SURE-tools 2.2.18__tar.gz → 2.2.23__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (30) hide show
  1. {sure_tools-2.2.18 → sure_tools-2.2.23}/PKG-INFO +1 -1
  2. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/DensityFlow.py +2 -2
  3. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/PKG-INFO +1 -1
  4. {sure_tools-2.2.18 → sure_tools-2.2.23}/setup.py +1 -1
  5. {sure_tools-2.2.18 → sure_tools-2.2.23}/LICENSE +0 -0
  6. {sure_tools-2.2.18 → sure_tools-2.2.23}/README.md +0 -0
  7. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/SURE.py +0 -0
  8. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/__init__.py +0 -0
  9. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/assembly/__init__.py +0 -0
  10. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/assembly/assembly.py +0 -0
  11. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/assembly/atlas.py +0 -0
  12. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/atac/__init__.py +0 -0
  13. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/atac/utils.py +0 -0
  14. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/codebook/__init__.py +0 -0
  15. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/codebook/codebook.py +0 -0
  16. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/flow/__init__.py +0 -0
  17. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/flow/flow_stats.py +0 -0
  18. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/flow/plot_quiver.py +0 -0
  19. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/perturb/__init__.py +0 -0
  20. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/perturb/perturb.py +0 -0
  21. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/utils/__init__.py +0 -0
  22. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/utils/custom_mlp.py +0 -0
  23. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/utils/queue.py +0 -0
  24. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/utils/utils.py +0 -0
  25. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/SOURCES.txt +0 -0
  26. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/dependency_links.txt +0 -0
  27. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/entry_points.txt +0 -0
  28. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/requires.txt +0 -0
  29. {sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/top_level.txt +0 -0
  30. {sure_tools-2.2.18 → sure_tools-2.2.23}/setup.cfg +0 -0
{sure_tools-2.2.18 → sure_tools-2.2.23}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: SURE-tools
3
- Version: 2.2.18
3
+ Version: 2.2.23
4
4
  Summary: Succinct Representation of Single Cells
5
5
  Home-page: https://github.com/ZengFLab/SURE
6
6
  Author: Feng Zeng
{sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/DensityFlow.py RENAMED
@@ -706,13 +706,13 @@ class DensityFlow(nn.Module):
706
706
  # zus = self.cell_factor_effect[i](us[:,i].reshape(-1,1))
707
707
  #else:
708
708
  # zus = self.cell_factor_effect[i]([zns,us[:,i].reshape(-1,1)])
709
- zus = self._cell_response(zns, i, us)
709
+ zus = self._cell_response(zns, i, us[:,i].reshape(-1,1))
710
710
  else:
711
711
  #if self.turn_off_cell_specific:
712
712
  # zus = zus + self.cell_factor_effect[i](us[:,i].reshape(-1,1))
713
713
  #else:
714
714
  # zus = zus + self.cell_factor_effect[i]([zns,us[:,i].reshape(-1,1)])
715
- zus = zus + self._cell_response(zns, i, us)
715
+ zus = zus + self._cell_response(zns, i, us[:,i].reshape(-1,1))
716
716
  return zus
717
717
 
718
718
  def _get_codebook_identity(self):
{sure_tools-2.2.18 → sure_tools-2.2.23}/SURE_tools.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: SURE-tools
3
- Version: 2.2.18
3
+ Version: 2.2.23
4
4
  Summary: Succinct Representation of Single Cells
5
5
  Home-page: https://github.com/ZengFLab/SURE
6
6
  Author: Feng Zeng
{sure_tools-2.2.18 → sure_tools-2.2.23}/setup.py RENAMED
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
5
5
 
6
6
  setup(
7
7
  name='SURE-tools',
8
- version='2.2.18',
8
+ version='2.2.23',
9
9
  description='Succinct Representation of Single Cells',
10
10
  long_description=long_description,
11
11
  long_description_content_type="text/markdown",
{sure_tools-2.2.18 → sure_tools-2.2.23}/LICENSE RENAMED
File without changes
{sure_tools-2.2.18 → sure_tools-2.2.23}/README.md RENAMED
File without changes
{sure_tools-2.2.18 → sure_tools-2.2.23}/SURE/SURE.py RENAMED
File without changes
{sure_tools-2.2.18 → sure_tools-2.2.23}/setup.cfg RENAMED
File without changes