions/checkout@v3
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- - uses: actions/setup-python@v3
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+ - uses: actions/checkout@v7
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+ - uses: actions/setup-python@v7
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  with:
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  python-version: ${{ env.PY_VERSION_BUILD }}
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  - uses: pre-commit/action@2c7b3805fd2a0fd8c1884dcaebf91fc102a13ecd # v3.0.1
@@ -30,9 +30,9 @@ jobs:
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  name: PyPA build
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  runs-on: ubuntu-latest
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  steps:
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- - uses: actions/checkout@v4
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+ - uses: actions/checkout@v7
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- - uses: actions/setup-python@v5
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+ - uses: actions/setup-python@v7
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  with:
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  python-version: ${{ env.PY_VERSION_BUILD }}
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  cache: 'pip' # caching pip dependencies
@@ -44,10 +44,10 @@ jobs:
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  name: Conda Build
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  runs-on: ubuntu-latest
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  steps:
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- - uses: actions/checkout@v4
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+ - uses: actions/checkout@v7
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  - name: Setup conda environment
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- uses: conda-incubator/setup-miniconda@835234971496cad1653abb28a638a281cf32541f # v3.2.0
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+ uses: conda-incubator/setup-miniconda@8ee1f361103df19b6f8c8655fd3967a8ecb162d5 # v4.0.1
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  with:
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  miniconda-version: "latest"
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  python-version: ${{ env.PY_VERSION_BUILD }}
@@ -71,19 +71,20 @@ jobs:
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  python-version: ['3.11', '3.12', '3.13']
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  steps:
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- - uses: actions/checkout@v3
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+ - uses: actions/checkout@v7
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  - name: Set up Python ${{ matrix.python-version }}
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- uses: actions/setup-python@v3
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+ uses: actions/setup-python@v7
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  with:
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  python-version: ${{ matrix.python-version }}
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  - name: Install dependencies
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  run: |
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  python -m pip install --upgrade pip
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+ python -m pip install --uploaded-prior-to=P0D access-config-utils
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  pip install '.[devel,test]'
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  - name: Test with pytest
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  run: |
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  python -m pytest
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  - name: Upload coverage reports to Codecov with GitHub Action
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- uses: codecov/codecov-action@v5
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+ uses: codecov/codecov-action@v7
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  with:
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  token: ${{ secrets.CODECOV_TOKEN }}
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: access-profiling
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- Version: 0.1
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+ Version: 0.2
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  Summary: Tools and utilities to profile the ACCESS climate models.
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  Author-email: Micael Oliveira <micael.oliveira@anu.edu.au>, Manodeep Sinha <manodeep.sinha@anu.edu.au>, Edward Yang <edward.yang@anu.edu.au>
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  Keywords: profiling,access
@@ -15,9 +15,9 @@ Requires-Dist: xarray
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  Requires-Dist: pint
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  Requires-Dist: pint-xarray
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  Requires-Dist: matplotlib
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- Requires-Dist: access-config-utils
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- Requires-Dist: experiment-runner
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- Requires-Dist: experiment-generator
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+ Requires-Dist: access-config-utils>=0.4
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+ Requires-Dist: experiment-generator>=0.10.2
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+ Requires-Dist: experiment-runner>=0.3.2
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  Requires-Dist: payu
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  Provides-Extra: devel
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  Requires-Dist: pre-commit; extra == "devel"
@@ -21,9 +21,9 @@ dependencies = [
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  "pint",
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  "pint-xarray",
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  "matplotlib",
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- "access-config-utils",
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- "experiment-runner",
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- "experiment-generator",
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+ "access-config-utils>=0.4",
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+ "experiment-generator>=0.10.2",
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+ "experiment-runner>=0.3.2",
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  "payu", # Extra dependency of experiment-runner, not handled correctly in conda
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  ]
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@@ -9,7 +9,13 @@ __version__ = "unknown"
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  with suppress(PackageNotFoundError):
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  __version__ = version("access-profiling")
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- from access.profiling.access_models import ESM16Profiling, RAM3Profiling
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+ from access.profiling.access_models import (
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+ AM3Profiling,
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+ ESM16Profiling,
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+ OM3Configuration,
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+ OM3Profiling,
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+ RAM3Profiling,
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+ )
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  from access.profiling.cice5_parser import CICE5ProfilingParser
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  from access.profiling.cylc_parser import CylcDBReader, CylcProfilingParser
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  from access.profiling.esmf_parser import ESMFSummaryProfilingParser
@@ -26,7 +32,10 @@ __all__ = [
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  "PayuJSONProfilingParser",
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  "ESMFSummaryProfilingParser",
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  "ESM16Profiling",
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+ "OM3Configuration",
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+ "OM3Profiling",
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  "CylcProfilingParser",
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  "CylcDBReader",
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  "RAM3Profiling",
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+ "AM3Profiling",
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  ]