SAMBA-ilum 1.0.0.384__tar.gz → 1.0.0.386__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/PKG-INFO +1 -1
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/PKG-INFO +1 -1
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/__main__.py +1 -1
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/HeteroStructure_Generator.py +27 -19
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input +6 -2
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/setup.py +1 -1
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/LICENSE.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/README.md +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/SOURCES.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/dependency_links.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/entry_points.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/requires.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/SAMBA_ilum.egg-info/top_level.txt +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/__init__.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_a-scan +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bader +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bader.SO +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bands +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_bands.SO +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_dos +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_dos.SO +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_relax +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_scf +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_scf.SO +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_xy-scan +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_xyz-scan +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/INCAR_z-scan +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/SAMBA_WorkFlow.input +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.bands +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.chgcar +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.dos +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.location +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.locpot +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.orbitals +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/inputs_VASProcar/input.vasprocar.spin +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/vdw_kernel.bindat +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/a-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/a-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/job.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/z-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/OLD/z-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/_info_pseudo.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/a-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/a-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader_poscar.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/bader_update.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/charge_transfer.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/chgsum.pl +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/contcar_update.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/data-base_json.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/data-base_union.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/energy_scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/job.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/kpoints.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/lattice_plot3d.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/make_files.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/output.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/potcar.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/vdW_DF.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xy-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xy-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xyz-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/xyz-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/z-scan.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/z-scan_analysis.py +0 -0
- {SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/setup.cfg +0 -0
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#----------------
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mismatch_type = 0
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crit_mod_vector =
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crit_angle_perc =
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crit_angle_diff =
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crit_area =
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if (crit_mod_vector <= 0.0):
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if (
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if (crit_angle_perc <= 0.0):
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if (crit_angle_diff <= 0.0):
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if (crit_area <= 0.0):
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#---------------------------------------------
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crit_mod_vector = float(crit_mod_vector)
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crit_distorc_lattice = float(crit_distorc_lattice)
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crit_angle_perc = float(crit_angle_perc)
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crit_angle_diff = float(crit_angle_diff)
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crit_area = float(crit_area)
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#--------------------------------------------------------
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if (crit_mod_vector <= 0.0): crit_mod_vector = 0.01
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if (crit_distorc_lattice <= 0.0): crit_distorc_lattice = 0.01
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if (crit_angle_perc <= 0.0): crit_angle_perc = 0.01
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if (crit_angle_diff <= 0.0): crit_angle_diff = 0.01
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if (crit_area <= 0.0): crit_area = 0.01
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#--------------------------------------------------
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#----------------------------------------------------------------------------------------------------------------------------------------------
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A = poscar3.readline().split(); A3 = np.array([ float(A[0])*param, float(A[1])*param ])
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B = poscar3.readline().split(); B3 = np.array([ float(B[0])*param, float(B[1])*param ])
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#-----------------------------------------------------------------------------------------
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if (rot_angle_calc == 'center_cell'):
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V1 = 0.5*A1 + 0.5*B1; V2 = 0.5*A2 + 0.5*B2
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if (n_Lattice == 3): V3 = 0.5*A3 + 0.5*B3
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#-----------------------------------------
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if (rot_angle_calc == 'A1'):
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V1 = 0.5*A1; V2 = 0.5*A2
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if (n_Lattice == 3): V3 = 0.5*A3
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#--------------------------------
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if (rot_angle_calc == 'A2'):
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V1 = 0.5*B1; V2 = 0.5*B2
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if (n_Lattice == 3): V3 = 0.5*B3
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#-----------------------------------
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u = V1/np.linalg.norm(V1)
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v = V2/np.linalg.norm(V2)
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dot_product = np.dot(u, v)
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dist_1 = abs(var_A1 -var_B1)
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dist_2 = abs(var_A2 -var_B2)
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if (n_Lattice == 3): dist_3 = abs(var_A3 -var_B3)
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if (dist_1 >
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#----------------------------------------------------------------------------------------------------
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if (dist_1 > crit_distorc_lattice or dist_2 > crit_distorc_lattice or dist_3 > crit_distorc_lattice):
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os.remove(diret2 + dir_temp_m + '/POSCAR_' + str(i+1) + '.vasp')
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{SAMBA_ilum-1.0.0.384 → SAMBA_ilum-1.0.0.386}/samba_ilum/src/INPUTS/SAMBA_HeteroStructure.input
RENAMED
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# Observação: Valores muito elevados pode levar a lentidão excessiva do código.
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#----------------------------------
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crit_mod_vector = 3 # Variação perc. % do módulo entre os vetores (A e B) das redes: A1_com_A2 e B1_com_B2
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crit_distorc_lattice = 3 # Variação perc. % do módulo entre os vetores (A e B) de uma mesma rede: A1_com_B1 e A2_com_B2
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crit_angle_perc = 2 # Variação perc. % do ângulo formado entre o vetores (A e B) das redes: Theta1_com_Theta2
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crit_angle_diff = 2 # Variação (em módulo) do ângulo em graus (º) formado entre o vetores (A e B) das redes: Theta1_com_Theta2
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crit_area = 5 # Variação perc. % da área das redes que irão compor a Heteroestrutura: Area1_com_Area2
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angle_max = 165.0 # Angulo máximo de abertura entre os vetores A1 e A2
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#----------------------------------
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mismatch_type = 0 # Deformação aplicada: [0] Distribuida proporcionalmente entre os materiais, [1] Aplicado ao 2º e 3º Materiais
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# Observação: A opção [1] encontra-se não-funcional no momento (ajustes devem ser realizados no código)
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#----------------------------------
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rot_angle_calc = 'center_cell' # 'center_cell', 'A1' ou 'A2' Vetor com relação ao qual o ângulo de rotação entre os materiais é cálculado
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#----------------------------------
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