SAMBA-ilum 1.0.0.496__tar.gz → 1.0.0.498__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (67) hide show
  1. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/PKG-INFO +1 -1
  2. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
  3. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/SOURCES.txt +1 -3
  4. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/__main__.py +2 -2
  5. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/HeteroStructure_Generator.py +2 -3
  6. samba_ilum-1.0.0.496/samba_ilum/src/rotation_axis_check.py → samba_ilum-1.0.0.498/samba_ilum/src/cell_check.py +21 -18
  7. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/setup.py +1 -1
  8. samba_ilum-1.0.0.496/samba_ilum/src/HeteroStructure_Generator_OLD_1.py +0 -2116
  9. samba_ilum-1.0.0.496/samba_ilum/src/HeteroStructure_Generator_OLD_2.py +0 -2177
  10. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/LICENSE.txt +0 -0
  11. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/README.md +0 -0
  12. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
  13. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
  14. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/requires.txt +0 -0
  15. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/SAMBA_ilum.egg-info/top_level.txt +0 -0
  16. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/__init__.py +0 -0
  17. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/BZ_2D.py +0 -0
  18. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
  19. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
  20. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
  21. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
  22. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
  23. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
  24. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
  25. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
  26. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
  27. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
  28. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
  29. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
  30. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
  31. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +0 -0
  32. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
  33. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
  34. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
  35. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
  36. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
  37. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
  38. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
  39. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
  40. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
  41. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/_info_pseudo.py +0 -0
  42. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/a-scan.py +0 -0
  43. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/a-scan_analysis.py +0 -0
  44. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/bader +0 -0
  45. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/bader_poscar.py +0 -0
  46. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/bader_update.py +0 -0
  47. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/charge_transfer.py +0 -0
  48. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/chgsum.pl +0 -0
  49. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/contcar_update.py +0 -0
  50. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/data-base_json.py +0 -0
  51. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/data-base_union.py +0 -0
  52. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/energy_scan.py +0 -0
  53. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/hubbard_correction.py +0 -0
  54. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/job.py +0 -0
  55. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/kpoints.py +0 -0
  56. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/lattice_plot3d.py +0 -0
  57. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/make_files.py +0 -0
  58. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/output.py +0 -0
  59. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/potcar.py +0 -0
  60. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/vdW_DF.py +0 -0
  61. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/xy-scan.py +0 -0
  62. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/xy-scan_analysis.py +0 -0
  63. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/xyz-scan.py +0 -0
  64. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/xyz-scan_analysis.py +0 -0
  65. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/z-scan.py +0 -0
  66. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/samba_ilum/src/z-scan_analysis.py +0 -0
  67. {samba_ilum-1.0.0.496 → samba_ilum-1.0.0.498}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA_ilum
3
- Version: 1.0.0.496
3
+ Version: 1.0.0.498
4
4
  Summary: ...
5
5
  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA_ilum
3
- Version: 1.0.0.496
3
+ Version: 1.0.0.498
4
4
  Summary: ...
5
5
  Author: Augusto de Lelis Araujo
6
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  Author-email: augusto-lelis@outlook.com
@@ -12,14 +12,13 @@ samba_ilum/__init__.py
12
12
  samba_ilum/__main__.py
13
13
  samba_ilum/src/BZ_2D.py
14
14
  samba_ilum/src/HeteroStructure_Generator.py
15
- samba_ilum/src/HeteroStructure_Generator_OLD_1.py
16
- samba_ilum/src/HeteroStructure_Generator_OLD_2.py
17
15
  samba_ilum/src/_info_pseudo.py
18
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  samba_ilum/src/a-scan.py
19
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  samba_ilum/src/a-scan_analysis.py
20
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  samba_ilum/src/bader
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  samba_ilum/src/bader_poscar.py
22
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  samba_ilum/src/bader_update.py
21
+ samba_ilum/src/cell_check.py
23
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  samba_ilum/src/charge_transfer.py
24
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  samba_ilum/src/chgsum.pl
25
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  samba_ilum/src/contcar_update.py
@@ -33,7 +32,6 @@ samba_ilum/src/lattice_plot3d.py
33
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  samba_ilum/src/make_files.py
34
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  samba_ilum/src/output.py
35
34
  samba_ilum/src/potcar.py
36
- samba_ilum/src/rotation_axis_check.py
37
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  samba_ilum/src/vdW_DF.py
38
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  samba_ilum/src/xy-scan.py
39
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  samba_ilum/src/xy-scan_analysis.py
@@ -16,7 +16,7 @@ dir_samba = os.path.dirname(os.path.realpath(__file__))
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  print(f'{dir_samba}')
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  #--------------------
18
18
 
19
- version = '1.0.0.496'
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+ version = '1.0.0.498'
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21
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  print(" ")
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  print("=============================================================")
@@ -125,7 +125,7 @@ if (tarefa == 1):
125
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  # Checagem da estrutura dos arquivos POSCAR, com relação
126
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  # ao ângulo de rotação em relação ao eixo-z ============
127
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  #=======================================================
128
- exec(open(dir_codes + '/rotation_axis_check.py').read())
128
+ exec(open(dir_codes + '/cell_check.py').read())
129
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  #=======================================================
130
130
 
131
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@@ -42,11 +42,10 @@ alphabet = ['A', 'B', 'C', 'D', 'E', 'F', 'G', 'H', 'I', 'J', 'K', 'L', 'M',
42
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  for k in range(40):
43
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  for i in range(len(letters)):
44
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  alphabet.append(letters[i] + str(k+1))
45
- #--------------------------------------------------------------------------------------------
46
- vLattice = [dir_poscar + '/' + Lattice1, dir_poscar + '/' + Lattice2, dir_poscar + '/' + Lattice3]; n = n_Lattice -2
45
+ #-------------------------------------------------------
47
46
  label_htstructure = ''; label_material = ['']*n_Lattice
48
47
  dZ = [0]*3; dens_ions = [0]*3; n = 0
49
- #--------------------------------------------------------------------------------------------
48
+ #--------------------------------------------------------------------------------
50
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  orig = 0 # [0] O centro da SuperCélula será a origem do sistema de coordenadas.
51
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  # [1] O centro do vetor A1 da SuperCélula será a origem do sistema de coordenadas.
52
51
  #--------------------------------------------------------------------------------------------
@@ -17,14 +17,19 @@ import sys
17
17
  import os
18
18
 
19
19
 
20
+ # Listando os arquivos dentro do diretório "dir_poscar"
21
+ poscar_dir_path = os.path.join(dir_files, dir_poscar)
22
+ files0 = [name for name in os.listdir(poscar_dir_path) if os.path.isfile(os.path.join(poscar_dir_path, name))]
23
+
24
+
20
25
  #---------------------------------------------------
21
26
  # Testando a compatibilidade dos arquivos POSCAR ---
22
27
  #---------------------------------------------------
23
28
  A1x0 = []; A1y0 = []; A2x0 = []; A2y0 = []
24
29
  #--------------------------------------------
25
- for k in range(n_Lattice):
26
- #---------------------
27
- Lattice = dir_files + '/' + vLattice[k]
30
+ for k in range(len(files0)):
31
+ #-----------------------
32
+ Lattice = dir_files + '/' + files0[k]
28
33
  poscar = open(Lattice, "r")
29
34
  #-------------------------------------------
30
35
  for i in range(2): VTemp = poscar.readline()
@@ -37,26 +42,24 @@ for k in range(n_Lattice):
37
42
  A1x0.append(A1x); A1y0.append(A1y); A2x0.append(A2x); A2y0.append(A2y) # Armazenando os vetores A1 e A2 de cada rede
38
43
  #------------------------------------------------------------------------------------------------------------------------
39
44
  if ((A1z != 0.0) or (A2z != 0.0) or (A3x != 0.0) or (A3y != 0.0)):
40
- print(f' ')
41
45
  print(f'========================================')
42
46
  print(f'Verifique os arquivos POSCAR utilizados!')
43
- print(f'INCOMPATIBILIDADE com o código detectada')
44
- if (A1z != 0.0):
45
- print(f'O vetor A1 deve possuir a forma A1 = [A1x, A1y, 0.0]')
46
- if (A2z != 0.0):
47
- print(f'O vetor A2 deve possuir a forma A2 = [A2x, A2y, 0.0]')
48
- if ((A3x != 0.0) or (A3y != 0.0)):
49
- print(f'O vetor A3 deve possuir a forma A3 = [0.0, 0.0, A3z]')
47
+ print(f'Incompatibilidade com o código detectada')
48
+ print(f'Somente redes 2D no plano XY são aceitos')
49
+ print(f'----------------------------------------')
50
+ print(f'Os vetores de rede devem possuir a forma')
51
+ print(f'A1 = [A1x, A1y, 0.0]')
52
+ print(f'A2 = [A2x, A2y, 0.0]')
53
+ print(f'A3 = [0.0, 0.0, A3z]')
50
54
  print(f'========================================')
51
55
  print(f' ')
52
- #==========
56
+ #=============
57
+ poscar.close()
53
58
  sys.exit()
54
- #=========
55
-
56
-
57
- # Listando os arquivos dentro do diretório "dir_poscar"
58
- poscar_dir_path = os.path.join(dir_files, dir_poscar)
59
- files0 = [name for name in os.listdir(poscar_dir_path) if os.path.isfile(os.path.join(poscar_dir_path, name))]
59
+ #=============
60
+ poscar.close()
61
+ sys.exit()
62
+ #=========
60
63
 
61
64
  #------------
62
65
  stop_code = 0
@@ -6,7 +6,7 @@ import json
6
6
 
7
7
  setup(
8
8
  name = "SAMBA_ilum",
9
- version = "1.0.0.496",
9
+ version = "1.0.0.498",
10
10
  entry_points={'console_scripts': ['samba_ilum = samba_ilum:main']},
11
11
  description = "...",
12
12
  author = "Augusto de Lelis Araujo",