SAMBA-ilum 1.1.0.117__tar.gz → 1.1.0.118__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- samba_ilum-1.1.0.118/MANIFEST.in +1 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/PKG-INFO +1 -1
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
- samba_ilum-1.1.0.118/SAMBA_ilum.egg-info/SOURCES.txt +67 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/__main__.py +1 -1
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/Hubbard_U_values.txt +13 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_a-scan +21 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_bader +26 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_bader.SO +27 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_bands +24 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_bands.SO +25 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_dos +25 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_dos.SO +26 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_relax +26 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_scf +25 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_scf.SO +26 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_xy-scan +23 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_xyz-scan +23 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/INCAR_z-scan +23 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +62 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +82 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +95 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +66 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +99 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +208 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +32 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +140 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +167 -0
- samba_ilum-1.1.0.118/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
- samba_ilum-1.1.0.118/samba_ilum/src/bader +0 -0
- samba_ilum-1.1.0.118/samba_ilum/src/chgsum.pl +97 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/setup.py +2 -5
- samba_ilum-1.1.0.117/SAMBA_ilum.egg-info/SOURCES.txt +0 -40
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/LICENSE.txt +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/README.md +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/SAMBA_ilum.egg-info/requires.txt +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/SAMBA_ilum.egg-info/top_level.txt +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/__init__.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/BZ_2D.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/HeteroStructure_Generator.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/_info_pseudo.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/a-scan.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/a-scan_analysis.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/bader_poscar.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/bader_update.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/cell_check.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/charge_transfer.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/contcar_update.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/data-base_json.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/data-base_union.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/energy_scan.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/hubbard_correction.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/job.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/kpoints.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/lattice_plot3d.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/make_files.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/output.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/poscar_fix_direct_coord.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/potcar.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/vdW_DF.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/xy-scan.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/xy-scan_analysis.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/xyz-scan.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/xyz-scan_analysis.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/z-scan.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/samba_ilum/src/z-scan_analysis.py +0 -0
- {samba_ilum-1.1.0.117 → samba_ilum-1.1.0.118}/setup.cfg +0 -0
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recursive-include samba_ilum/src *
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LICENSE.txt
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MANIFEST.in
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README.md
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setup.cfg
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setup.py
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SAMBA_ilum.egg-info/PKG-INFO
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SAMBA_ilum.egg-info/SOURCES.txt
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SAMBA_ilum.egg-info/dependency_links.txt
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SAMBA_ilum.egg-info/entry_points.txt
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SAMBA_ilum.egg-info/requires.txt
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SAMBA_ilum.egg-info/top_level.txt
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samba_ilum/__init__.py
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samba_ilum/__main__.py
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samba_ilum/src/BZ_2D.py
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samba_ilum/src/HeteroStructure_Generator.py
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samba_ilum/src/_info_pseudo.py
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samba_ilum/src/a-scan.py
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samba_ilum/src/a-scan_analysis.py
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samba_ilum/src/bader
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samba_ilum/src/bader_poscar.py
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samba_ilum/src/bader_update.py
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samba_ilum/src/cell_check.py
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samba_ilum/src/charge_transfer.py
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samba_ilum/src/chgsum.pl
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samba_ilum/src/contcar_update.py
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samba_ilum/src/data-base_json.py
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samba_ilum/src/data-base_union.py
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samba_ilum/src/energy_scan.py
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samba_ilum/src/hubbard_correction.py
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samba_ilum/src/job.py
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samba_ilum/src/kpoints.py
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samba_ilum/src/lattice_plot3d.py
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samba_ilum/src/make_files.py
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samba_ilum/src/output.py
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samba_ilum/src/poscar_fix_direct_coord.py
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samba_ilum/src/potcar.py
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samba_ilum/src/vdW_DF.py
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samba_ilum/src/xy-scan.py
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samba_ilum/src/xy-scan_analysis.py
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samba_ilum/src/xyz-scan.py
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samba_ilum/src/xyz-scan_analysis.py
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samba_ilum/src/z-scan.py
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samba_ilum/src/z-scan_analysis.py
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samba_ilum/src/INPUTS/Hubbard_U_values.txt
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samba_ilum/src/INPUTS/INCAR_a-scan
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samba_ilum/src/INPUTS/INCAR_bader
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samba_ilum/src/INPUTS/INCAR_bader.SO
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samba_ilum/src/INPUTS/INCAR_bands
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samba_ilum/src/INPUTS/INCAR_bands.SO
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samba_ilum/src/INPUTS/INCAR_dos
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samba_ilum/src/INPUTS/INCAR_dos.SO
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samba_ilum/src/INPUTS/INCAR_relax
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samba_ilum/src/INPUTS/INCAR_scf
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samba_ilum/src/INPUTS/INCAR_scf.SO
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samba_ilum/src/INPUTS/INCAR_xy-scan
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samba_ilum/src/INPUTS/INCAR_xyz-scan
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samba_ilum/src/INPUTS/INCAR_z-scan
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samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input
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samba_ilum/src/INPUTS/SAMBA_WorkFlow.input
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samba_ilum/src/INPUTS/vdw_kernel.bindat
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals
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samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin
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# SAMBA_ilum Copyright (C) 2025 - Closed source
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U_VALORES = {"Cr": 3.5, "Mn": 3.9, "Fe": 5.3, "Co": 3.3, "Ni": 6.2, "Cu": 4.0,
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"La": 6.0, "Ce": 5.0, "Nd": 5.0, "Sm": 5.0, "Eu": 5.0, "Gd": 5.0,
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"Tb": 5.0, "Dy": 5.0, "Ho": 5.0, "Er": 5.0, "Tm": 5.0, "Yb": 5.0, "U": 4.0}
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LDAUL_VALORES = {"Cr": 2, "Mn": 2, "Fe": 2, "Co": 2, "Ni": 2, "Cu": 2,
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"La": 3, "Ce": 3, "Nd": 3, "Sm": 3, "Eu": 3, "Gd": 3,
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"Tb": 3, "Dy": 3, "Ho": 3, "Er": 3, "Tm": 3, "Yb": 3, "U": 3}
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SYSTEM = "VASP"
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NELMIN = 4
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NELM = 120
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EDIFF = 1E-6
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EDIFFG = -1E-3
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# replace_ispin
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ISMEAR = -1
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SIGMA = 0.001
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NSW = 0
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ISIF = 2
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IBRION = 2
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LREAL = replace_lreal
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ENCUT = replace_encut
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IVDW = replace_vdW
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# vdW_DF
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# AMIN = 0.01
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# KSPACING
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# KGAMMA
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# ALGO
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LORBIT = 10
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# NCORE
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SYSTEM = "VASP"
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NELMIN = 4
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NELM = 120
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EDIFF = 1E-6
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EDIFFG = -1E-3
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replace_ispin
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ISMEAR = -1
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SIGMA = 0.001
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NSW = 0
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ISIF = 2
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IBRION = 2
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LREAL = replace_lreal
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ENCUT = replace_encut
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IVDW = replace_vdW
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# AMIN = 0.01
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# KSPACING
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# KGAMMA
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# # LDIPOL = .TRUE.
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# # IDIPOL = 3
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# # DIPOL
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# MAGNETIC
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# ALGO
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LORBIT = 10
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LAECHG=.TRUE.
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LVTOT = .TRUE.
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# NCORE
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SYSTEM = "VASP-SO"
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NELMIN = 4
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NELM = 120
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EDIFF = 1E-6
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EDIFFG = -1E-3
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ISMEAR = -1
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SIGMA = 0.001
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NSW = 0
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ISIF = 2
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IBRION = 2
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LREAL = replace_lreal
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ENCUT = replace_encut
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IVDW = replace_vdW
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# AMIN = 0.01
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# KSPACING
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# KGAMMA
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# # LDIPOL = .TRUE.
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# # IDIPOL = 3
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# # DIPOL
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# MAGNETIC
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# ALGO
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LSORBIT = .TRUE.
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GGA_COMPAT = .FALSE.
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LORBIT = 10
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LAECHG=.TRUE.
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LVTOT = .TRUE.
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# NCORE
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SYSTEM = "VASP"
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NELMIN = 4
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NELM = 120
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EDIFF = 1E-6
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EDIFFG = -1E-3
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replace_ispin
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ISMEAR = -1
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SIGMA = 0.001
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NSW = 0
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ISIF = 2
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IBRION = 2
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ICHARG = 11
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LCHARG = .FALSE.
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LREAL = replace_lreal
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ENCUT = replace_encut
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IVDW = replace_vdW
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# AMIN = 0.01
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# LDIPOL = .TRUE.
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# IDIPOL = 3
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# DIPOL
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# ALGO
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LORBIT = 11
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LVTOT = .TRUE.
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# NCORE
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|
@@ -0,0 +1,25 @@
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1
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+
SYSTEM = "VASP-SO"
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2
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+
NELMIN = 4
|
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3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
ISMEAR = -1
|
|
7
|
+
SIGMA = 0.001
|
|
8
|
+
NSW = 0
|
|
9
|
+
ISIF = 2
|
|
10
|
+
IBRION = 2
|
|
11
|
+
ICHARG = 11
|
|
12
|
+
LCHARG = .FALSE.
|
|
13
|
+
LREAL = replace_lreal
|
|
14
|
+
ENCUT = replace_encut
|
|
15
|
+
IVDW = replace_vdW
|
|
16
|
+
# AMIN = 0.01
|
|
17
|
+
# LDIPOL = .TRUE.
|
|
18
|
+
# IDIPOL = 3
|
|
19
|
+
# DIPOL
|
|
20
|
+
# ALGO
|
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21
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+
LSORBIT = .TRUE.
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22
|
+
GGA_COMPAT = .FALSE.
|
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23
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+
LORBIT = 11
|
|
24
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+
LVTOT = .TRUE.
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|
25
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+
# NCORE
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@@ -0,0 +1,25 @@
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1
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+
SYSTEM = "VASP"
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2
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+
NELMIN = 4
|
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3
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+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
replace_ispin
|
|
7
|
+
ISMEAR = -5
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NEDOS = 3001
|
|
10
|
+
NSW = 0
|
|
11
|
+
ISIF = 2
|
|
12
|
+
IBRION = 2
|
|
13
|
+
LREAL = replace_lreal
|
|
14
|
+
ENCUT = replace_encut
|
|
15
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+
IVDW = replace_vdW
|
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16
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+
# AMIN = 0.01
|
|
17
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+
# KSPACING
|
|
18
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+
# KGAMMA
|
|
19
|
+
# LDIPOL = .TRUE.
|
|
20
|
+
# IDIPOL = 3
|
|
21
|
+
# DIPOL
|
|
22
|
+
# MAGNETIC
|
|
23
|
+
# ALGO
|
|
24
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+
LORBIT = 11
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25
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+
# NCORE
|
|
@@ -0,0 +1,26 @@
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1
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+
SYSTEM = "VASP-SO"
|
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2
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+
NELMIN = 4
|
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3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
ISMEAR = -5
|
|
7
|
+
SIGMA = 0.001
|
|
8
|
+
NEDOS = 3001
|
|
9
|
+
NSW = 0
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# AMIN = 0.01
|
|
16
|
+
# KSPACING
|
|
17
|
+
# KGAMMA
|
|
18
|
+
# LDIPOL = .TRUE.
|
|
19
|
+
# IDIPOL = 3
|
|
20
|
+
# DIPOL
|
|
21
|
+
# MAGNETIC
|
|
22
|
+
# ALGO
|
|
23
|
+
LSORBIT = .TRUE.
|
|
24
|
+
GGA_COMPAT = .FALSE.
|
|
25
|
+
LORBIT = 11
|
|
26
|
+
# NCORE
|
|
@@ -0,0 +1,26 @@
|
|
|
1
|
+
SYSTEM = "VASP"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
# replace_ispin
|
|
7
|
+
ISMEAR = -1
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NSW = 201
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# vdW_DF
|
|
16
|
+
# AMIN = 0.01
|
|
17
|
+
# KSPACING
|
|
18
|
+
# KGAMMA
|
|
19
|
+
# LDIPOL = .TRUE.
|
|
20
|
+
# IDIPOL = 3
|
|
21
|
+
# DIPOL
|
|
22
|
+
# ALGO
|
|
23
|
+
# LSORBIT = .TRUE.
|
|
24
|
+
# GGA_COMPAT = .FALSE.
|
|
25
|
+
LORBIT = 10
|
|
26
|
+
# NCORE
|
|
@@ -0,0 +1,25 @@
|
|
|
1
|
+
SYSTEM = "VASP"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
replace_ispin
|
|
7
|
+
ISMEAR = -1
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NSW = 0
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# AMIN = 0.01
|
|
16
|
+
# KSPACING
|
|
17
|
+
# KGAMMA
|
|
18
|
+
# LDIPOL = .TRUE.
|
|
19
|
+
# IDIPOL = 3
|
|
20
|
+
# DIPOL
|
|
21
|
+
# MAGNETIC
|
|
22
|
+
# ALGO
|
|
23
|
+
LORBIT = 10
|
|
24
|
+
LVTOT = .TRUE.
|
|
25
|
+
# NCORE
|
|
@@ -0,0 +1,26 @@
|
|
|
1
|
+
SYSTEM = "VASP-SO"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
ISMEAR = -1
|
|
7
|
+
SIGMA = 0.001
|
|
8
|
+
NSW = 0
|
|
9
|
+
ISIF = 2
|
|
10
|
+
IBRION = 2
|
|
11
|
+
LREAL = replace_lreal
|
|
12
|
+
ENCUT = replace_encut
|
|
13
|
+
IVDW = replace_vdW
|
|
14
|
+
# AMIN = 0.01
|
|
15
|
+
# KSPACING
|
|
16
|
+
# KGAMMA
|
|
17
|
+
# LDIPOL = .TRUE.
|
|
18
|
+
# IDIPOL = 3
|
|
19
|
+
# DIPOL
|
|
20
|
+
# MAGNETIC
|
|
21
|
+
# ALGO
|
|
22
|
+
LSORBIT = .TRUE.
|
|
23
|
+
GGA_COMPAT = .FALSE.
|
|
24
|
+
LORBIT = 10
|
|
25
|
+
LVTOT = .TRUE.
|
|
26
|
+
# NCORE
|
|
@@ -0,0 +1,23 @@
|
|
|
1
|
+
SYSTEM = "VASP"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
# replace_ispin
|
|
7
|
+
ISMEAR = -1
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NSW = 0
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# vdW_DF
|
|
16
|
+
# AMIN = 0.01
|
|
17
|
+
# KSPACING
|
|
18
|
+
# KGAMMA
|
|
19
|
+
# ALGO
|
|
20
|
+
# LSORBIT = .TRUE.
|
|
21
|
+
# GGA_COMPAT = .FALSE.
|
|
22
|
+
LORBIT = 10
|
|
23
|
+
# NCORE
|
|
@@ -0,0 +1,23 @@
|
|
|
1
|
+
SYSTEM = "VASP"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
# replace_ispin
|
|
7
|
+
ISMEAR = -1
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NSW = 0
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# vdW_DF
|
|
16
|
+
# AMIN = 0.01
|
|
17
|
+
# KSPACING
|
|
18
|
+
# KGAMMA
|
|
19
|
+
# ALGO
|
|
20
|
+
# LSORBIT = .TRUE.
|
|
21
|
+
# GGA_COMPAT = .FALSE.
|
|
22
|
+
LORBIT = 10
|
|
23
|
+
# NCORE
|
|
@@ -0,0 +1,23 @@
|
|
|
1
|
+
SYSTEM = "VASP"
|
|
2
|
+
NELMIN = 4
|
|
3
|
+
NELM = 120
|
|
4
|
+
EDIFF = 1E-6
|
|
5
|
+
EDIFFG = -1E-3
|
|
6
|
+
# replace_ispin
|
|
7
|
+
ISMEAR = -1
|
|
8
|
+
SIGMA = 0.001
|
|
9
|
+
NSW = 0
|
|
10
|
+
ISIF = 2
|
|
11
|
+
IBRION = 2
|
|
12
|
+
LREAL = replace_lreal
|
|
13
|
+
ENCUT = replace_encut
|
|
14
|
+
IVDW = replace_vdW
|
|
15
|
+
# vdW_DF
|
|
16
|
+
# AMIN = 0.01
|
|
17
|
+
# KSPACING
|
|
18
|
+
# KGAMMA
|
|
19
|
+
# ALGO
|
|
20
|
+
# LSORBIT = .TRUE.
|
|
21
|
+
# GGA_COMPAT = .FALSE.
|
|
22
|
+
LORBIT = 10
|
|
23
|
+
# NCORE
|
|
@@ -0,0 +1,62 @@
|
|
|
1
|
+
# SAMBA Copyright (C) 2025 - Closed source
|
|
2
|
+
|
|
3
|
+
#=========================================================================================================================
|
|
4
|
+
# Important notes !!! ====================================================================================================
|
|
5
|
+
#=========================================================================================================================
|
|
6
|
+
# Use only 2D lattices whose vectors (A1,A2) lie in the KxKy plane, and whose vector A3 lies in the z-axis direction -----
|
|
7
|
+
# A1 = (A1x, A1y, 0.0) | A2 = (A2x, A2y, 0.0) | A3 = (0.0, 0.0, A3z)
|
|
8
|
+
#-------------------------------------------------------------------------------------------------------------------------
|
|
9
|
+
# Use a 2D unit cell for each material, non-unit cells limit the number of structures generated, in addition to introducing
|
|
10
|
+
# "slowness" in the code execution ---------------------------------------------------------------------------------------
|
|
11
|
+
#=========================================================================================================================
|
|
12
|
+
|
|
13
|
+
#=========================================================================================================================
|
|
14
|
+
# Tuning parameters: =====================================================================================================
|
|
15
|
+
#=========================================================================================================================
|
|
16
|
+
dir_o = 'Structures' # Heterostructures Output Directory
|
|
17
|
+
dir_poscar = 'POSCAR' # Location directory of POSCAR files to be used
|
|
18
|
+
|
|
19
|
+
#=============================================================================================================
|
|
20
|
+
# Enable or Disable code execution in Loop: functional only to generate bilayers (n_Lattice = 2) =============
|
|
21
|
+
#=============================================================================================================
|
|
22
|
+
loop_ht = 0 # [0] Disables; [1] Enables the loop, generating heterostructures for all combinations of
|
|
23
|
+
# POSCAR files contained in the "dir_poscar" directory
|
|
24
|
+
#===============================================================
|
|
25
|
+
# Parameters if the loop is Disabled ===========================
|
|
26
|
+
#===============================================================
|
|
27
|
+
if (loop_ht == 0):
|
|
28
|
+
n_Lattice = 2 # number of materials to be stacked, use 2 or 3.
|
|
29
|
+
Lattice1 = 'C2.vasp' # 1st Material "Substrate: Material initially kept fixed
|
|
30
|
+
Lattice2 = 'hBN.vasp' # 2nd Material "Material to be deposited on the Substrate"
|
|
31
|
+
Lattice3 = 'SnTe.vasp' # 3rd Material "Material to be deposited on the 2nd Material"
|
|
32
|
+
|
|
33
|
+
#===============================================================
|
|
34
|
+
# Other parameters =============================================
|
|
35
|
+
#===============================================================
|
|
36
|
+
separation_1 = 3.00 # Separation distance (in Angs.) between the 1st and 2nd material.
|
|
37
|
+
separation_2 = 3.00 # Separation distance (in Angs.) between the 2nd and 3rd material.
|
|
38
|
+
vacuum = 15.0 # Vacuum (in Angs.) to be introduced into the Heterostructure cell.
|
|
39
|
+
#----------------------------------
|
|
40
|
+
cell_fator = [10, 10] # Ranges of the loop on the linear combination of vectors A1 and A2.
|
|
41
|
+
# Note: Very high values can lead to excessive code slowness.
|
|
42
|
+
#----------------------------------
|
|
43
|
+
crit_mod_vector = 3 # Percentage variation % of the module between the vectors (A and B) of the lattices: A1_with_A2 and B1_with_B2
|
|
44
|
+
crit_distorc_lattice = 3 # Percentage variation % of the module between the vectors (A and B) of the same lattice: A1_with_B1 and A2_with_B2
|
|
45
|
+
crit_angle_perc = 2 # Percentage variation % of the angle formed between the vectors (A and B) of the lattices: Theta1_with_Theta2
|
|
46
|
+
crit_angle_diff = 2 # Variation (in module) of the angle in degrees (º) formed between the vectors (A and B) of the lattices: Theta1_with_Theta2
|
|
47
|
+
crit_area = 5 # Percentage variation % of the area of the lattices that will make up the Heterostructure: Area1_with_Area2
|
|
48
|
+
#----------------------------------
|
|
49
|
+
ions_crit_i = 1 # Criterion for the minimum number of atoms allowed in the Heterostructure.
|
|
50
|
+
ions_crit_f = 100 # Criterion for the maximum number of atoms allowed in the Heterostructure.
|
|
51
|
+
# Note: When looping many structures, I advise sweeping small ranges of ions for example: (1, 10); (10, 20); (50,60)
|
|
52
|
+
#----------------------------------
|
|
53
|
+
# By default we will always have: angle > 0.0 and angle < 180.0
|
|
54
|
+
angle_min = 15.0 # Minimum opening angle between vectors A1 and A2
|
|
55
|
+
angle_max = 165.0 # Maximum opening angle between vectors A1 and A2
|
|
56
|
+
#----------------------------------
|
|
57
|
+
mismatch_type = 0 # Applied deformation: [0] Distributed proportionally among the materials
|
|
58
|
+
# [1], [2] or [3] keeps the 1st, 2nd or 3rd material fixed, deforming the others.
|
|
59
|
+
#----------------------------------
|
|
60
|
+
rot_angle_calc = 'center_cell' # 'center_cell', 'A1' or 'A2': Vector with respect to which the rotation angle between the materials is calculated
|
|
61
|
+
#----------------------------------
|
|
62
|
+
|
|
@@ -0,0 +1,82 @@
|
|
|
1
|
+
# SAMBA Copyright (C) 2025 - Closed source
|
|
2
|
+
|
|
3
|
+
|
|
4
|
+
#=======================================================
|
|
5
|
+
# Python virtual environment directory -----------------
|
|
6
|
+
dir_virtual_python = '/home/dlelis/codes/python_virtual'
|
|
7
|
+
#=======================================================
|
|
8
|
+
# Workflow Output Directory ----------------------------
|
|
9
|
+
dir_o = 'WorkFlow_output'
|
|
10
|
+
#=======================================================
|
|
11
|
+
# information to be added to the database --------------
|
|
12
|
+
replace_type_pseudo = 'PAW_PBE'; replace_type_XC = 'GGA'
|
|
13
|
+
#=======================================================
|
|
14
|
+
|
|
15
|
+
|
|
16
|
+
#=======================================================
|
|
17
|
+
type_lattice = 2 # [1] 1D lattices (Periodic in X); [2] 2D lattices (Periodic in XY); [3] 3D lattices - Bulk
|
|
18
|
+
#=======================================================
|
|
19
|
+
tasks = ['relax', 'scf', 'bands', 'dos'] # tasks = ['z-scan', 'xy-scan', 'relax', 'scf', 'bands', 'dos', 'bader']
|
|
20
|
+
type = ['sem_SO','com_SO'] # type = ['sem_SO','com_SO']
|
|
21
|
+
#=======================================================
|
|
22
|
+
ispin = 2 # [1] for non-spin-polarized calculation; [2] for spin-polarized calculation
|
|
23
|
+
#=======================================================
|
|
24
|
+
dipol = 'none' # Use the options: 'none', 'center_cell' or 'center_mass'
|
|
25
|
+
#=======================================================
|
|
26
|
+
magnet_mode = 'default' # Use the options: 'default', 'MAGMOM=0' or 'NUPDOWN=0'
|
|
27
|
+
#=======================================================
|
|
28
|
+
U_correction = 0 # Hubbard Correction (U): [0] to disable, [1] to enable
|
|
29
|
+
#=======================================================
|
|
30
|
+
vdW = 0 # Van der Waals correction used: [0] disables van der Waals correction.
|
|
31
|
+
# Correction applied to all calculations (with and without OS)
|
|
32
|
+
#-------------------------------------------------------
|
|
33
|
+
vdWDF = 'none' # Non-local functional vdW_DF used: 'none' disables the non-local functional vdW_DF.
|
|
34
|
+
# Choice: 'none', 'DF', 'DF2', 'optPBE', 'optB88', 'optB86b', 'rev-DF2', 'DF-cx', 'DF3-opt1', 'DF3-opt2'
|
|
35
|
+
# Note: Functional applied only in structural optimization calculations ('xyz-scan', 'xy-scan', 'z-scan', 'a-scan', 'relax')
|
|
36
|
+
# Note: vdW != 0 will override any choice of vdWDF
|
|
37
|
+
#=======================================================
|
|
38
|
+
ENCUT_min = 500 # Minimum value for cut-off energy in eV
|
|
39
|
+
# Note: If (ENCUT_min < ENCUT*fator_encut), then ENCUT_min = ENCUT*encut_factor
|
|
40
|
+
# ENCUT refers to the highest cutting energy value present in the POTCAR file
|
|
41
|
+
fator_encut = 1.3 # Multiplication factor for the criterion of the cutting energy used
|
|
42
|
+
#=======================================================
|
|
43
|
+
type_k_dens = 1 # [1] KPOINTS (Monkhorst-Pack); [2] KPOINTS (Gamma); [3] INCAR (KSPACING Monkhorst-Pack); [4] INCAR (KSPACING Gamma)
|
|
44
|
+
k_dens_relax = 12 # Relaxation calculation: number of k-points per Å^-1
|
|
45
|
+
k_dens_scf = 12 # Self-consistent calculation (scf): number of k-points per Å^-1
|
|
46
|
+
k_dens_dos = 12 # DOS Calculation: number of k-points per Å^-1
|
|
47
|
+
k_dens_bader = 12 # Bader Charge Calculation: number of k-points perr Å^-1
|
|
48
|
+
n_kpoints = 50 # Band calculation (nscf): number of k-points in each section of the band plot
|
|
49
|
+
nions_split = 100 # number of ions in the POSCAR file, so that the band calculation is performed in steps (split)
|
|
50
|
+
vacuum = 15.0 # Vacuum applied to Heterostructure
|
|
51
|
+
NCORE = 8 # Number of "cores" per "node"
|
|
52
|
+
|
|
53
|
+
|
|
54
|
+
#============================
|
|
55
|
+
# a-scan parameters =========
|
|
56
|
+
# Functional for 3D bulk ====
|
|
57
|
+
#============================
|
|
58
|
+
k_dens_a_scan = 6 # a-scan calculation: number of k-points per Å^-1
|
|
59
|
+
factor_var = 5 # % variation of the lattice parameter (modulo the smallest lattice vector)
|
|
60
|
+
|
|
61
|
+
|
|
62
|
+
#============================
|
|
63
|
+
# z-scan parameters =========
|
|
64
|
+
#============================
|
|
65
|
+
k_dens_z_scan = 6 # z-scan calculation: number of k-points per Å^-1
|
|
66
|
+
|
|
67
|
+
|
|
68
|
+
#============================
|
|
69
|
+
# xy-scan parameters ========
|
|
70
|
+
#============================
|
|
71
|
+
k_dens_xy_scan = 6 # xy-scan calculation: number of k-points per Å^-1
|
|
72
|
+
r_displacement_A1 = [0.0, (1/8), (1/6), (1/4), (1/3), (1/2), (2/3), (3/4), (5/6)] # Displacements in the direction of vector A1 (2nd material)
|
|
73
|
+
r_displacement_A2 = [0.0, (1/8), (1/6), (1/4), (1/3), (1/2), (2/3), (3/4), (5/6)] # Displacements in the direction of vector A2 (2nd material)
|
|
74
|
+
|
|
75
|
+
|
|
76
|
+
#============================
|
|
77
|
+
# xyz-scan parameters =======
|
|
78
|
+
#============================
|
|
79
|
+
k_dens_xyz_scan = 6 # xyz-scan calculation: number of k-points Å^-1
|
|
80
|
+
displacement_Z = [1.5, 2.0, 2.5, 3.0, 3.5, 4.0, 4.5] # Vertical separation (z-axis) between layers
|
|
81
|
+
displacement_xyz_A1 = [0.0, 0.2, 0.4, 0.6, 0.8] # Displacements in the direction of vector A1 (2nd material)
|
|
82
|
+
displacement_xyz_A2 = [0.0, 0.2, 0.4, 0.6, 0.8] # Displacements in the direction of vector A2 (2nd material)
|