UQPyL 2.0.3__tar.gz → 2.0.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (108) hide show
  1. {UQPyL-2.0.3 → UQPyL-2.0.4}/PKG-INFO +1 -1
  2. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/__init__.py +1 -1
  3. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/asmo.py +14 -11
  4. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL.egg-info/PKG-INFO +1 -1
  5. {UQPyL-2.0.3 → UQPyL-2.0.4}/pyproject.toml +1 -1
  6. {UQPyL-2.0.3 → UQPyL-2.0.4}/setup.py +1 -1
  7. {UQPyL-2.0.3 → UQPyL-2.0.4}/LICENSE.md +0 -0
  8. {UQPyL-2.0.3 → UQPyL-2.0.4}/README.md +0 -0
  9. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/__init__.py +0 -0
  10. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/_lhs.py +0 -0
  11. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/fast_sequence.py +0 -0
  12. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/full_fact.py +0 -0
  13. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/lhs.py +0 -0
  14. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/morris_sequence.py +0 -0
  15. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/random.py +0 -0
  16. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/sampler_ABC.py +0 -0
  17. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/DoE/sobol_sequence.py +0 -0
  18. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/__init__.py +0 -0
  19. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/_binary_ga.py +0 -0
  20. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/adam.py +0 -0
  21. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/boxmin.py +0 -0
  22. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/ga.py +0 -0
  23. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/mo_asmo.py +0 -0
  24. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/moea_d.py +0 -0
  25. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/nsga_ii.py +0 -0
  26. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/pso.py +0 -0
  27. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/sce_ua.py +0 -0
  28. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/utility_functions/_NDsort.py +0 -0
  29. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/utility_functions/__init__.py +0 -0
  30. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/optimization/utility_functions/_uniformPoint.py +0 -0
  31. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/__init__.py +0 -0
  32. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/multi_DTLZ.py +0 -0
  33. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/multi_ZDT.py +0 -0
  34. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/pratical_problem.py +0 -0
  35. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/problem_ABC.py +0 -0
  36. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/single_Benchmarks.py +0 -0
  37. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/utility_functions/_NDsort.py +0 -0
  38. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/utility_functions/__init__.py +0 -0
  39. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/problems/utility_functions/_uniformPoint.py +0 -0
  40. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/__init__.py +0 -0
  41. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/delta_test.py +0 -0
  42. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/fast.py +0 -0
  43. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/mars_sa.py +0 -0
  44. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/morris.py +0 -0
  45. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/rbd_fast.py +0 -0
  46. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/rsa.py +0 -0
  47. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/sa_ABC.py +0 -0
  48. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/sensibility/sobol.py +0 -0
  49. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/BaggingEnsemble.py +0 -0
  50. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/BootstrapEnsemble.py +0 -0
  51. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/__init__.py +0 -0
  52. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/fully_connect_neural_network.py +0 -0
  53. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gaussian_process.py +0 -0
  54. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/__init__.py +0 -0
  55. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/base_kernel.py +0 -0
  56. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/c_kernel.py +0 -0
  57. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/dot_kernel.py +0 -0
  58. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/matern_kernel.py +0 -0
  59. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/rbf_kernel.py +0 -0
  60. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/gp_kernels/rq_kernel.py +0 -0
  61. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/krg_kernels/__init__.py +0 -0
  62. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/krg_kernels/base_kernel.py +0 -0
  63. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/krg_kernels/cubic_kernel.py +0 -0
  64. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/krg_kernels/exp_kernel.py +0 -0
  65. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/krg_kernels/guass_kernel.py +0 -0
  66. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/kriging.py +0 -0
  67. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/lasso_/__init__.py +0 -0
  68. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/lasso_/lasso_fast.c +0 -0
  69. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/linear_regression.py +0 -0
  70. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars.py +0 -0
  71. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/__init__.py +0 -0
  72. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_basis.c +0 -0
  73. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_forward.c +0 -0
  74. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_knot_search.c +0 -0
  75. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_pruning.c +0 -0
  76. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_qr.c +0 -0
  77. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_record.c +0 -0
  78. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_types.c +0 -0
  79. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/_util.c +0 -0
  80. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mars_/pyearth/__init__.py +0 -0
  81. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mlp_utility/__init__.py +0 -0
  82. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mlp_utility/_activation_funcs.py +0 -0
  83. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/mlp_utility/base.py +0 -0
  84. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/polynomial_regression.py +0 -0
  85. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/radial_basis_function.py +0 -0
  86. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/__init__.py +0 -0
  87. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/base_kernel.py +0 -0
  88. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/cubic_kernel.py +0 -0
  89. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/gaussian_kernel.py +0 -0
  90. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/linear_kernel.py +0 -0
  91. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/multiquadric_kernel.py +0 -0
  92. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/rbf_kernels/thin_plate_spline_kernel.py +0 -0
  93. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/support_vector_machine.py +0 -0
  94. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/surrogate_ABC.py +0 -0
  95. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/svr_/__init__.py +0 -0
  96. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/svr_/libsvm_interface.cpp +0 -0
  97. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/surrogates/svr_/svm.cpp +0 -0
  98. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/__init__.py +0 -0
  99. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/grid_search.py +0 -0
  100. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/metrics.py +0 -0
  101. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/model_selections.py +0 -0
  102. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/polynomial_features.py +0 -0
  103. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL/utility/scalers.py +0 -0
  104. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL.egg-info/SOURCES.txt +0 -0
  105. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL.egg-info/dependency_links.txt +0 -0
  106. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL.egg-info/requires.txt +0 -0
  107. {UQPyL-2.0.3 → UQPyL-2.0.4}/UQPyL.egg-info/top_level.txt +0 -0
  108. {UQPyL-2.0.3 → UQPyL-2.0.4}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: UQPyL
3
- Version: 2.0.3
3
+ Version: 2.0.4
4
4
  Summary: A python package for parameter uncertainty quantification and optimization
5
5
  Author: wmtSky
6
6
  Author-email: wmtSky <wmtsky@hhu.edu.cn>
@@ -1,6 +1,6 @@
1
1
  from . import problems, surrogates, optimization, sensibility, DoE, utility
2
2
 
3
- __version__ = "2.0.1"
3
+ __version__ = "2.0.4"
4
4
  __author__ = "wmtSky"
5
5
 
6
6
  __all__=[
@@ -3,6 +3,7 @@ from tqdm import tqdm
3
3
  from typing import Optional
4
4
 
5
5
  from .sce_ua import SCE_UA
6
+ from .pso import PSO
6
7
  from ..DoE import LHS
7
8
  from ..problems import Problem
8
9
  from ..surrogates import Surrogate
@@ -46,11 +47,11 @@ class ASMO():
46
47
  #construct optimization problem to combine surrogate and algorithm
47
48
  self.subProblem=Problem(self.surrogate.predict, self.n_input, 1, self.ub, self.lb)
48
49
 
49
- def run(self,maxFE=1000, Tolerate=0.001, maxTolerateTime=50, oneStep=False):
50
+ def run(self, oneStep=False):
50
51
  '''
51
52
  main procedure
52
53
  '''
53
- show_process=tqdm(total=maxFE)
54
+ show_process=tqdm(total=self.maxFE)
54
55
  FE=0
55
56
  TT=0
56
57
  n_input=self.n_input
@@ -65,8 +66,8 @@ class ASMO():
65
66
  XPop=self.x_init
66
67
  YPop=self.y_init
67
68
 
68
- fe=YPop.shape[0]
69
- show_process.update(fe)
69
+ FE=YPop.shape[0]
70
+ show_process.update(FE)
70
71
  ###
71
72
  idx=np.argsort(YPop, axis=0)
72
73
  BestY=YPop[idx[0,0],0]
@@ -78,11 +79,11 @@ class ASMO():
78
79
  # history_BestY.append(BestY)
79
80
 
80
81
  if (oneStep==False):
81
- while fe<self.maxFE and TT<self.maxTolerateTime:
82
+ while FE<self.maxFE and TT<self.maxTolerateTime:
82
83
  show_process.update(1)
83
84
  # Build surrogate model
84
85
  self.surrogate.fit(XPop, YPop)
85
- res=SCE_UA(self.subProblem).run()
86
+ res=PSO(self.subProblem).run()
86
87
  BestX_SM=res['best_dec']
87
88
 
88
89
  TempY=self.evaluate(BestX_SM)
@@ -91,8 +92,10 @@ class ASMO():
91
92
  YPop=np.vstack((YPop,TempY))
92
93
 
93
94
  if TempY[0,0]<BestY:
94
- BestY=np.copy(TempY)
95
+ BestY=np.copy(TempY[0,0])
95
96
  BestX=np.copy(BestX_SM)
97
+ history_best_decs[FE]=BestX
98
+ history_best_objs[FE]=BestY
96
99
  else:
97
100
  self.surrogate.fit(XPop, YPop)
98
101
  res=SCE_UA(self.subProblem).run()
@@ -100,17 +103,17 @@ class ASMO():
100
103
 
101
104
  TempY=self.evaluate(BestX_SM)
102
105
 
103
- fe+=1
106
+ FE+=1
104
107
  XPop=np.vstack((XPop,BestX_SM))
105
108
  YPop=np.vstack((YPop,TempY))
106
109
 
107
110
  if TempY[0,0]<BestY:
108
111
  BestY=np.copy(TempY)
109
112
  BestX=np.copy(BestX_SM)
110
- history_best_decs[fe]=BestX
111
- history_best_objs[fe]=BestY
113
+ history_best_decs[FE]=BestX
114
+ history_best_objs[FE]=BestY
112
115
 
113
- Result={'best_dec':BestX, 'best_obj':BestY, 'history_best_decs': history_best_decs, 'history_best_objs':history_best_objs ,'FE':fe}
116
+ Result={'best_dec':BestX, 'best_obj':BestY, 'history_best_decs': history_best_decs, 'history_best_objs':history_best_objs ,'FE':FE}
114
117
 
115
118
  return Result
116
119
 
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: UQPyL
3
- Version: 2.0.3
3
+ Version: 2.0.4
4
4
  Summary: A python package for parameter uncertainty quantification and optimization
5
5
  Author: wmtSky
6
6
  Author-email: wmtSky <wmtsky@hhu.edu.cn>
@@ -12,7 +12,7 @@ build-backend = "setuptools.build_meta"
12
12
 
13
13
  [project]
14
14
  name = "UQPyL"
15
- version = "2.0.3"
15
+ version = "2.0.4"
16
16
  authors = [
17
17
  {name = "wmtSky", email = "wmtsky@hhu.edu.cn"}
18
18
  ]
@@ -41,7 +41,7 @@ extensions=cythonize(cython_extensions, compiler_directives={'cdivision': True,
41
41
  setup(
42
42
  name="UQPyL",
43
43
  author="wmtSky",
44
- version="2.0.3",
44
+ version="2.0.4",
45
45
  author_email="wmtsky@hhu.edu.cn",
46
46
  # ... 其他常规setup参数 ...
47
47
  ext_modules=extensions, # 如果有自定义的编译行为
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