SURE-tools 2.0.8__tar.gz → 2.0.9__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (26) hide show
  1. {sure_tools-2.0.8 → sure_tools-2.0.9}/PKG-INFO +1 -1
  2. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/SURE.py +2 -2
  3. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/PKG-INFO +1 -1
  4. {sure_tools-2.0.8 → sure_tools-2.0.9}/setup.py +1 -1
  5. {sure_tools-2.0.8 → sure_tools-2.0.9}/LICENSE +0 -0
  6. {sure_tools-2.0.8 → sure_tools-2.0.9}/README.md +0 -0
  7. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/__init__.py +0 -0
  8. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/assembly/__init__.py +0 -0
  9. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/assembly/assembly.py +0 -0
  10. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/assembly/atlas.py +0 -0
  11. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/atac/__init__.py +0 -0
  12. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/atac/utils.py +0 -0
  13. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/codebook/__init__.py +0 -0
  14. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/codebook/codebook.py +0 -0
  15. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/flow/__init__.py +0 -0
  16. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/flow/plot_quiver.py +0 -0
  17. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/utils/__init__.py +0 -0
  18. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/utils/custom_mlp.py +0 -0
  19. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/utils/queue.py +0 -0
  20. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/utils/utils.py +0 -0
  21. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/SOURCES.txt +0 -0
  22. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/dependency_links.txt +0 -0
  23. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/entry_points.txt +0 -0
  24. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/requires.txt +0 -0
  25. {sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/top_level.txt +0 -0
  26. {sure_tools-2.0.8 → sure_tools-2.0.9}/setup.cfg +0 -0
{sure_tools-2.0.8 → sure_tools-2.0.9}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 2.0.8
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+ Version: 2.0.9
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/SURE.py RENAMED
@@ -816,7 +816,7 @@ class SURE(nn.Module):
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  def _cell_move(self, xs, factor_idx, perturb):
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  zns,_ = self.encoder_zn(xs)
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  if type(factor_idx) == str:
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- factor_idx = np.where(self.cell_factor_names==factor_idx)
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+ factor_idx = int(np.where(self.cell_factor_names==factor_idx)[0])
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  if perturb.ndim==2:
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  ms = self.cell_factor_effect[factor_idx]([zns, perturb])
@@ -855,7 +855,7 @@ class SURE(nn.Module):
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  ps = convert_to_tensor(perturb, device=self.get_device())
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  if type(factor_idx) == str:
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- factor_idx = np.where(self.cell_factor_names==factor_idx)
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+ factor_idx = int(np.where(self.cell_factor_names==factor_idx)[0])
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  ms = self.cell_factor_effect[factor_idx]([zs,ps])
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  return tensor_to_numpy(ms)
{sure_tools-2.0.8 → sure_tools-2.0.9}/SURE_tools.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 2.0.8
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+ Version: 2.0.9
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-2.0.8 → sure_tools-2.0.9}/setup.py RENAMED
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
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  setup(
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  name='SURE-tools',
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- version='2.0.8',
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+ version='2.0.9',
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  description='Succinct Representation of Single Cells',
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  long_description=long_description,
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  long_description_content_type="text/markdown",
{sure_tools-2.0.8 → sure_tools-2.0.9}/LICENSE RENAMED
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{sure_tools-2.0.8 → sure_tools-2.0.9}/README.md RENAMED
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{sure_tools-2.0.8 → sure_tools-2.0.9}/SURE/__init__.py RENAMED
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{sure_tools-2.0.8 → sure_tools-2.0.9}/setup.cfg RENAMED
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