SAMBA-ilum 1.0.0.384__tar.gz → 1.0.0.386__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (67) hide show
  1. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/PKG-INFO +1 -1
  2. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
  3. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/__main__.py +1 -1
  4. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/HeteroStructure_Generator.py +27 -19
  5. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +6 -2
  6. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/setup.py +1 -1
  7. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/LICENSE.txt +0 -0
  8. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/README.md +0 -0
  9. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/SOURCES.txt +0 -0
  10. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
  11. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
  12. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/requires.txt +0 -0
  13. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/top_level.txt +0 -0
  14. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/__init__.py +0 -0
  15. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
  16. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
  17. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
  18. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
  19. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
  20. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
  21. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
  22. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
  23. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
  24. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
  25. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
  26. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
  27. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
  28. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
  29. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
  30. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
  31. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
  32. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
  33. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
  34. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
  35. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
  36. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
  37. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/a-scan.py +0 -0
  38. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/a-scan_analysis.py +0 -0
  39. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/job.py +0 -0
  40. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/z-scan.py +0 -0
  41. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/z-scan_analysis.py +0 -0
  42. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/_info_pseudo.py +0 -0
  43. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/a-scan.py +0 -0
  44. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/a-scan_analysis.py +0 -0
  45. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader +0 -0
  46. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader_poscar.py +0 -0
  47. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader_update.py +0 -0
  48. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/charge_transfer.py +0 -0
  49. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/chgsum.pl +0 -0
  50. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/contcar_update.py +0 -0
  51. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/data-base_json.py +0 -0
  52. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/data-base_union.py +0 -0
  53. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/energy_scan.py +0 -0
  54. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/job.py +0 -0
  55. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/kpoints.py +0 -0
  56. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/lattice_plot3d.py +0 -0
  57. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/make_files.py +0 -0
  58. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/output.py +0 -0
  59. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/potcar.py +0 -0
  60. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/vdW_DF.py +0 -0
  61. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xy-scan.py +0 -0
  62. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xy-scan_analysis.py +0 -0
  63. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xyz-scan.py +0 -0
  64. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xyz-scan_analysis.py +0 -0
  65. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/z-scan.py +0 -0
  66. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/z-scan_analysis.py +0 -0
  67. {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/setup.cfg +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA_ilum
3
- Version: 1.0.0.384
3
+ Version: 1.0.0.386
4
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  Summary: ...
5
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  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: SAMBA-ilum
3
- Version: 1.0.0.384
3
+ Version: 1.0.0.386
4
4
  Summary: ...
5
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  Author: Augusto de Lelis Araujo
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  Author-email: augusto-lelis@outlook.com
@@ -16,7 +16,7 @@ dir_samba = os.path.dirname(os.path.realpath(__file__))
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  print(f'{dir_samba}')
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  #--------------------
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- version = '1.0.0.384'
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+ version = '1.0.0.386'
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21
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  print(" ")
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  print("=============================================================")
@@ -23,19 +23,19 @@ import os
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23
 
24
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  #----------------
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  mismatch_type = 0
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- #------------------------------------------
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- crit_mod_vector = float(crit_mod_vector)
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- crit_dist_lattice = float(crit_dist_lattice)
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- crit_angle_perc = float(crit_angle_perc)
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- crit_angle_diff = float(crit_angle_diff)
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- crit_area = float(crit_area)
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- #-----------------------------------------------------
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- if (crit_mod_vector <= 0.0): crit_mod_vector = 0.01
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- if (crit_dist_lattice <= 0.0): crit_dist_lattice = 0.01
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- if (crit_angle_perc <= 0.0): crit_angle_perc = 0.01
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- if (crit_angle_diff <= 0.0): crit_angle_diff = 0.01
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- if (crit_area <= 0.0): crit_area = 0.01
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- #-----------------------------------------------
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+ #---------------------------------------------
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+ crit_mod_vector = float(crit_mod_vector)
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+ crit_distorc_lattice = float(crit_distorc_lattice)
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+ crit_angle_perc = float(crit_angle_perc)
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+ crit_angle_diff = float(crit_angle_diff)
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+ crit_area = float(crit_area)
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+ #--------------------------------------------------------
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+ if (crit_mod_vector <= 0.0): crit_mod_vector = 0.01
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+ if (crit_distorc_lattice <= 0.0): crit_distorc_lattice = 0.01
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+ if (crit_angle_perc <= 0.0): crit_angle_perc = 0.01
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+ if (crit_angle_diff <= 0.0): crit_angle_diff = 0.01
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+ if (crit_area <= 0.0): crit_area = 0.01
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+ #--------------------------------------------------
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  #----------------------------------------------------------------------------------------------------------------------------------------------
@@ -1212,10 +1212,18 @@ if (n_test == 1):
1212
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  A = poscar3.readline().split(); A3 = np.array([ float(A[0])*param, float(A[1])*param ])
1213
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  B = poscar3.readline().split(); B3 = np.array([ float(B[0])*param, float(B[1])*param ])
1214
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  #-----------------------------------------------------------------------------------------
1215
- V1 = 0.5*A1 + 0.5*B1
1216
- V2 = 0.5*A2 + 0.5*B2
1217
- if (n_Lattice == 3): V3 = 0.5*A3 + 0.5*B3
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- #-----------------------------------------
1215
+ if (rot_angle_calc == 'center_cell'):
1216
+ V1 = 0.5*A1 + 0.5*B1; V2 = 0.5*A2 + 0.5*B2
1217
+ if (n_Lattice == 3): V3 = 0.5*A3 + 0.5*B3
1218
+ #-----------------------------------------
1219
+ if (rot_angle_calc == 'A1'):
1220
+ V1 = 0.5*A1; V2 = 0.5*A2
1221
+ if (n_Lattice == 3): V3 = 0.5*A3
1222
+ #--------------------------------
1223
+ if (rot_angle_calc == 'A2'):
1224
+ V1 = 0.5*B1; V2 = 0.5*B2
1225
+ if (n_Lattice == 3): V3 = 0.5*B3
1226
+ #-----------------------------------
1219
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  u = V1/np.linalg.norm(V1)
1220
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  v = V2/np.linalg.norm(V2)
1221
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  dot_product = np.dot(u, v)
@@ -1642,8 +1650,8 @@ if (n_test == 1):
1642
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  dist_1 = abs(var_A1 -var_B1)
1643
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  dist_2 = abs(var_A2 -var_B2)
1644
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  if (n_Lattice == 3): dist_3 = abs(var_A3 -var_B3)
1645
- #-------------------------------------------------------------------------------------------
1646
- if (dist_1 > crit_dist_lattice or dist_2 > crit_dist_lattice or dist_3 > crit_dist_lattice):
1653
+ #----------------------------------------------------------------------------------------------------
1654
+ if (dist_1 > crit_distorc_lattice or dist_2 > crit_distorc_lattice or dist_3 > crit_distorc_lattice):
1647
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  os.remove(diret2 + dir_temp_m + '/POSCAR_' + str(i+1) + '.vasp')
1648
1656
 
1649
1657
 
@@ -41,7 +41,7 @@ cell_fator = [10, 10, 1] # Fator de multiplicação da célula uni
41
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  # Observação: Valores muito elevados pode levar a lentidão excessiva do código.
42
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  #----------------------------------
43
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  crit_mod_vector = 3 # Variação perc. % do módulo entre os vetores (A e B) das redes: A1_com_A2 e B1_com_B2
44
- crit_dist_lattice = 3 # Variação perc. % do módulo entre os vetores (A e B) de uma mesma rede: A1_com_B1 e A2_com_B2
44
+ crit_distorc_lattice = 3 # Variação perc. % do módulo entre os vetores (A e B) de uma mesma rede: A1_com_B1 e A2_com_B2
45
45
  crit_angle_perc = 2 # Variação perc. % do ângulo formado entre o vetores (A e B) das redes: Theta1_com_Theta2
46
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  crit_angle_diff = 2 # Variação (em módulo) do ângulo em graus (º) formado entre o vetores (A e B) das redes: Theta1_com_Theta2
47
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  crit_area = 5 # Variação perc. % da área das redes que irão compor a Heteroestrutura: Area1_com_Area2
@@ -54,4 +54,8 @@ angle_min = 15.0 # Angulo minímo de abertura entre os vet
54
54
  angle_max = 165.0 # Angulo máximo de abertura entre os vetores A1 e A2
55
55
  #----------------------------------
56
56
  mismatch_type = 0 # Deformação aplicada: [0] Distribuida proporcionalmente entre os materiais, [1] Aplicado ao 2º e 3º Materiais
57
- #---------------------------------- # Observação: A opção [1] encontra-se não-funcional no momento (ajustes devem ser realizados no código)
57
+ # Observação: A opção [1] encontra-se não-funcional no momento (ajustes devem ser realizados no código)
58
+ #----------------------------------
59
+ rot_angle_calc = 'center_cell' # 'center_cell', 'A1' ou 'A2' Vetor com relação ao qual o ângulo de rotação entre os materiais é cálculado
60
+ #----------------------------------
61
+
@@ -6,7 +6,7 @@ import json
6
6
 
7
7
  setup(
8
8
  name = "SAMBA_ilum",
9
- version = "1.0.0.384",
9
+ version = "1.0.0.386",
10
10
  entry_points={'console_scripts': ['samba_ilum = samba_ilum:main']},
11
11
  description = "...",
12
12
  author = "Augusto de Lelis Araujo",
File without changes
File without changes