PyQUDA-Utils 0.10.7.dev1__tar.gz → 0.10.7.dev2__tar.gz

pyquda_utils-0.10.7.dev2/MANIFEST.in

@@ -0,0 +1 @@
+exclude tests/*

{pyquda_utils-0.10.7.dev1 → pyquda_utils-0.10.7.dev2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: PyQUDA-Utils
-Version: 0.10.7.dev1
+Version: 0.10.7.dev2
 Summary: Utility scripts based on PyQUDA
 Author-email: SaltyChiang <SaltyChiang@users.noreply.github.com>
 Maintainer-email: SaltyChiang <SaltyChiang@users.noreply.github.com>
@@ -42,6 +42,7 @@ Requires-Python: >=3.8
 Description-Content-Type: text/markdown
 License-File: LICENSE
 Requires-Dist: PyQUDA
+Requires-Dist: pycparser
 
 # PyQUDA
 

{pyquda_utils-0.10.7.dev1 → pyquda_utils-0.10.7.dev2}/PyQUDA_Utils.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: PyQUDA-Utils
-Version: 0.10.7.dev1
+Version: 0.10.7.dev2
 Summary: Utility scripts based on PyQUDA
 Author-email: SaltyChiang <SaltyChiang@users.noreply.github.com>
 Maintainer-email: SaltyChiang <SaltyChiang@users.noreply.github.com>
@@ -42,6 +42,7 @@ Requires-Python: >=3.8
 Description-Content-Type: text/markdown
 License-File: LICENSE
 Requires-Dist: PyQUDA
+Requires-Dist: pycparser
 
 # PyQUDA
 

pyquda_utils-0.10.7.dev2/PyQUDA_Utils.egg-info/SOURCES.txt

@@ -0,0 +1,40 @@
+LICENSE
+MANIFEST.in
+README.md
+pyproject.toml
+setup.py
+PyQUDA_Utils.egg-info/PKG-INFO
+PyQUDA_Utils.egg-info/SOURCES.txt
+PyQUDA_Utils.egg-info/dependency_links.txt
+PyQUDA_Utils.egg-info/requires.txt
+PyQUDA_Utils.egg-info/top_level.txt
+pyquda_io/__init__.py
+pyquda_io/_field_utils.py
+pyquda_io/_mpi_file.py
+pyquda_io/chroma.py
+pyquda_io/io_general.py
+pyquda_io/kyu.py
+pyquda_io/lime.py
+pyquda_io/milc.py
+pyquda_io/nersc.py
+pyquda_io/npy.py
+pyquda_io/openqcd.py
+pyquda_io/xqcd.py
+pyquda_plugins/__main__.py
+pyquda_plugins/plugin_pyx.py
+pyquda_plugins/pygwu/__init__.py
+pyquda_utils/__init__.py
+pyquda_utils/_version.py
+pyquda_utils/alg_remez.py
+pyquda_utils/convert.py
+pyquda_utils/core.py
+pyquda_utils/deprecated.py
+pyquda_utils/gamma.py
+pyquda_utils/gauge_nd_sun.py
+pyquda_utils/gpt.py
+pyquda_utils/hmc_param.py
+pyquda_utils/milc_rhmc_param.py
+pyquda_utils/phase.py
+pyquda_utils/quasi_axial_gauge_fixing.py
+pyquda_utils/source.py
+pyquda_utils/io/__init__.py

pyquda_utils-0.10.7.dev2/PyQUDA_Utils.egg-info/requires.txt

@@ -0,0 +1,2 @@
+PyQUDA
+pycparser

{pyquda_utils-0.10.7.dev1 → pyquda_utils-0.10.7.dev2}/pyproject.toml

@@ -1,19 +1,16 @@
 [build-system]
-requires = ["setuptools", "wheel", "Cython", "numpy"]
+requires = ["setuptools", "wheel"]
 
 [tool.setuptools.packages.find]
 include = ["pyquda_utils*", "pyquda_io*", "pyquda_plugins*"]
 
-[tool.setuptools.package-data]
-pyquda_plugins = ["*/*.pyi", "*/src/*.pxd", "*/src/*.pyx"]
-
 [tool.setuptools.dynamic]
 version = { attr = "pyquda_utils._version.__version__" }
 
 [project]
 dynamic = ["version"]
 name = "PyQUDA-Utils"
-dependencies = ["PyQUDA"]
+dependencies = ["PyQUDA", "pycparser"]
 requires-python = ">=3.8"
 authors = [
     { name = "SaltyChiang", email = "SaltyChiang@users.noreply.github.com" },

pyquda_utils-0.10.7.dev2/pyquda_plugins/__main__.py

@@ -0,0 +1,118 @@
+from argparse import ArgumentParser
+from distutils import log
+from distutils.core import Distribution
+import logging
+import os
+import shutil
+from setuptools import Extension
+
+from distutils.command.build_py import build_py
+from distutils.command.build_ext import build_ext
+from distutils.command.install_lib import install_lib
+import sys
+import tempfile
+
+logging.getLogger().setLevel(logging.INFO)
+logging.getLogger().addHandler(logging.StreamHandler(sys.stdout))
+
+from Cython.Build import cythonize
+import numpy
+
+
+def dynamic(lib, header, include_path, library_path):
+    from pyquda_plugins.plugin_pyx import Plugin
+
+    plugins_root = os.path.dirname(__file__)
+    plugin = Plugin(lib, header, include_path)
+    plugin.write(plugins_root)
+    source = os.path.join(plugins_root, f"py{lib}", "src", f"_py{lib}.pyx")
+    return cythonize(
+        [
+            Extension(
+                name=f"pyquda_plugins.py{lib}._py{lib}",
+                sources=[source],
+                include_dirs=[include_path, numpy.get_include()],
+                define_macros=[("NPY_NO_DEPRECATED_API", "NPY_1_7_API_VERSION")],
+                library_dirs=[library_path],
+                libraries=[lib],
+                extra_link_args=[f"-Wl,-rpath={library_path}"],
+                language="c",
+            )
+        ],
+        language_level=3,
+    )[0]
+
+
+def build_and_install(lib, module, inplace):
+    build_temp = tempfile.mkdtemp(prefix="pyquda_plugins_")
+    dist = Distribution(
+        {
+            "ext_modules": [module],
+            "packages": ["pyquda_plugins"],
+            "package_data": {"pyquda_plugins": ["*/*.pyi", "*/src/*.pyx", "*/src/*.pxd"]},
+            "script_name": "__main__",
+        }
+    )
+
+    log.info("running build_py")
+    _build_py = build_py(dist)
+    _build_py.build_lib = build_temp
+    _build_py.ensure_finalized()
+    _build_py.run()
+    log.info("running build_ext")
+    _build_ext = build_ext(dist)
+    _build_ext.build_temp = build_temp
+    _build_ext.inplace = inplace
+    _build_ext.ensure_finalized()
+    _build_ext.run()
+    if not inplace:
+        log.info("running install_lib")
+        _install_lib = install_lib(dist)
+        _install_lib.inplace = inplace
+        _install_lib.ensure_finalized()
+        _install_lib.run()
+
+    # if not inplace:
+    #     site_packages = sysconfig.get_path("purelib")
+    #     plugins_root = os.path.join(site_packages, "pyquda_plugins")
+    #     ext = cmd.get_outputs()
+    #     for src, module in zip(ext, module_list):
+    #         dst = "/tmp"
+    #         log.info(f"copying {src} -> {dst}")
+    #         # shutil.copy2(src, dst)
+
+    shutil.rmtree(build_temp)
+
+
+def main():
+    parser = ArgumentParser(prog="pyquda_plugins", description="PyQUDA plugins installer", epilog="")
+    parser.add_argument(
+        "-l",
+        "--lib",
+        required=True,
+    )
+    parser.add_argument(
+        "-i",
+        "--header",
+        required=True,
+    )
+    parser.add_argument(
+        "-L",
+        "--library_path",
+        required=True,
+    )
+    parser.add_argument(
+        "-I",
+        "--include_path",
+        required=True,
+    )
+    parser.add_argument(
+        "--inplace",
+        action="store_true",
+    )
+    args = parser.parse_args()
+    build_and_install(args.lib, dynamic(args.lib, args.header, args.include_path, args.library_path), args.inplace)
+
+
+if __name__ == "__main__":
+    main()

{pyquda_utils-0.10.7.dev1 → pyquda_utils-0.10.7.dev2/pyquda_plugins}/plugin_pyx.py

@@ -1,5 +1,4 @@
 import os
-import sys
 from typing import Dict, List, NamedTuple, Tuple
 
 _C_TO_PYTHON: Dict[str, str] = {
@@ -120,26 +119,14 @@ class FunctionMeta(NamedTuple):
 
 
 def parseHeader(header, include_path):
-    pyquda_root = os.path.join(os.path.dirname(__file__), "pyquda_core")
-    fake_libc_include = os.path.join(pyquda_root, "pycparser", "utils", "fake_libc_include")
-    assert os.path.exists(fake_libc_include), f"{fake_libc_include} not found"
     print(f"Building wrapper from {os.path.join(include_path, header)}")
-    sys.path.insert(1, os.path.join(pyquda_root, "pycparser"))
     try:
         from pycparser import parse_file, c_ast
     except ImportError or ModuleNotFoundError:
         from pyquda_core.pycparser.pycparser import parse_file, c_ast  # This is for the language server
-    sys.path.remove(os.path.join(pyquda_root, "pycparser"))
 
     ast = parse_file(
-        os.path.join(include_path, header),
-        use_cpp=True,
-        cpp_path="cc",
-        cpp_args=[
-            "-E",
-            Rf"-I{fake_libc_include}",
-            Rf"-I{include_path}",
-        ],
+        os.path.join(include_path, header), use_cpp=True, cpp_path="cc", cpp_args=["-E", Rf"-I{include_path}"]
     )
     funcs: List[FunctionMeta] = []
     for node in ast:
@@ -213,14 +200,11 @@ class Plugin:
             self.pylib_pyx += "\n" + c_func.pyx(self.lib)
             self.pylib_pyi += c_func.pyi()
 
-    def write(self, plugin_root: str):
-        if not os.path.exists(plugin_root):
-            os.mkdir(plugin_root)
-        if not os.path.exists(os.path.join(plugin_root, "src")):
-            os.mkdir(os.path.join(plugin_root, "src"))
-        with open(os.path.join(plugin_root, "src", f"{self.lib}.pxd"), "w") as f:
+    def write(self, plugins_root: str):
+        os.makedirs(os.path.join(plugins_root, f"py{self.lib}", "src"), exist_ok=True)
+        with open(os.path.join(plugins_root, f"py{self.lib}", "src", f"{self.lib}.pxd"), "w") as f:
             f.write(self.lib_pxd)
-        with open(os.path.join(plugin_root, "src", f"py{self.lib}.pyx"), "w") as f:
+        with open(os.path.join(plugins_root, f"py{self.lib}", "src", f"_py{self.lib}.pyx"), "w") as f:
             f.write(self.pylib_pyx)
-        with open(os.path.join(plugin_root, f"py{self.lib}.pyi"), "w") as f:
+        with open(os.path.join(plugins_root, f"py{self.lib}", f"_py{self.lib}.pyi"), "w") as f:
             f.write(self.pylib_pyi)

{pyquda_utils-0.10.7.dev1 → pyquda_utils-0.10.7.dev2}/pyquda_plugins/pygwu/__init__.py

@@ -6,7 +6,7 @@ import numpy as np
 
 from pyquda_comm import initGrid, initDevice, getLogger, setGridMap, readMPIFile, readMPIFileInChunks
 from pyquda_comm.field import LatticeInfo, LatticeGauge, LatticeFermion, MultiLatticeFermion, evenodd
-from . import pygwu as gwu
+from . import _pygwu as gwu
 
 setGridMap("TZYX_FASTEST")
 

pyquda_utils-0.10.7.dev2/pyquda_utils/_version.py

@@ -0,0 +1 @@
+__version__ = "0.10.7.dev2"

pyquda_utils-0.10.7.dev2/setup.py

@@ -0,0 +1,16 @@
+import os
+import sys
+from setuptools import setup
+
+
+if "egg_info" in sys.argv or "dist_info" in sys.argv or "sdist" in sys.argv:
+    describe = os.popen("git describe --tags", "r").read().strip()
+    if describe != "":
+        if "-" in describe:
+            tag, post, _ = describe.split("-")
+        else:
+            tag, post = describe, 0
+        with open(os.path.join(os.path.dirname(__file__), "pyquda_utils", "_version.py"), "w") as f:
+            f.write(f'__version__ = "{tag[1:]}.dev{post}"\n')
+
+setup()

pyquda_utils-0.10.7.dev1/MANIFEST.in

@@ -1,6 +0,0 @@
-exclude tests/*
-
-include plugin_pyx.py
-include pyquda_core/pycparser/LICENSE
-recursive-include pyquda_core/pycparser/pycparser *.py *.cfg LICENSE
-recursive-include pyquda_core/pycparser/utils/fake_libc_include *.h

pyquda_utils-0.10.7.dev1/PyQUDA_Utils.egg-info/SOURCES.txt

@@ -1,186 +0,0 @@
-LICENSE
-MANIFEST.in
-README.md
-plugin_pyx.py
-pyproject.toml
-setup.py
-PyQUDA_Utils.egg-info/PKG-INFO
-PyQUDA_Utils.egg-info/SOURCES.txt
-PyQUDA_Utils.egg-info/dependency_links.txt
-PyQUDA_Utils.egg-info/requires.txt
-PyQUDA_Utils.egg-info/top_level.txt
-pyquda_core/pycparser/LICENSE
-pyquda_core/pycparser/pycparser/__init__.py
-pyquda_core/pycparser/pycparser/_ast_gen.py
-pyquda_core/pycparser/pycparser/_build_tables.py
-pyquda_core/pycparser/pycparser/_c_ast.cfg
-pyquda_core/pycparser/pycparser/ast_transforms.py
-pyquda_core/pycparser/pycparser/c_ast.py
-pyquda_core/pycparser/pycparser/c_generator.py
-pyquda_core/pycparser/pycparser/c_lexer.py
-pyquda_core/pycparser/pycparser/c_parser.py
-pyquda_core/pycparser/pycparser/plyparser.py
-pyquda_core/pycparser/pycparser/ply/LICENSE
-pyquda_core/pycparser/pycparser/ply/__init__.py
-pyquda_core/pycparser/pycparser/ply/cpp.py
-pyquda_core/pycparser/pycparser/ply/ctokens.py
-pyquda_core/pycparser/pycparser/ply/lex.py
-pyquda_core/pycparser/pycparser/ply/yacc.py
-pyquda_core/pycparser/pycparser/ply/ygen.py
-pyquda_core/pycparser/utils/fake_libc_include/_ansi.h
-pyquda_core/pycparser/utils/fake_libc_include/_fake_defines.h
-pyquda_core/pycparser/utils/fake_libc_include/_fake_typedefs.h
-pyquda_core/pycparser/utils/fake_libc_include/_syslist.h
-pyquda_core/pycparser/utils/fake_libc_include/aio.h
-pyquda_core/pycparser/utils/fake_libc_include/alloca.h
-pyquda_core/pycparser/utils/fake_libc_include/ar.h
-pyquda_core/pycparser/utils/fake_libc_include/argz.h
-pyquda_core/pycparser/utils/fake_libc_include/assert.h
-pyquda_core/pycparser/utils/fake_libc_include/complex.h
-pyquda_core/pycparser/utils/fake_libc_include/cpio.h
-pyquda_core/pycparser/utils/fake_libc_include/ctype.h
-pyquda_core/pycparser/utils/fake_libc_include/dirent.h
-pyquda_core/pycparser/utils/fake_libc_include/dlfcn.h
-pyquda_core/pycparser/utils/fake_libc_include/emmintrin.h
-pyquda_core/pycparser/utils/fake_libc_include/endian.h
-pyquda_core/pycparser/utils/fake_libc_include/envz.h
-pyquda_core/pycparser/utils/fake_libc_include/errno.h
-pyquda_core/pycparser/utils/fake_libc_include/fastmath.h
-pyquda_core/pycparser/utils/fake_libc_include/fcntl.h
-pyquda_core/pycparser/utils/fake_libc_include/features.h
-pyquda_core/pycparser/utils/fake_libc_include/fenv.h
-pyquda_core/pycparser/utils/fake_libc_include/float.h
-pyquda_core/pycparser/utils/fake_libc_include/fmtmsg.h
-pyquda_core/pycparser/utils/fake_libc_include/fnmatch.h
-pyquda_core/pycparser/utils/fake_libc_include/ftw.h
-pyquda_core/pycparser/utils/fake_libc_include/getopt.h
-pyquda_core/pycparser/utils/fake_libc_include/glob.h
-pyquda_core/pycparser/utils/fake_libc_include/grp.h
-pyquda_core/pycparser/utils/fake_libc_include/iconv.h
-pyquda_core/pycparser/utils/fake_libc_include/ieeefp.h
-pyquda_core/pycparser/utils/fake_libc_include/immintrin.h
-pyquda_core/pycparser/utils/fake_libc_include/inttypes.h
-pyquda_core/pycparser/utils/fake_libc_include/iso646.h
-pyquda_core/pycparser/utils/fake_libc_include/langinfo.h
-pyquda_core/pycparser/utils/fake_libc_include/libgen.h
-pyquda_core/pycparser/utils/fake_libc_include/libintl.h
-pyquda_core/pycparser/utils/fake_libc_include/limits.h
-pyquda_core/pycparser/utils/fake_libc_include/locale.h
-pyquda_core/pycparser/utils/fake_libc_include/malloc.h
-pyquda_core/pycparser/utils/fake_libc_include/math.h
-pyquda_core/pycparser/utils/fake_libc_include/monetary.h
-pyquda_core/pycparser/utils/fake_libc_include/mqueue.h
-pyquda_core/pycparser/utils/fake_libc_include/ndbm.h
-pyquda_core/pycparser/utils/fake_libc_include/netdb.h
-pyquda_core/pycparser/utils/fake_libc_include/newlib.h
-pyquda_core/pycparser/utils/fake_libc_include/nl_types.h
-pyquda_core/pycparser/utils/fake_libc_include/paths.h
-pyquda_core/pycparser/utils/fake_libc_include/poll.h
-pyquda_core/pycparser/utils/fake_libc_include/process.h
-pyquda_core/pycparser/utils/fake_libc_include/pthread.h
-pyquda_core/pycparser/utils/fake_libc_include/pwd.h
-pyquda_core/pycparser/utils/fake_libc_include/reent.h
-pyquda_core/pycparser/utils/fake_libc_include/regdef.h
-pyquda_core/pycparser/utils/fake_libc_include/regex.h
-pyquda_core/pycparser/utils/fake_libc_include/sched.h
-pyquda_core/pycparser/utils/fake_libc_include/search.h
-pyquda_core/pycparser/utils/fake_libc_include/semaphore.h
-pyquda_core/pycparser/utils/fake_libc_include/setjmp.h
-pyquda_core/pycparser/utils/fake_libc_include/signal.h
-pyquda_core/pycparser/utils/fake_libc_include/smmintrin.h
-pyquda_core/pycparser/utils/fake_libc_include/spawn.h
-pyquda_core/pycparser/utils/fake_libc_include/stdalign.h
-pyquda_core/pycparser/utils/fake_libc_include/stdarg.h
-pyquda_core/pycparser/utils/fake_libc_include/stdatomic.h
-pyquda_core/pycparser/utils/fake_libc_include/stdbool.h
-pyquda_core/pycparser/utils/fake_libc_include/stddef.h
-pyquda_core/pycparser/utils/fake_libc_include/stdint.h
-pyquda_core/pycparser/utils/fake_libc_include/stdio.h
-pyquda_core/pycparser/utils/fake_libc_include/stdlib.h
-pyquda_core/pycparser/utils/fake_libc_include/stdnoreturn.h
-pyquda_core/pycparser/utils/fake_libc_include/string.h
-pyquda_core/pycparser/utils/fake_libc_include/strings.h
-pyquda_core/pycparser/utils/fake_libc_include/stropts.h
-pyquda_core/pycparser/utils/fake_libc_include/syslog.h
-pyquda_core/pycparser/utils/fake_libc_include/tar.h
-pyquda_core/pycparser/utils/fake_libc_include/termios.h
-pyquda_core/pycparser/utils/fake_libc_include/tgmath.h
-pyquda_core/pycparser/utils/fake_libc_include/threads.h
-pyquda_core/pycparser/utils/fake_libc_include/time.h
-pyquda_core/pycparser/utils/fake_libc_include/trace.h
-pyquda_core/pycparser/utils/fake_libc_include/ulimit.h
-pyquda_core/pycparser/utils/fake_libc_include/unctrl.h
-pyquda_core/pycparser/utils/fake_libc_include/unistd.h
-pyquda_core/pycparser/utils/fake_libc_include/utime.h
-pyquda_core/pycparser/utils/fake_libc_include/utmp.h
-pyquda_core/pycparser/utils/fake_libc_include/utmpx.h
-pyquda_core/pycparser/utils/fake_libc_include/wchar.h
-pyquda_core/pycparser/utils/fake_libc_include/wctype.h
-pyquda_core/pycparser/utils/fake_libc_include/wordexp.h
-pyquda_core/pycparser/utils/fake_libc_include/zlib.h
-pyquda_core/pycparser/utils/fake_libc_include/X11/Intrinsic.h
-pyquda_core/pycparser/utils/fake_libc_include/X11/Xlib.h
-pyquda_core/pycparser/utils/fake_libc_include/X11/_X11_fake_defines.h
-pyquda_core/pycparser/utils/fake_libc_include/X11/_X11_fake_typedefs.h
-pyquda_core/pycparser/utils/fake_libc_include/arpa/inet.h
-pyquda_core/pycparser/utils/fake_libc_include/asm-generic/int-ll64.h
-pyquda_core/pycparser/utils/fake_libc_include/linux/socket.h
-pyquda_core/pycparser/utils/fake_libc_include/linux/version.h
-pyquda_core/pycparser/utils/fake_libc_include/mir_toolkit/client_types.h
-pyquda_core/pycparser/utils/fake_libc_include/net/if.h
-pyquda_core/pycparser/utils/fake_libc_include/netinet/in.h
-pyquda_core/pycparser/utils/fake_libc_include/netinet/tcp.h
-pyquda_core/pycparser/utils/fake_libc_include/openssl/err.h
-pyquda_core/pycparser/utils/fake_libc_include/openssl/evp.h
-pyquda_core/pycparser/utils/fake_libc_include/openssl/hmac.h
-pyquda_core/pycparser/utils/fake_libc_include/openssl/ssl.h
-pyquda_core/pycparser/utils/fake_libc_include/openssl/x509v3.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/ioctl.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/ipc.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/mman.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/msg.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/poll.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/resource.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/select.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/sem.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/shm.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/socket.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/stat.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/statvfs.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/sysctl.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/time.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/times.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/types.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/uio.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/un.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/utsname.h
-pyquda_core/pycparser/utils/fake_libc_include/sys/wait.h
-pyquda_core/pycparser/utils/fake_libc_include/xcb/xcb.h
-pyquda_io/__init__.py
-pyquda_io/_field_utils.py
-pyquda_io/_mpi_file.py
-pyquda_io/chroma.py
-pyquda_io/io_general.py
-pyquda_io/kyu.py
-pyquda_io/lime.py
-pyquda_io/milc.py
-pyquda_io/nersc.py
-pyquda_io/npy.py
-pyquda_io/openqcd.py
-pyquda_io/xqcd.py
-pyquda_plugins/pygwu/__init__.py
-pyquda_utils/__init__.py
-pyquda_utils/_version.py
-pyquda_utils/alg_remez.py
-pyquda_utils/convert.py
-pyquda_utils/core.py
-pyquda_utils/deprecated.py
-pyquda_utils/gamma.py
-pyquda_utils/gauge_nd_sun.py
-pyquda_utils/gpt.py
-pyquda_utils/hmc_param.py
-pyquda_utils/milc_rhmc_param.py
-pyquda_utils/phase.py
-pyquda_utils/quasi_axial_gauge_fixing.py
-pyquda_utils/source.py
-pyquda_utils/io/__init__.py

pyquda_utils-0.10.7.dev1/PyQUDA_Utils.egg-info/requires.txt

@@ -1 +0,0 @@
-PyQUDA

pyquda_utils-0.10.7.dev1/pyquda_core/pycparser/LICENSE

@@ -1,27 +0,0 @@
-pycparser -- A C parser in Python
-
-Copyright (c) 2008-2022, Eli Bendersky
-All rights reserved.
-
-Redistribution and use in source and binary forms, with or without modification,
-are permitted provided that the following conditions are met:
-
-* Redistributions of source code must retain the above copyright notice, this 
-  list of conditions and the following disclaimer.
-* Redistributions in binary form must reproduce the above copyright notice, 
-  this list of conditions and the following disclaimer in the documentation 
-  and/or other materials provided with the distribution.
-* Neither the name of the copyright holder nor the names of its contributors may 
-  be used to endorse or promote products derived from this software without 
-  specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND 
-ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED 
-WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE 
-DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE 
-LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR 
-CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE 
-GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) 
-HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT 
-LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT 
-OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

pyquda_utils-0.10.7.dev1/pyquda_core/pycparser/pycparser/__init__.py

@@ -1,93 +0,0 @@
-#-----------------------------------------------------------------
-# pycparser: __init__.py
-#
-# This package file exports some convenience functions for
-# interacting with pycparser
-#
-# Eli Bendersky [https://eli.thegreenplace.net/]
-# License: BSD
-#-----------------------------------------------------------------
-__all__ = ['c_lexer', 'c_parser', 'c_ast']
-__version__ = '2.22'
-
-import io
-from subprocess import check_output
-from .c_parser import CParser
-
-
-def preprocess_file(filename, cpp_path='cpp', cpp_args=''):
-    """ Preprocess a file using cpp.
-
-        filename:
-            Name of the file you want to preprocess.
-
-        cpp_path:
-        cpp_args:
-            Refer to the documentation of parse_file for the meaning of these
-            arguments.
-
-        When successful, returns the preprocessed file's contents.
-        Errors from cpp will be printed out.
-    """
-    path_list = [cpp_path]
-    if isinstance(cpp_args, list):
-        path_list += cpp_args
-    elif cpp_args != '':
-        path_list += [cpp_args]
-    path_list += [filename]
-
-    try:
-        # Note the use of universal_newlines to treat all newlines
-        # as \n for Python's purpose
-        text = check_output(path_list, universal_newlines=True)
-    except OSError as e:
-        raise RuntimeError("Unable to invoke 'cpp'.  " +
-            'Make sure its path was passed correctly\n' +
-            ('Original error: %s' % e))
-
-    return text
-
-
-def parse_file(filename, use_cpp=False, cpp_path='cpp', cpp_args='',
-               parser=None, encoding=None):
-    """ Parse a C file using pycparser.
-
-        filename:
-            Name of the file you want to parse.
-
-        use_cpp:
-            Set to True if you want to execute the C pre-processor
-            on the file prior to parsing it.
-
-        cpp_path:
-            If use_cpp is True, this is the path to 'cpp' on your
-            system. If no path is provided, it attempts to just
-            execute 'cpp', so it must be in your PATH.
-
-        cpp_args:
-            If use_cpp is True, set this to the command line arguments strings
-            to cpp. Be careful with quotes - it's best to pass a raw string
-            (r'') here. For example:
-            r'-I../utils/fake_libc_include'
-            If several arguments are required, pass a list of strings.
-
-        encoding:
-            Encoding to use for the file to parse
-
-        parser:
-            Optional parser object to be used instead of the default CParser
-
-        When successful, an AST is returned. ParseError can be
-        thrown if the file doesn't parse successfully.
-
-        Errors from cpp will be printed out.
-    """
-    if use_cpp:
-        text = preprocess_file(filename, cpp_path, cpp_args)
-    else:
-        with io.open(filename, encoding=encoding) as f:
-            text = f.read()
-
-    if parser is None:
-        parser = CParser()
-    return parser.parse(text, filename)