SAMBA-ilum 1.0.0.467__tar.gz → 1.0.0.468__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/PKG-INFO +1 -1
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/__main__.py +1 -1
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/job.py +29 -29
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/setup.py +1 -1
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/LICENSE.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/README.md +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/SOURCES.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/requires.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/SAMBA_ilum.egg-info/top_level.txt +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/__init__.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/BZ_2D.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/HeteroStructure_Generator.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/_info_pseudo.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/a-scan.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/a-scan_analysis.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/bader +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/bader_poscar.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/bader_update.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/charge_transfer.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/chgsum.pl +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/contcar_update.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/data-base_json.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/data-base_union.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/energy_scan.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/hubbard_correction.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/kpoints.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/lattice_plot3d.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/make_files.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/output.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/potcar.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/vdW_DF.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/xy-scan.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/xy-scan_analysis.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/xyz-scan.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/xyz-scan_analysis.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/z-scan.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/z-scan_analysis.py +0 -0
- {samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/setup.cfg +0 -0
|
@@ -112,10 +112,10 @@ job.write(f' echo "$dir0/$i/$j" >> "$dir0/check_list.txt" \n')
|
|
|
112
112
|
job.write(f' #===================================================== \n')
|
|
113
113
|
job.write(f' if [[ "$j" == "xyz-scan" || "$j" == "xy-scan" ]]; then \n')
|
|
114
114
|
job.write(f' cd $dir0/$i/$j \n')
|
|
115
|
-
job.write(f' python3 contcar_update.py \n')
|
|
115
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
116
116
|
job.write(f' cp POSCAR POSCAR.0 \n')
|
|
117
117
|
job.write(f' cp CONTCAR CONTCAR.0 \n')
|
|
118
|
-
job.write(" python3 ${j}.py \n")
|
|
118
|
+
job.write(" python3 ${j}.py || echo "Erro no ${j}.py em $dir0/$i/$j" >> $dir0/error_log.txt \n")
|
|
119
119
|
job.write(f' #--------------- \n')
|
|
120
120
|
job.write(f' folders2=() \n')
|
|
121
121
|
job.write(f' for folder in $dir0/$i/$j/*; do \n')
|
|
@@ -126,15 +126,15 @@ job.write(f' done \n')
|
|
|
126
126
|
job.write(f' #------------------------ \n')
|
|
127
127
|
job.write(f' for k in "{folders2}"; do \n')
|
|
128
128
|
job.write(f' cd $dir0/$i/$j/$k \n')
|
|
129
|
-
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
130
|
-
job.write(f' python3 contcar_update.py \n')
|
|
131
|
-
job.write(f' python3 energy_scan.py \n')
|
|
129
|
+
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
130
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
131
|
+
job.write(f' python3 energy_scan.py || echo "Erro no energy_scan.py em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
132
132
|
job.write(f' rm -r CHG CHGCAR DOSCAR PROCAR WAVECAR INCAR KPOINTS OSZICAR PCDAT POTCAR REPORT XDATCAR vdw_kernel.bindat EIGENVAL IBZKPT vasprun.xml *.py \n')
|
|
133
133
|
job.write(f' bzip2 OUTCAR \n')
|
|
134
134
|
job.write(f' done \n')
|
|
135
135
|
job.write(f' #------------- \n')
|
|
136
136
|
job.write(f' cd $dir0/$i/$j \n')
|
|
137
|
-
job.write(" python3 ${j}_analysis.py \n")
|
|
137
|
+
job.write(" python3 ${j}_analysis.py || echo "Erro no ${j}_analysis.py em $dir0/$i/$j" >> $dir0/error_log.txt \n")
|
|
138
138
|
job.write(" # rm -r 0* 1* 2* 3* 4* 5* 6* 7* 8* 9* \n")
|
|
139
139
|
job.write(f' #----------------------- \n')
|
|
140
140
|
job.write(f' for k in "{tasks2}"; do \n')
|
|
@@ -151,12 +151,12 @@ job.write(f' cp $dir0/$i/$j/POSCAR $dir0/$i/output/POSCAR \n
|
|
|
151
151
|
job.write(f' #==================================================== \n')
|
|
152
152
|
job.write(f' elif [[ "$j" == "z-scan" || "$j" == "a-scan" ]]; then \n')
|
|
153
153
|
job.write(f' cd $dir0/$i/$j \n')
|
|
154
|
-
job.write(f' python3 contcar_update.py \n')
|
|
154
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
155
155
|
job.write(f' cp POSCAR POSCAR.0 \n')
|
|
156
156
|
job.write(f' cp CONTCAR CONTCAR.0 \n')
|
|
157
157
|
job.write(" for p in {1..8}; do \n")
|
|
158
158
|
job.write(f' echo "$p" > "$dir0/$i/$j/check_steps.txt" \n')
|
|
159
|
-
job.write(" python3 ${j}.py \n")
|
|
159
|
+
job.write(" python3 ${j}.py || echo "Erro no ${j}.py em $dir0/$i/$j" >> $dir0/error_log.txt \n")
|
|
160
160
|
job.write(f' #--------------- \n')
|
|
161
161
|
job.write(f' folders2=() \n')
|
|
162
162
|
job.write(f' for folder in $dir0/$i/$j/*; do \n')
|
|
@@ -169,9 +169,9 @@ job.write(f' for k in "{folders2}"; do \n')
|
|
|
169
169
|
job.write(" prefixo=${k:0:3} \n")
|
|
170
170
|
job.write(f' if [ "$prefixo" != "OK_" ]; then \n')
|
|
171
171
|
job.write(f' cd $dir0/$i/$j/$k \n')
|
|
172
|
-
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
173
|
-
job.write(f' python3 contcar_update.py \n')
|
|
174
|
-
job.write(f' python3 energy_scan.py \n')
|
|
172
|
+
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
173
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
174
|
+
job.write(f' python3 energy_scan.py || echo "Erro no energy_scan.py em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
175
175
|
job.write(f' rm -r CHG CHGCAR DOSCAR PROCAR WAVECAR INCAR KPOINTS OSZICAR PCDAT POTCAR REPORT XDATCAR vdw_kernel.bindat EIGENVAL IBZKPT vasprun.xml *.py \n')
|
|
176
176
|
job.write(f' bzip2 OUTCAR \n')
|
|
177
177
|
job.write(f' cd $dir0/$i/$j \n')
|
|
@@ -191,7 +191,7 @@ job.write(f' for k in "{folders2}"; do \n')
|
|
|
191
191
|
job.write(" new_name=${k:3} \n")
|
|
192
192
|
job.write(f' mv "$k" "$new_name" \n')
|
|
193
193
|
job.write(f' done \n')
|
|
194
|
-
job.write(" python3 ${j}_analysis.py \n")
|
|
194
|
+
job.write(" python3 ${j}_analysis.py || echo "Erro no ${j}_analysis.py em $dir0/$i/$j" >> $dir0/error_log.txt \n")
|
|
195
195
|
job.write(" # rm -r 0* 1* 2* 3* 4* 5* 6* 7* 8* 9* \n")
|
|
196
196
|
job.write(f' #----------------------- \n')
|
|
197
197
|
job.write(f' for k in "{tasks2}"; do \n')
|
|
@@ -221,7 +221,7 @@ job.write(f' #---------------------- \n')
|
|
|
221
221
|
job.write(f' mv INCAR_relax INCAR \n')
|
|
222
222
|
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
223
223
|
job.write(f' rm -r CHG CHGCAR DOSCAR PROCAR WAVECAR EIGENVAL IBZKPT vasprun.xml \n')
|
|
224
|
-
job.write(f' python3 contcar_update.py \n')
|
|
224
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
225
225
|
job.write(f' #------------------------ \n')
|
|
226
226
|
job.write(f' for k in "{tasks2}"; do \n')
|
|
227
227
|
job.write(f' #-------------------------------------------------- \n')
|
|
@@ -253,13 +253,13 @@ job.write(f' fi \n')
|
|
|
253
253
|
job.write(f' done \n')
|
|
254
254
|
job.write(f' fi \n')
|
|
255
255
|
job.write(f' #------------------- \n')
|
|
256
|
-
job.write(f' python3 -m vasprocar \n')
|
|
256
|
+
job.write(f' python3 -m vasprocar || echo "Erro no VASPROCAR em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
257
257
|
job.write(f' #------------------- \n')
|
|
258
258
|
job.write(f' # rm -r CHG DOSCAR WAVECAR EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
259
259
|
job.write(f' # bzip2 CHGCAR OUTCAR PROCAR LOCPOT \n')
|
|
260
260
|
job.write(f' rm -r CHG DOSCAR WAVECAR \n')
|
|
261
261
|
job.write(f' bzip2 CHGCAR OUTCAR PROCAR LOCPOT EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
262
|
-
job.write(f' python3 contcar_update.py \n')
|
|
262
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
263
263
|
job.write(f' #----------------------------------------------- \n')
|
|
264
264
|
job.write(f' cp $dir0/$i/$j/CONTCAR $dir0/$i/output/CONTCAR \n')
|
|
265
265
|
job.write(f' cp $dir0/$i/$j/POSCAR $dir0/$i/output/POSCAR \n')
|
|
@@ -297,7 +297,7 @@ job.write(f' fi \n')
|
|
|
297
297
|
job.write(f' #----------------------------------- \n')
|
|
298
298
|
job.write(f' # rm -r CHG DOSCAR WAVECAR EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
299
299
|
job.write(f' rm -r CHG DOSCAR WAVECAR \n')
|
|
300
|
-
job.write(f' python3 contcar_update.py \n')
|
|
300
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
301
301
|
job.write(f' #----------------------------------- \n')
|
|
302
302
|
job.write(f' if [ "$string4" != "KPOINTS" ]; then \n')
|
|
303
303
|
job.write(f' cp OUTCAR OUTCAR.$string4 \n')
|
|
@@ -307,7 +307,7 @@ job.write(f' fi \n')
|
|
|
307
307
|
job.write(f' fi \n')
|
|
308
308
|
job.write(f' done \n')
|
|
309
309
|
job.write(f' #------------------- \n')
|
|
310
|
-
job.write(f' python3 -m vasprocar \n')
|
|
310
|
+
job.write(f' python3 -m vasprocar || echo "Erro no VASPROCAR em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
311
311
|
job.write(f' #------------------- \n')
|
|
312
312
|
job.write(f' # bzip2 CHGCAR OUTCAR* PROCAR* LOCPOT \n')
|
|
313
313
|
job.write(f' bzip2 CHGCAR OUTCAR* PROCAR* LOCPOT EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
@@ -327,17 +327,17 @@ job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/
|
|
|
327
327
|
job.write(f' elif [ "$string2" == "SO" ]; then \n')
|
|
328
328
|
job.write(f' $vasp_ncl || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
329
329
|
job.write(f' fi \n')
|
|
330
|
-
job.write(f' python3 -m vasprocar \n')
|
|
330
|
+
job.write(f' python3 -m vasprocar || echo "Erro no VASPROCAR em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
331
331
|
job.write(f' # rm -r CHG WAVECAR EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
332
332
|
job.write(f' # bzip2 CHGCAR OUTCAR DOSCAR PROCAR \n')
|
|
333
333
|
job.write(f' rm -r CHG WAVECAR \n')
|
|
334
334
|
job.write(f' bzip2 CHGCAR OUTCAR DOSCAR PROCAR EIGENVAL IBZKPT OSZICAR PCDAT XDATCAR vasprun.xml \n')
|
|
335
|
-
job.write(f' python3 contcar_update.py \n')
|
|
335
|
+
job.write(f' python3 contcar_update.py || echo "Erro no contcar_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
336
336
|
job.write(f' cp $dir0/$i/$j/CONTCAR $dir0/$i/output/CONTCAR \n')
|
|
337
337
|
job.write(f' cp $dir0/$i/$j/POSCAR $dir0/$i/output/POSCAR \n')
|
|
338
338
|
job.write(f' #=================================== \n')
|
|
339
339
|
job.write(f' elif [ "$string1" == "bader" ]; then \n')
|
|
340
|
-
job.write(f' python3 bader_update.py \n')
|
|
340
|
+
job.write(f' python3 bader_update.py || echo "Erro no bader_update.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
341
341
|
job.write(f' #---------------------- \n')
|
|
342
342
|
job.write(f' folders2=() \n')
|
|
343
343
|
job.write(f' for folder in $dir0/$i/$j/*; do \n')
|
|
@@ -350,11 +350,11 @@ job.write(f' for k in "{folders2}"; do \n')
|
|
|
350
350
|
job.write(f' if [ "$k" != "Charge_transfer" ]; then \n')
|
|
351
351
|
job.write(f' cd $dir0/$i/$j/$k \n')
|
|
352
352
|
job.write(f' if [ "$string2" != "SO" ]; then \n')
|
|
353
|
-
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
353
|
+
job.write(f' $vasp_std || echo "Erro no VASP em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
354
354
|
job.write(f' elif [ "$string2" == "SO" ]; then \n')
|
|
355
|
-
job.write(f' $vasp_ncl || echo "Erro no VASP em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
355
|
+
job.write(f' $vasp_ncl || echo "Erro no VASP em $dir0/$i/$j/$k" >> $dir0/error_log.txt \n')
|
|
356
356
|
job.write(f' fi \n')
|
|
357
|
-
job.write(f' python3 -m vasprocar \n')
|
|
357
|
+
job.write(f' python3 -m vasprocar || echo "Erro no VASPROCAR em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
358
358
|
job.write(f' #------------------- \n')
|
|
359
359
|
job.write(f' cp -r $dir0/$i/$j/$k/output/Potencial $dir0/$i/$j/Charge_transfer/Potencial_$k \n')
|
|
360
360
|
job.write(f' rm -r output \n')
|
|
@@ -374,10 +374,10 @@ job.write(f' fi \n')
|
|
|
374
374
|
job.write(f' done \n')
|
|
375
375
|
job.write(f' #------------- \n')
|
|
376
376
|
job.write(f' cd $dir0/$i/$j \n')
|
|
377
|
-
job.write(f' python3 charge_transfer.py \n')
|
|
377
|
+
job.write(f' python3 charge_transfer.py || echo "Erro no charge_transfer.py em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
378
378
|
job.write(f' #----------------------------- \n')
|
|
379
379
|
job.write(f' cd $dir0/$i/$j/Charge_transfer \n')
|
|
380
|
-
job.write(f' python3 -m vasprocar \n')
|
|
380
|
+
job.write(f' python3 -m vasprocar || echo "Erro no VASPROCAR em $dir0/$i/$j" >> $dir0/error_log.txt \n')
|
|
381
381
|
job.write(f' cp -r $dir0/$i/$j/Charge_transfer/output/Charge $dir0/$i/$j/Charge_transfer/Charge_transfer_plot2D \n')
|
|
382
382
|
job.write(f' mv CHGCAR_Charge_Transfer.vasp CHGCAR_Charge_Transfer \n')
|
|
383
383
|
job.write(f' # rm -r output CHGCAR_H* CHGCAR_m* \n')
|
|
@@ -394,12 +394,12 @@ job.write(f' fi \n')
|
|
|
394
394
|
job.write(f' fi \n')
|
|
395
395
|
job.write(f' done \n')
|
|
396
396
|
job.write(f' cd $dir0/$i \n')
|
|
397
|
-
job.write(f' python3 output.py \n')
|
|
398
|
-
job.write(f' python3 BZ_2D.py \n')
|
|
399
|
-
job.write(f' python3 lattice_plot3d.py \n')
|
|
397
|
+
job.write(f' python3 output.py || echo "Erro no output.py em $dir0/$i" >> $dir0/error_log.txt \n')
|
|
398
|
+
job.write(f' python3 BZ_2D.py || echo "Erro no BZ_2D.py em $dir0/$i" >> $dir0/error_log.txt \n')
|
|
399
|
+
job.write(f' python3 lattice_plot3d.py || echo "Erro no lattice_plot3d.py em $dir0/$i" >> $dir0/error_log.txt \n')
|
|
400
400
|
job.write(f' #------------------------ \n')
|
|
401
401
|
job.write(f' cp -r $dir0/$i/output/POSCAR $dir0/$i/output/POSCAR.info \n')
|
|
402
|
-
job.write(f' python3 data-base_json.py \n')
|
|
402
|
+
job.write(f' python3 data-base_json.py || echo "Erro no data-base_json.py em $dir0/$i" >> $dir0/error_log.txt \n')
|
|
403
403
|
job.write(f' #------------------------ \n')
|
|
404
404
|
job.write(f' if [ -d "$dir0/completed" ]; then \n')
|
|
405
405
|
job.write(f' mv $dir0/$i $dir0/completed/$i \n')
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
{samba_ilum-1.0.0.467 → samba_ilum-1.0.0.468}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input
RENAMED
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|