SURE-tools 1.0.8__tar.gz → 1.0.10__tar.gz

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Files changed (26) hide show
  1. {sure_tools-1.0.8 → sure_tools-1.0.10}/PKG-INFO +1 -1
  2. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/SURE.py +3 -0
  3. sure_tools-1.0.10/SURE/SURE2.py +1236 -0
  4. sure_tools-1.0.10/SURE/__init__.py +10 -0
  5. sure_tools-1.0.10/SURE/atac/__init__.py +1 -0
  6. sure_tools-1.0.10/SURE/atac/utils.py +151 -0
  7. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/PKG-INFO +1 -1
  8. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/SOURCES.txt +3 -0
  9. {sure_tools-1.0.8 → sure_tools-1.0.10}/setup.py +1 -1
  10. sure_tools-1.0.8/SURE/__init__.py +0 -7
  11. {sure_tools-1.0.8 → sure_tools-1.0.10}/LICENSE +0 -0
  12. {sure_tools-1.0.8 → sure_tools-1.0.10}/README.md +0 -0
  13. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/assembly/__init__.py +0 -0
  14. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/assembly/assembly.py +0 -0
  15. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/assembly/atlas.py +0 -0
  16. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/codebook/__init__.py +0 -0
  17. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/codebook/codebook.py +0 -0
  18. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/utils/__init__.py +0 -0
  19. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/utils/custom_mlp.py +0 -0
  20. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/utils/queue.py +0 -0
  21. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/utils/utils.py +0 -0
  22. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/dependency_links.txt +0 -0
  23. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/entry_points.txt +0 -0
  24. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/requires.txt +0 -0
  25. {sure_tools-1.0.8 → sure_tools-1.0.10}/SURE_tools.egg-info/top_level.txt +0 -0
  26. {sure_tools-1.0.8 → sure_tools-1.0.10}/setup.cfg +0 -0
{sure_tools-1.0.8 → sure_tools-1.0.10}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 1.0.8
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+ Version: 1.0.10
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-1.0.8 → sure_tools-1.0.10}/SURE/SURE.py RENAMED
@@ -22,6 +22,9 @@ import datatable as dt
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  from tqdm import tqdm
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  from scipy import sparse
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+ import scanpy as sc
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+ from .atac import binarize
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+
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  from typing import Literal
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  import warnings