SURE-tools 4.0.3__tar.gz → 4.0.5__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {sure_tools-4.0.3 → sure_tools-4.0.5}/PKG-INFO +1 -1
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/SURE_vae.py +3 -3
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE_tools.egg-info/PKG-INFO +1 -1
- {sure_tools-4.0.3 → sure_tools-4.0.5}/setup.py +1 -1
- {sure_tools-4.0.3 → sure_tools-4.0.5}/LICENSE +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/README.md +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/SURE.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/SUREMO.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/SURE_nsf.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/SURE_vanilla.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/__init__.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/atac/__init__.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/atac/utils.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/dist/__init__.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/dist/negbinomial.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/graph/__init__.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/graph/graph_utils.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/utils/__init__.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/utils/custom_mlp.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/utils/label.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/utils/queue.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE/utils/utils.py +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE_tools.egg-info/SOURCES.txt +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE_tools.egg-info/dependency_links.txt +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE_tools.egg-info/requires.txt +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/SURE_tools.egg-info/top_level.txt +0 -0
- {sure_tools-4.0.3 → sure_tools-4.0.5}/setup.cfg +0 -0
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@@ -297,7 +297,7 @@ class SUREVAE(nn.Module):
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)
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self.decoder_log_mu = MLP(
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[self.latent_dim] + self.decoder_hidden_layers + [self.input_dim],
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[self.latent_dim+self.latent_dim+self.latent_dim] + self.decoder_hidden_layers + [self.input_dim],
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activation=activate_fct,
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output_activation=None,
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post_layer_fct=post_layer_fct,
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@@ -444,7 +444,7 @@ class SUREVAE(nn.Module):
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else:
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zfs = torch.zeros_like(zs)
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log_mu = self.decoder_log_mu(zs+zcs
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log_mu = self.decoder_log_mu([zs+zcs,zps,zfs])
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if self.loss_func in ['bernoulli']:
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log_theta = log_mu
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elif self.loss_func in ['negbinomial']:
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@@ -707,7 +707,7 @@ class SUREVAE(nn.Module):
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zfs = torch.zeros_like(z_basal)
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log_mu = self.decoder_log_mu(z_basal+zcs
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log_mu = self.decoder_log_mu([z_basal+zcs,zps,zfs])
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if self.loss_func == 'bernoulli':
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counts = dist.Bernoulli(logits=log_mu).to_event(1).mean
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else:
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