SAMBA-ilum 1.0.0.435__tar.gz → 1.0.0.436__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (65) hide show
  1. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/PKG-INFO +1 -1
  2. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
  3. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/__main__.py +1 -1
  4. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/bader_poscar.py +1 -9
  5. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/make_files.py +12 -6
  6. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/setup.py +1 -1
  7. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/LICENSE.txt +0 -0
  8. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/README.md +0 -0
  9. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/SOURCES.txt +0 -0
  10. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
  11. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
  12. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/requires.txt +0 -0
  13. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/SAMBA_ilum.egg-info/top_level.txt +0 -0
  14. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/__init__.py +0 -0
  15. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/BZ_2D.py +0 -0
  16. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/HeteroStructure_Generator.py +0 -0
  17. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/HeteroStructure_Generator_backup.py +0 -0
  18. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
  19. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
  20. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
  21. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
  22. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
  23. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
  24. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
  25. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
  26. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
  27. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
  28. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
  29. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
  30. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
  31. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +0 -0
  32. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
  33. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
  34. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
  35. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
  36. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
  37. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
  38. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
  39. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
  40. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
  41. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/_info_pseudo.py +0 -0
  42. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/a-scan.py +0 -0
  43. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/a-scan_analysis.py +0 -0
  44. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/bader +0 -0
  45. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/bader_update.py +0 -0
  46. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/charge_transfer.py +0 -0
  47. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/chgsum.pl +0 -0
  48. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/contcar_update.py +0 -0
  49. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/data-base_json.py +0 -0
  50. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/data-base_union.py +0 -0
  51. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/energy_scan.py +0 -0
  52. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/hubbard_correction.py +0 -0
  53. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/job.py +0 -0
  54. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/kpoints.py +0 -0
  55. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/lattice_plot3d.py +0 -0
  56. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/output.py +0 -0
  57. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/potcar.py +0 -0
  58. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/vdW_DF.py +0 -0
  59. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/xy-scan.py +0 -0
  60. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/xy-scan_analysis.py +0 -0
  61. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/xyz-scan.py +0 -0
  62. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/xyz-scan_analysis.py +0 -0
  63. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/z-scan.py +0 -0
  64. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/samba_ilum/src/z-scan_analysis.py +0 -0
  65. {samba_ilum-1.0.0.435 → samba_ilum-1.0.0.436}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA_ilum
3
- Version: 1.0.0.435
3
+ Version: 1.0.0.436
4
4
  Summary: ...
5
5
  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA_ilum
3
- Version: 1.0.0.435
3
+ Version: 1.0.0.436
4
4
  Summary: ...
5
5
  Author: Augusto de Lelis Araujo
6
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  Author-email: augusto-lelis@outlook.com
@@ -16,7 +16,7 @@ dir_samba = os.path.dirname(os.path.realpath(__file__))
16
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  print(f'{dir_samba}')
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  #--------------------
18
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19
- version = '1.0.0.435'
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+ version = '1.0.0.436'
20
20
 
21
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  print(" ")
22
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  print("=============================================================")
@@ -49,20 +49,12 @@ os.mkdir(dir_task + '/HeteroStructure')
49
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  os.mkdir(dir_task + '/HeteroStructure' + '/inputs')
50
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  shutil.copyfile(dir_codes + '/INPUTS/inputs_VASProcar/input.vasprocar.locpot', dir_task + '/HeteroStructure' + '/inputs' + '/input.vasprocar.locpot')
51
51
  shutil.copyfile(dir_task + '/POSCAR', dir_task + '/HeteroStructure' + '/POSCAR')
52
- if (U_correction = 1):
53
- shutil.copyfile(dir_codes + '/hubbard_correction.py', dir_task + '/HeteroStructure' + '/hubbard_correction.py')
54
- exec(open(dir_task + '/HeteroStructure' + '/hubbard_correction.py').read())
55
- shutil.rmtree(dir_task + '/HeteroStructure' + '/hubbard_correction.py')
56
52
 
57
53
  for m in range(n_Lattice):
58
54
  os.mkdir(dir_task + '/material_' + str(m+1))
59
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  os.mkdir(dir_task + '/material_' + str(m+1) + '/inputs')
60
56
  shutil.copyfile(dir_codes + '/INPUTS/inputs_VASProcar/input.vasprocar.locpot', dir_task + '/material_' + str(m+1) + '/inputs/input.vasprocar.locpot')
61
- if (U_correction = 1):
62
- shutil.copyfile(dir_codes + '/hubbard_correction.py', dir_task + '/material_' + str(m+1) + '/hubbard_correction.py')
63
- exec(open(dir_task + '/material_' + str(m+1) + '/hubbard_correction.py').read())
64
- shutil.rmtree(dir_task + '/material_' + str(m+1) + '/hubbard_correction.py')
65
- #------------------------------------------------------------------------------
57
+ #----------------------------------------------------------------------------------------------------------------------------------------------------
66
58
  poscar = open(dir_task + '/POSCAR', 'r')
67
59
  poscar_new = open(dir_task + '/material_' + str(m+1) + '/POSCAR', 'w')
68
60
  #---------------------------------------------------------------------
@@ -183,11 +183,7 @@ for i in range(len(files)):
183
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  shutil.copyfile(dir_files + '/Structures' + '/' + files[i], dir_task + '/POSCAR')
184
184
  shutil.copyfile(dir_files + '/Structures' + '/' + files[i], dir_task + '/CONTCAR')
185
185
  shutil.copyfile(dir_codes + '/contcar_update.py', dir_task + '/contcar_update.py')
186
- if (U_correction = 1 and task[j][:5] == 'bader' != 'bader'):
187
- shutil.copyfile(dir_codes + '/hubbard_correction.py', dir_task + '/hubbard_correction.py')
188
- exec(open(dir_task + '/hubbard_correction.py').read())
189
- shutil.rmtree(dir_task + '/hubbard_correction.py')
190
- #=========================================================
186
+ #=================================================================================
191
187
  if task[j] in ['a-scan', 'z-scan', 'xy-scan', 'xyz-scan']:
192
188
  shutil.copyfile(dir_codes + '/' + task[j] + '_analysis.py', dir_task + '/' + task[j] + '_analysis.py')
193
189
  shutil.copyfile(dir_codes + '/' + task[j] + '.py', dir_task + '/' + task[j] + '.py')
@@ -551,7 +547,12 @@ for i in range(len(files)):
551
547
  content = content.replace('NSW = 999', 'NSW = 0')
552
548
  with open(dir_output, "w") as file: file.write(content)
553
549
  #------------------------------------------------------------
554
-
550
+ if (U_correction == 1):
551
+ if (task[j] != 'a-scan' and task[j] != 'z-scan' and task[j] != 'xy-scan' and task[j] != 'xyz-scan' and task[j] != 'relax'):
552
+ shutil.copyfile(dir_codes + '/hubbard_correction.py', dir_task + '/hubbard_correction.py')
553
+ exec(open(dir_task + '/hubbard_correction.py').read())
554
+ shutil.rmtree(dir_task + '/hubbard_correction.py')
555
+ #-------------------------------------------------------
555
556
 
556
557
  if (task[j][:5] == 'bader' and n_materials > 1):
557
558
  #--------------------------------------------------------------
@@ -616,6 +617,11 @@ for i in range(len(files)):
616
617
  content = content.replace('# KSPACING', 'KSPACING = ' + str(k_dens))
617
618
  content = content.replace('# KGAMMA', 'KGAMMA = ' + 'True')
618
619
  with open(dir_output, "w") as file: file.write(content)
620
+ #-------------------------------------------------------
621
+ if (U_correction == 1):
622
+ shutil.copyfile(dir_codes + '/hubbard_correction.py', dir_out + '/' + files[i] + '/' + task[j] + '/' + files2[k] + '/hubbard_correction.py')
623
+ exec(open(dir_out + '/' + files[i] + '/' + task[j] + '/' + files2[k] + '/hubbard_correction.py').read())
624
+ shutil.rmtree(dir_out + '/' + files[i] + '/' + task[j] + '/' + files2[k] + '/hubbard_correction.py')
619
625
  #----------------------------------------------------------------
620
626
  # os.remove(dir_out + '/' + files[i] + '/' + task[j] + '/POSCAR')
621
627
  #----------------------------------------------------------------
@@ -6,7 +6,7 @@ import json
6
6
 
7
7
  setup(
8
8
  name = "SAMBA_ilum",
9
- version = "1.0.0.435",
9
+ version = "1.0.0.436",
10
10
  entry_points={'console_scripts': ['samba_ilum = samba_ilum:main']},
11
11
  description = "...",
12
12
  author = "Augusto de Lelis Araujo",
File without changes
File without changes