RDG-Networks 0.3.11__tar.gz → 0.3.12__tar.gz

rdg_networks-0.3.12/PKG-INFO

@@ -0,0 +1,141 @@
+Metadata-Version: 2.2
+Name: RDG-Networks
+Version: 0.3.12
+Summary: RDG Networks project
+Home-page: https://github.com/NiekMooij/RDG_networks
+Author: Niek Mooij
+Author-email: mooij.niek@gmail.com
+License: All Rights Reserved
+Classifier: Programming Language :: Python :: 3
+Classifier: Operating System :: OS Independent
+Description-Content-Type: text/markdown
+License-File: LICENSE.txt
+Requires-Dist: networkx
+Requires-Dist: numpy
+Requires-Dist: scipy
+Requires-Dist: shapely
+Requires-Dist: typing
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: description
+Dynamic: description-content-type
+Dynamic: home-page
+Dynamic: license
+Dynamic: requires-dist
+Dynamic: summary
+
+## Overview
+
+This Python package provides code regarding the RDG networks project.
+
+[![License](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT)
+[![Python Version](https://img.shields.io/badge/python-3.6%2B-blue.svg)](https://www.python.org/downloads/)
+
+## Table of Contents
+
+- [Features](#features)
+- [Installation](#installation)
+- [Usage](#usage)
+- [Configuration](#configuration)
+- [License](#license)
+- [Contact](#contact)
+
+## Features
+
+### No thickness
+- **generate_line_segments:** Function that determines the linesegments of a RDG network.
+- **generate_line_network:** Function that makes the underlying network of the linesegments.
+- **get_intersection_segments:** Function that determines the intersection segments of a RDG network.
+- **generate_line_segments_dynamic:** Function that determines the segments of a dynamic RDG network (with increasing linelengths in time).
+- **draw_segments:** Function that draws the segments.
+
+### Thickness
+- **generate_line_segments_thickness:** Generates segment network with thicknesses
+- **orientate_network:** Generates various rotated versions of the initial network.
+
+- **save_to_stl:** Saves the network as a stl file.
+- **save_to_json:** Saves data as a json file.
+- **load_from_json:** Loads data as a json file.
+
+## Installation
+You can install the package using pip:
+
+```bash
+pip install RDG-networks
+```
+
+## Usage
+### Output
+The main function is called *generate_line_segments_thickness* and outputs the following data:
+```python
+data_dict = {'segments_dict': segments_dict, 
+             'polygon_arr': polygon_arr, 
+             'segment_thickness_dict': segment_thickness_dict, 
+             'jammed': jammed,
+             'generated_config': generated_config}
+```
+- *segment_thickness_dict*: contains the generated network, represented by multiple polygons.
+- *segments_dict*: contains auxilliary information of the generated network.
+- *polygon_arr*: contains auxilliary information of the generated network.
+- *jammed*: A boolean indicating if the system is jammed.
+- *generated_config*: An array containing all nucleation points and orientations of the segments.
+
+### Code example
+```python
+import matplotlib.pyplot as plt
+import numpy as np
+import os
+import sys
+import random
+from RDG_networks.thickness.generate_line_segments_thickness import generate_line_segments_thickness
+from RDG_networks import save_to_stl
+from RDG_networks.save_data import save_to_json, load_from_json
+
+size = 15
+lamb0 = 0.2
+alpha = 0.52
+thickness_arr = [lamb0 * t**(-alpha) for t in range(1, size + 1)]
+box_size = 1
+angles = [random.random() * 2 * np.pi for _ in range(size)]
+
+# Generate initial structure with specified parameters
+data_dict = generate_line_segments_thickness(size=size, thickness_arr=thickness_arr, angles=angles, box_size=box_size)
+
+# Setup plot
+fig, ax1 = plt.subplots(nrows=1, ncols=1, figsize=(5, 5))
+
+segment_thickness_dict = data_dict['segment_thickness_dict']
+for key, segment in segment_thickness_dict.items():
+    segment.draw(ax1)
+    middle_segment = segment.middle_segment
+    if middle_segment:
+        middle_segment.draw(ax1)
+
+# Set plot limits and disable ticks
+ax1.set(xlim=(0, 1), ylim=(0, 1))
+ax1.set_xticks([])
+ax1.set_yticks([])
+
+# Save to STL and JSON files
+save_to_stl(segment_thickness_dict, thickness=0.2, name=os.path.join(sys.path[0], 'network.stl'), frame_thickness=0.1)
+file_path = os.path.join(sys.path[0], 'data.json')
+save_to_json(data_dict, file_path)
+data = load_from_json(file_path)
+
+# Display the plot
+plt.show()
+```
+
+## Configuration
+No specific configuration is required.
+
+## License
+All Rights Reserved
+
+The following code and its accompanying documentation are the property of Martijn (Niek) Mooij. All rights are reserved. No part of this code may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the author, except in the case of brief quotations embodied in critical reviews and certain other noncommercial uses permitted by copyright law. For permission requests, write to the author at mooij.niek@gmail.com.
+
+Copyright 2024 Niek Mooij
+
+## Contact
+You can contact me at mooij.niek@gmail.com for any questions or suggestions.

rdg_networks-0.3.12/RDG_Networks.egg-info/PKG-INFO

@@ -0,0 +1,141 @@
+Metadata-Version: 2.2
+Name: RDG-Networks
+Version: 0.3.12
+Summary: RDG Networks project
+Home-page: https://github.com/NiekMooij/RDG_networks
+Author: Niek Mooij
+Author-email: mooij.niek@gmail.com
+License: All Rights Reserved
+Classifier: Programming Language :: Python :: 3
+Classifier: Operating System :: OS Independent
+Description-Content-Type: text/markdown
+License-File: LICENSE.txt
+Requires-Dist: networkx
+Requires-Dist: numpy
+Requires-Dist: scipy
+Requires-Dist: shapely
+Requires-Dist: typing
+Dynamic: author
+Dynamic: author-email
+Dynamic: classifier
+Dynamic: description
+Dynamic: description-content-type
+Dynamic: home-page
+Dynamic: license
+Dynamic: requires-dist
+Dynamic: summary
+
+## Overview
+
+This Python package provides code regarding the RDG networks project.
+
+[![License](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT)
+[![Python Version](https://img.shields.io/badge/python-3.6%2B-blue.svg)](https://www.python.org/downloads/)
+
+## Table of Contents
+
+- [Features](#features)
+- [Installation](#installation)
+- [Usage](#usage)
+- [Configuration](#configuration)
+- [License](#license)
+- [Contact](#contact)
+
+## Features
+
+### No thickness
+- **generate_line_segments:** Function that determines the linesegments of a RDG network.
+- **generate_line_network:** Function that makes the underlying network of the linesegments.
+- **get_intersection_segments:** Function that determines the intersection segments of a RDG network.
+- **generate_line_segments_dynamic:** Function that determines the segments of a dynamic RDG network (with increasing linelengths in time).
+- **draw_segments:** Function that draws the segments.
+
+### Thickness
+- **generate_line_segments_thickness:** Generates segment network with thicknesses
+- **orientate_network:** Generates various rotated versions of the initial network.
+
+- **save_to_stl:** Saves the network as a stl file.
+- **save_to_json:** Saves data as a json file.
+- **load_from_json:** Loads data as a json file.
+
+## Installation
+You can install the package using pip:
+
+```bash
+pip install RDG-networks
+```
+
+## Usage
+### Output
+The main function is called *generate_line_segments_thickness* and outputs the following data:
+```python
+data_dict = {'segments_dict': segments_dict, 
+             'polygon_arr': polygon_arr, 
+             'segment_thickness_dict': segment_thickness_dict, 
+             'jammed': jammed,
+             'generated_config': generated_config}
+```
+- *segment_thickness_dict*: contains the generated network, represented by multiple polygons.
+- *segments_dict*: contains auxilliary information of the generated network.
+- *polygon_arr*: contains auxilliary information of the generated network.
+- *jammed*: A boolean indicating if the system is jammed.
+- *generated_config*: An array containing all nucleation points and orientations of the segments.
+
+### Code example
+```python
+import matplotlib.pyplot as plt
+import numpy as np
+import os
+import sys
+import random
+from RDG_networks.thickness.generate_line_segments_thickness import generate_line_segments_thickness
+from RDG_networks import save_to_stl
+from RDG_networks.save_data import save_to_json, load_from_json
+
+size = 15
+lamb0 = 0.2
+alpha = 0.52
+thickness_arr = [lamb0 * t**(-alpha) for t in range(1, size + 1)]
+box_size = 1
+angles = [random.random() * 2 * np.pi for _ in range(size)]
+
+# Generate initial structure with specified parameters
+data_dict = generate_line_segments_thickness(size=size, thickness_arr=thickness_arr, angles=angles, box_size=box_size)
+
+# Setup plot
+fig, ax1 = plt.subplots(nrows=1, ncols=1, figsize=(5, 5))
+
+segment_thickness_dict = data_dict['segment_thickness_dict']
+for key, segment in segment_thickness_dict.items():
+    segment.draw(ax1)
+    middle_segment = segment.middle_segment
+    if middle_segment:
+        middle_segment.draw(ax1)
+
+# Set plot limits and disable ticks
+ax1.set(xlim=(0, 1), ylim=(0, 1))
+ax1.set_xticks([])
+ax1.set_yticks([])
+
+# Save to STL and JSON files
+save_to_stl(segment_thickness_dict, thickness=0.2, name=os.path.join(sys.path[0], 'network.stl'), frame_thickness=0.1)
+file_path = os.path.join(sys.path[0], 'data.json')
+save_to_json(data_dict, file_path)
+data = load_from_json(file_path)
+
+# Display the plot
+plt.show()
+```
+
+## Configuration
+No specific configuration is required.
+
+## License
+All Rights Reserved
+
+The following code and its accompanying documentation are the property of Martijn (Niek) Mooij. All rights are reserved. No part of this code may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the author, except in the case of brief quotations embodied in critical reviews and certain other noncommercial uses permitted by copyright law. For permission requests, write to the author at mooij.niek@gmail.com.
+
+Copyright 2024 Niek Mooij
+
+## Contact
+You can contact me at mooij.niek@gmail.com for any questions or suggestions.

{rdg_networks-0.3.11 → rdg_networks-0.3.12}/RDG_Networks.egg-info/SOURCES.txt

@@ -17,11 +17,9 @@ RDG_networks/generate_line_segments_static.py
 RDG_networks/get_intersection_segments.py
 RDG_networks/sample_in_polygon.py
 RDG_networks/save_data.py
-RDG_networks/save_to_json.py
 RDG_networks/thickness/Classes.py
 RDG_networks/thickness/__init__.py
 RDG_networks/thickness/generate_line_segments_thickness.py
-RDG_networks/thickness/generate_line_segments_thickness_correct.py
 RDG_networks/thickness/generate_line_segments_thickness_static.py
 RDG_networks/thickness/orientate_network.py
 RDG_networks/thickness/sample_in_polygon.py

rdg_networks-0.3.12/README.md

@@ -0,0 +1,114 @@
+## Overview
+
+This Python package provides code regarding the RDG networks project.
+
+[![License](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT)
+[![Python Version](https://img.shields.io/badge/python-3.6%2B-blue.svg)](https://www.python.org/downloads/)
+
+## Table of Contents
+
+- [Features](#features)
+- [Installation](#installation)
+- [Usage](#usage)
+- [Configuration](#configuration)
+- [License](#license)
+- [Contact](#contact)
+
+## Features
+
+### No thickness
+- **generate_line_segments:** Function that determines the linesegments of a RDG network.
+- **generate_line_network:** Function that makes the underlying network of the linesegments.
+- **get_intersection_segments:** Function that determines the intersection segments of a RDG network.
+- **generate_line_segments_dynamic:** Function that determines the segments of a dynamic RDG network (with increasing linelengths in time).
+- **draw_segments:** Function that draws the segments.
+
+### Thickness
+- **generate_line_segments_thickness:** Generates segment network with thicknesses
+- **orientate_network:** Generates various rotated versions of the initial network.
+
+- **save_to_stl:** Saves the network as a stl file.
+- **save_to_json:** Saves data as a json file.
+- **load_from_json:** Loads data as a json file.
+
+## Installation
+You can install the package using pip:
+
+```bash
+pip install RDG-networks
+```
+
+## Usage
+### Output
+The main function is called *generate_line_segments_thickness* and outputs the following data:
+```python
+data_dict = {'segments_dict': segments_dict, 
+             'polygon_arr': polygon_arr, 
+             'segment_thickness_dict': segment_thickness_dict, 
+             'jammed': jammed,
+             'generated_config': generated_config}
+```
+- *segment_thickness_dict*: contains the generated network, represented by multiple polygons.
+- *segments_dict*: contains auxilliary information of the generated network.
+- *polygon_arr*: contains auxilliary information of the generated network.
+- *jammed*: A boolean indicating if the system is jammed.
+- *generated_config*: An array containing all nucleation points and orientations of the segments.
+
+### Code example
+```python
+import matplotlib.pyplot as plt
+import numpy as np
+import os
+import sys
+import random
+from RDG_networks.thickness.generate_line_segments_thickness import generate_line_segments_thickness
+from RDG_networks import save_to_stl
+from RDG_networks.save_data import save_to_json, load_from_json
+
+size = 15
+lamb0 = 0.2
+alpha = 0.52
+thickness_arr = [lamb0 * t**(-alpha) for t in range(1, size + 1)]
+box_size = 1
+angles = [random.random() * 2 * np.pi for _ in range(size)]
+
+# Generate initial structure with specified parameters
+data_dict = generate_line_segments_thickness(size=size, thickness_arr=thickness_arr, angles=angles, box_size=box_size)
+
+# Setup plot
+fig, ax1 = plt.subplots(nrows=1, ncols=1, figsize=(5, 5))
+
+segment_thickness_dict = data_dict['segment_thickness_dict']
+for key, segment in segment_thickness_dict.items():
+    segment.draw(ax1)
+    middle_segment = segment.middle_segment
+    if middle_segment:
+        middle_segment.draw(ax1)
+
+# Set plot limits and disable ticks
+ax1.set(xlim=(0, 1), ylim=(0, 1))
+ax1.set_xticks([])
+ax1.set_yticks([])
+
+# Save to STL and JSON files
+save_to_stl(segment_thickness_dict, thickness=0.2, name=os.path.join(sys.path[0], 'network.stl'), frame_thickness=0.1)
+file_path = os.path.join(sys.path[0], 'data.json')
+save_to_json(data_dict, file_path)
+data = load_from_json(file_path)
+
+# Display the plot
+plt.show()
+```
+
+## Configuration
+No specific configuration is required.
+
+## License
+All Rights Reserved
+
+The following code and its accompanying documentation are the property of Martijn (Niek) Mooij. All rights are reserved. No part of this code may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the author, except in the case of brief quotations embodied in critical reviews and certain other noncommercial uses permitted by copyright law. For permission requests, write to the author at mooij.niek@gmail.com.
+
+Copyright 2024 Niek Mooij
+
+## Contact
+You can contact me at mooij.niek@gmail.com for any questions or suggestions.

{rdg_networks-0.3.11 → rdg_networks-0.3.12}/setup.py

@@ -2,11 +2,12 @@ from setuptools import setup, find_packages
 
 setup(
     name='RDG-Networks',
-    version='0.3.11',
+    version='0.3.12',
     author='Niek Mooij',
     author_email='mooij.niek@gmail.com',
-    description='Most of the code from the RDG Networks project',
+    description='RDG Networks project',
     long_description=open('README.md').read(),
+    long_description_content_type='text/markdown',
     url='https://github.com/NiekMooij/RDG_networks',
     classifiers=[
             'Programming Language :: Python :: 3',

rdg_networks-0.3.11/PKG-INFO

@@ -1,72 +0,0 @@
-Metadata-Version: 2.2
-Name: RDG-Networks
-Version: 0.3.11
-Summary: Most of the code from the RDG Networks project
-Home-page: https://github.com/NiekMooij/RDG_networks
-Author: Niek Mooij
-Author-email: mooij.niek@gmail.com
-License: All Rights Reserved
-Classifier: Programming Language :: Python :: 3
-Classifier: Operating System :: OS Independent
-License-File: LICENSE.txt
-Requires-Dist: networkx
-Requires-Dist: numpy
-Requires-Dist: scipy
-Requires-Dist: shapely
-Requires-Dist: typing
-Dynamic: author
-Dynamic: author-email
-Dynamic: classifier
-Dynamic: description
-Dynamic: home-page
-Dynamic: license
-Dynamic: requires-dist
-Dynamic: summary
-
-## Overview
-
-This Python package provides code regarding the RDG networks project.
-
-[![License](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT)
-[![Python Version](https://img.shields.io/badge/python-3.6%2B-blue.svg)](https://www.python.org/downloads/)
-
-## Table of Contents
-
-- [Features](#features)
-- [Installation](#installation)
-- [Usage](#usage)
-- [Configuration](#configuration)
-- [License](#license)
-- [Contact](#contact)
-
-## Features
-
-- **generate_line_segments:** Function that determines the linesegments of a RDG network.
-- **generate_line_network:** Function that makes the underlying network of the linesegments.
-- **get_intersection_segments:** Function that determines the intersection segments of a RDG network.
-- **generate_line_segments_dynamic:** Function that determines the segments of a dynamic RDG network (with increasing linelengths in time).
-- **draw_segments:** Function that draws the segments.
-
-
-## Installation
-You can install the package using pip:
-
-```bash
-pip install RDG-networks
-```
-
-## Usage
-To use the package, import the relevant script from the functions folder based on the algorithm you'd like to apply.
-
-## Configuration
-No specific configuration is required.
-
-## License
-All Rights Reserved
-
-The following code and its accompanying documentation are the property of Martijn (Niek) Mooij. All rights are reserved. No part of this code may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the author, except in the case of brief quotations embodied in critical reviews and certain other noncommercial uses permitted by copyright law. For permission requests, write to the author at mooij.niek@gmail.com.
-
-Copyright 2024 Niek Mooij
-
-## Contact
-You can contact me at mooij.niek@gmail.com for any questions or suggestions.

rdg_networks-0.3.11/RDG_Networks.egg-info/PKG-INFO

@@ -1,72 +0,0 @@
-Metadata-Version: 2.2
-Name: RDG-Networks
-Version: 0.3.11
-Summary: Most of the code from the RDG Networks project
-Home-page: https://github.com/NiekMooij/RDG_networks
-Author: Niek Mooij
-Author-email: mooij.niek@gmail.com
-License: All Rights Reserved
-Classifier: Programming Language :: Python :: 3
-Classifier: Operating System :: OS Independent
-License-File: LICENSE.txt
-Requires-Dist: networkx
-Requires-Dist: numpy
-Requires-Dist: scipy
-Requires-Dist: shapely
-Requires-Dist: typing
-Dynamic: author
-Dynamic: author-email
-Dynamic: classifier
-Dynamic: description
-Dynamic: home-page
-Dynamic: license
-Dynamic: requires-dist
-Dynamic: summary
-
-## Overview
-
-This Python package provides code regarding the RDG networks project.
-
-[![License](https://img.shields.io/badge/license-MIT-blue.svg)](https://opensource.org/licenses/MIT)
-[![Python Version](https://img.shields.io/badge/python-3.6%2B-blue.svg)](https://www.python.org/downloads/)
-
-## Table of Contents
-
-- [Features](#features)
-- [Installation](#installation)
-- [Usage](#usage)
-- [Configuration](#configuration)
-- [License](#license)
-- [Contact](#contact)
-
-## Features
-
-- **generate_line_segments:** Function that determines the linesegments of a RDG network.
-- **generate_line_network:** Function that makes the underlying network of the linesegments.
-- **get_intersection_segments:** Function that determines the intersection segments of a RDG network.
-- **generate_line_segments_dynamic:** Function that determines the segments of a dynamic RDG network (with increasing linelengths in time).
-- **draw_segments:** Function that draws the segments.
-
-
-## Installation
-You can install the package using pip:
-
-```bash
-pip install RDG-networks
-```
-
-## Usage
-To use the package, import the relevant script from the functions folder based on the algorithm you'd like to apply.
-
-## Configuration
-No specific configuration is required.
-
-## License
-All Rights Reserved
-
-The following code and its accompanying documentation are the property of Martijn (Niek) Mooij. All rights are reserved. No part of this code may be reproduced, distributed, or transmitted in any form or by any means, including photocopying, recording, or other electronic or mechanical methods, without the prior written permission of the author, except in the case of brief quotations embodied in critical reviews and certain other noncommercial uses permitted by copyright law. For permission requests, write to the author at mooij.niek@gmail.com.
-
-Copyright 2024 Niek Mooij
-
-## Contact
-You can contact me at mooij.niek@gmail.com for any questions or suggestions.

rdg_networks-0.3.11/RDG_networks/save_to_json.py

@@ -1,14 +0,0 @@
-import json
-from .Classes import Line, LineSegment, Polygon
-
-def save_to_json(data_dict, file_path):
-    data_dict['segments_dict'] = {key: pol.to_dict() for key, pol in data_dict['segments_dict'].items()}
-    data_dict['segment_thickness_dict'] = {key: pol.to_dict() for key, pol in data_dict['segment_thickness_dict'].items()}
-
-    with open(file_path, 'w') as json_file:
-        json.dump(data_dict, json_file)
-
-def load_from_json(file_path):
-    with open(file_path, 'r') as file:
-        data = json.load(file)
-    return data