SAMBA-ilum 1.0.0.446__tar.gz → 1.0.0.448__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (66) hide show
  1. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/PKG-INFO +1 -1
  2. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
  3. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/__main__.py +1 -1
  4. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/HeteroStructure_Generator.py +22 -14
  5. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/setup.py +1 -1
  6. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/LICENSE.txt +0 -0
  7. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/README.md +0 -0
  8. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/SOURCES.txt +0 -0
  9. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
  10. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
  11. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/requires.txt +0 -0
  12. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/SAMBA_ilum.egg-info/top_level.txt +0 -0
  13. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/__init__.py +0 -0
  14. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/BZ_2D.py +0 -0
  15. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/HeteroStructure_Generator_backup.py +0 -0
  16. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/HeteroStructure_Generator_backup_2.py +0 -0
  17. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
  18. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
  19. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
  20. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
  21. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
  22. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
  23. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
  24. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
  25. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
  26. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
  27. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
  28. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
  29. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
  30. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +0 -0
  31. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
  32. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
  33. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
  34. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
  35. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
  36. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
  37. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
  38. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
  39. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
  40. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/_info_pseudo.py +0 -0
  41. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/a-scan.py +0 -0
  42. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/a-scan_analysis.py +0 -0
  43. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/bader +0 -0
  44. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/bader_poscar.py +0 -0
  45. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/bader_update.py +0 -0
  46. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/charge_transfer.py +0 -0
  47. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/chgsum.pl +0 -0
  48. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/contcar_update.py +0 -0
  49. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/data-base_json.py +0 -0
  50. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/data-base_union.py +0 -0
  51. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/energy_scan.py +0 -0
  52. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/hubbard_correction.py +0 -0
  53. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/job.py +0 -0
  54. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/kpoints.py +0 -0
  55. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/lattice_plot3d.py +0 -0
  56. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/make_files.py +0 -0
  57. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/output.py +0 -0
  58. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/potcar.py +0 -0
  59. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/vdW_DF.py +0 -0
  60. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/xy-scan.py +0 -0
  61. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/xy-scan_analysis.py +0 -0
  62. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/xyz-scan.py +0 -0
  63. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/xyz-scan_analysis.py +0 -0
  64. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/z-scan.py +0 -0
  65. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/samba_ilum/src/z-scan_analysis.py +0 -0
  66. {samba_ilum-1.0.0.446 → samba_ilum-1.0.0.448}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.1
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  Name: SAMBA_ilum
3
- Version: 1.0.0.446
3
+ Version: 1.0.0.448
4
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  Summary: ...
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  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
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  Name: SAMBA_ilum
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- Version: 1.0.0.446
3
+ Version: 1.0.0.448
4
4
  Summary: ...
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  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -16,7 +16,7 @@ dir_samba = os.path.dirname(os.path.realpath(__file__))
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  print(f'{dir_samba}')
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  #--------------------
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- version = '1.0.0.446'
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+ version = '1.0.0.448'
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  print(" ")
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  print("=============================================================")
@@ -1350,12 +1350,11 @@ if (n_test == 1):
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  if (n_Lattice == 3):
1351
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  cos = np.cos(angle2); sin = np.sin(angle2)
1352
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  matriz_rotacao = np.array([[cos, -sin], [sin, cos]])
1353
- temp_A3 = matriz_rotacao @ A3 # Rotacionando o vetor A3 por angle0, para coincidir com a região do vetor A1
1353
+ temp_A3 = matriz_rotacao @ A3 # Rotacionando o vetor A3 por angle2, para coincidir com a região do vetor A1
1354
1354
  #----------------------------
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  cos = np.cos(angle_3); sin = np.sin(angle_3)
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  matriz_rotacao = np.array([[cos, -sin], [sin, cos]])
1357
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  temp_B3 = matriz_rotacao @ ((temp_A3/mod_A3)*mod_B3) # Usando a direção do vetor A3 rotacionado para criar B3 rotacionado
1358
- #---------------------------------------------------
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1360
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  #-------------------------------------------------------
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  # Vetores que definem a célula intermediária -----------
@@ -1371,9 +1370,21 @@ if (n_test == 1):
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  Area_int = np.linalg.norm(np.cross(A_int, B_int))
1372
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  angle_int = np.arccos(np.dot(A_int,B_int)/(mod_A_int*mod_B_int))
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1372
 
1374
- #------------------------------------------------------------
1375
- # Estimando a deformação e mismatch sofrido pelas células ---
1376
- #------------------------------------------------------------
1373
+ #------------------------------------------------------------------------------------------------------------------------
1374
+ # Utilização de vetores temporários (A,B) a fim de estimar a deformação sofrida pelas células originais -----------------
1375
+ #------------------------------------------------------------------------------------------------------------------------
1376
+ A4 = (A1/mod_A1)*mod_A_int
1377
+ A5 = (A2/mod_A2)*mod_A_int
1378
+ if (n_Lattice == 3): A6 = (A3/mod_A3)*mod_A_int
1379
+ #-----------------------------------------------
1380
+ cos = np.cos(angle_int); sin = np.sin(angle_int)
1381
+ matriz_rotacao = np.array([[cos, -sin], [sin, cos]])
1382
+ #--------------------------------------------
1383
+ B4 = matriz_rotacao @ ((A1/mod_A1)*mod_B_int)
1384
+ B5 = matriz_rotacao @ ((A2/mod_A2)*mod_B_int)
1385
+ if (n_Lattice == 3):
1386
+ B6 = matriz_rotacao @ ((A3/mod_A3)*mod_B_int)
1387
+ #--------------------------------------------------------------------
1377
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  var_A1 = ((mod_A_int -mod_A1)/mod_A1)*100; var_A1 = round(var_A1, 4)
1378
1389
  var_B1 = ((mod_B_int -mod_B1)/mod_B1)*100; var_B1 = round(var_B1, 4)
1379
1390
  var_A2 = ((mod_A_int -mod_A2)/mod_A2)*100; var_A2 = round(var_A2, 4)
@@ -1431,16 +1442,13 @@ if (n_test == 1):
1431
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  # Obtenção das Matrizes de Strain para cada rede =====
1432
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  #=====================================================
1433
1444
  Lattice_A = [ [A1[0], A1[1]], [B1[0], B1[1]] ]
1434
- Lattice_B = [ [temp_A2[0], temp_A2[1]], [temp_B2[0], temp_B2[1]] ]
1435
- if (n_Lattice == 3):
1436
- Lattice_C = [ [temp_A3[0], temp_A3[1]], [temp_B3[0], temp_B3[1]] ]
1437
- #---------------------------------------------
1438
- Lattice_D = [ [A_int[0], A_int[1]], [B_int[0], B_int[1]] ]
1439
- Lattice_E = Lattice_D
1440
- if (n_Lattice == 3):
1441
- Lattice_F = Lattice_D
1442
- #---------------------------------------
1445
+ Lattice_B = [ [A2[0], A2[1]], [B2[0], B2[1]] ]
1446
+ if (n_Lattice == 3): Lattice_C = [ [A3[0], A3[1]], [B3[0], B3[1]] ]
1447
+ Lattice_D = [ [A4[0], A4[1]], [B4[0], B4[1]] ]
1448
+ Lattice_E = [ [A5[0], A5[1]], [B5[0], B5[1]] ]
1449
+ if (n_Lattice == 3): Lattice_F = [ [A6[0], A6[1]], [B6[0], B6[1]] ]
1443
1450
  I = np.eye(2)
1451
+ #---------------------------------------
1444
1452
  Lattice_A_inv = np.linalg.inv(Lattice_A)
1445
1453
  F_A = np.dot(Lattice_D, Lattice_A_inv)
1446
1454
  MStrain_A = 0.5 * (np.dot(F_A.T, F_A) - I)
@@ -6,7 +6,7 @@ import json
6
6
 
7
7
  setup(
8
8
  name = "SAMBA_ilum",
9
- version = "1.0.0.446",
9
+ version = "1.0.0.448",
10
10
  entry_points={'console_scripts': ['samba_ilum = samba_ilum:main']},
11
11
  description = "...",
12
12
  author = "Augusto de Lelis Araujo",
File without changes
File without changes