SURE-tools 1.0.4__tar.gz → 1.0.5__tar.gz

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Files changed (22) hide show
  1. {sure_tools-1.0.4 → sure_tools-1.0.5}/PKG-INFO +1 -1
  2. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/SURE.py +4 -4
  3. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/PKG-INFO +1 -1
  4. {sure_tools-1.0.4 → sure_tools-1.0.5}/setup.py +1 -1
  5. {sure_tools-1.0.4 → sure_tools-1.0.5}/LICENSE +0 -0
  6. {sure_tools-1.0.4 → sure_tools-1.0.5}/README.md +0 -0
  7. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/__init__.py +0 -0
  8. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/assembly/__init__.py +0 -0
  9. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/assembly/assembly.py +0 -0
  10. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/assembly/atlas.py +0 -0
  11. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/codebook/__init__.py +0 -0
  12. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/codebook/codebook.py +0 -0
  13. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/utils/__init__.py +0 -0
  14. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/utils/custom_mlp.py +0 -0
  15. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/utils/queue.py +0 -0
  16. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/utils/utils.py +0 -0
  17. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/SOURCES.txt +0 -0
  18. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/dependency_links.txt +0 -0
  19. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/entry_points.txt +0 -0
  20. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/requires.txt +0 -0
  21. {sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/top_level.txt +0 -0
  22. {sure_tools-1.0.4 → sure_tools-1.0.5}/setup.cfg +0 -0
{sure_tools-1.0.4 → sure_tools-1.0.5}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 1.0.4
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+ Version: 1.0.5
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/SURE.py RENAMED
@@ -369,7 +369,7 @@ class SURE(nn.Module):
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  log_theta = concentrate
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  else:
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  rate = concentrate.exp()
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- if self.loss_func == 'negbinomial':
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+ if self.loss_func != 'poisson':
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  theta = dist.DirichletMultinomial(total_count=1, concentration=rate).mean
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  if self.loss_func == 'negbinomial':
@@ -451,7 +451,7 @@ class SURE(nn.Module):
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  log_theta = concentrate
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  else:
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  rate = concentrate.exp()
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- if self.loss_func == 'negbinomial':
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+ if self.loss_func != 'poisson':
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  theta = dist.DirichletMultinomial(total_count=1, concentration=rate).mean
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  if self.loss_func == 'negbinomial':
@@ -545,7 +545,7 @@ class SURE(nn.Module):
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  log_theta = concentrate
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  else:
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  rate = concentrate.exp()
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- if self.loss_func == 'negbinomial':
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+ if self.loss_func != 'poisson':
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  theta = dist.DirichletMultinomial(total_count=1, concentration=rate).mean
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  if self.loss_func == 'negbinomial':
@@ -641,7 +641,7 @@ class SURE(nn.Module):
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  log_theta = concentrate
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  else:
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  rate = concentrate.exp()
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- if self.loss_func == 'negbinomial':
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+ if self.loss_func != 'poisson':
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  theta = dist.DirichletMultinomial(total_count=1, concentration=rate).mean
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  if self.loss_func == 'negbinomial':
{sure_tools-1.0.4 → sure_tools-1.0.5}/SURE_tools.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: SURE-tools
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- Version: 1.0.4
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+ Version: 1.0.5
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  Summary: Succinct Representation of Single Cells
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  Home-page: https://github.com/ZengFLab/SURE
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  Author: Feng Zeng
{sure_tools-1.0.4 → sure_tools-1.0.5}/setup.py RENAMED
@@ -5,7 +5,7 @@ with open("README.md", "r") as fh:
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  setup(
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  name='SURE-tools',
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- version='1.0.4',
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+ version='1.0.5',
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  description='Succinct Representation of Single Cells',
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  long_description=long_description,
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  long_description_content_type="text/markdown",
{sure_tools-1.0.4 → sure_tools-1.0.5}/LICENSE RENAMED
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{sure_tools-1.0.4 → sure_tools-1.0.5}/README.md RENAMED
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{sure_tools-1.0.4 → sure_tools-1.0.5}/SURE/__init__.py RENAMED
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{sure_tools-1.0.4 → sure_tools-1.0.5}/setup.cfg RENAMED
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