PyPartMC 0.0.34__tar.gz → 0.0.35__tar.gz

PyPartMC-0.0.35/.binder/postBuild

@@ -0,0 +1,4 @@
+#!/bin/bash
+set -e
+shopt -s extglob
+rm -rfv !("examples")

PyPartMC-0.0.35/.binder/requirements.txt

@@ -0,0 +1,6 @@
+PyPartMC>=0.0.19
+matplotlib
+ipywidgets
+voila
+open-atmos-jupyter-utils
+PySDM

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/.github/workflows/conda.yml

@@ -22,14 +22,8 @@ jobs:
         with:
           auto-update-conda: true
           python-version: ${{ matrix.python-version }}
-      - name: Install dependencies with pip in conda
-        run: |
-          python -m pip install --upgrade pip
-          pip install -r test-time-requirements.txt
-      - name: Install PyPartMC
-        run: |
-          pip install -e .
-      - name: Test with pytest
-        run: |
+      - run: python -m pip install --upgrade pip
+      - run: pip install -e .[tests]
+      - run: |
           cd tests
           pytest -v -s -We -p no:unraisableexception -k 'not test_todos_annotated' .

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/.github/workflows/pylint.yml

@@ -20,7 +20,8 @@ jobs:
         python-version: 3.9
     - run: |
         python -m pip install --upgrade pip
-        pip install pylint
-        pip install -r test-time-requirements.txt
-        pip install -e .
+        pip install pylint nbqa
+        pip install -e .[tests]
+        pip install -r .binder/requirements.txt
     - run: pylint --unsafe-load-any-extension=y --disable=fixme,no-member,trailing-newlines,missing-module-docstring,missing-class-docstring,missing-function-docstring,unnecessary-pass $(git ls-files '*.py')
+    - run: nbqa pylint --unsafe-load-any-extension=y --disable=fixme,no-member,wrong-import-position,trailing-whitespace,missing-function-docstring,missing-module-docstring $(git ls-files '*.ipynb')

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/.github/workflows/tests+pypi.yml

@@ -15,25 +15,22 @@ on:
     types: [published]
 
 jobs:
-  todos_annotated_and_debug_build_ok:
+  debug_build_ok:
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v2
         with:
           submodules: recursive
           fetch-depth: 0  # https://github.com/pypa/setuptools_scm/issues/480
-      - run: pip install -r test-time-requirements.txt
-      - run: DEBUG=1 VERBOSE=1 pip install --verbose -e .
-      - env:
-          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-        run: pytest --durations=10 -v -s -We -p no:unraisableexception tests/test_todos_annotated.py
+      - run: DEBUG=1 VERBOSE=1 pip install --verbose -e .[tests]
 
   build:
-    needs: [todos_annotated_and_debug_build_ok]
+    needs: [debug_build_ok]
     strategy:
       matrix:
         platform: [ubuntu-latest, macos-12, windows-latest]
         python-version: ["3.7", "3.8", "3.9", "3.10", "3.11"]
+      fail-fast: false
     runs-on: ${{ matrix.platform }}
     steps:
       - if: startsWith(matrix.platform, 'macos-')
@@ -71,7 +68,6 @@ jobs:
 
       - run: python -m pip install --upgrade pip==22.1.2
       - run: pip install build wheel
-      - run: pip install -r test-time-requirements.txt
 
       - run: |
           unset CI
@@ -99,9 +95,11 @@ jobs:
           name: dist
           path: dist
 
-      - run: |
+      - env:
+          SYSTEM_VERSION_COMPAT: 0 
+        run: |
           pip debug --verbose
-          SYSTEM_VERSION_COMPAT=0 pip install dist/*.whl
+          for i in dist/*.whl; do pip install $i[tests]; done;
           pip show --verbose PyPartMC
 
       ### make sure PyPartMC is not picked up from a local folder
@@ -109,6 +107,14 @@ jobs:
           cd tests
           python -c "import PyPartMC"
           pytest --durations=10 -v -s -We -p no:unraisableexception -k 'not test_todos_annotated' .
+          cd ..
+
+      - if: matrix.python-version != '3.7'
+        run: |
+          pip install -r gitmodules/devops_tests/requirements.txt
+          ex -sc 'g/^PyPartMC/d' -cx .binder/requirements.txt
+          pip install -r .binder/requirements.txt
+          GITHUB_TOKEN=${{ secrets.GITHUB_TOKEN }} pytest --durations=10 -v -s -We -p no:unraisableexception gitmodules/devops_tests
 
 ### uncomment to gain ssh access in case of failure
 #      - if: ${{ failure() }}

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/.gitmodules

@@ -38,3 +38,7 @@
 	path = gitmodules/json-fortran
 	url = https://github.com/jacobwilliams/json-fortran
 	shallow = true
+[submodule "gitmodules/devops_tests"]
+	path = gitmodules/devops_tests
+	url = https://github.com/open-atmos/devops_tests
+	shallow = true

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: PyPartMC
-Version: 0.0.34
+Version: 0.0.35
 Summary: Python interface to PartMC
 Author: Sylwester Arabas
 Author-email: sarabas@illinois.edu
@@ -10,6 +10,7 @@ Project-URL: Documentation, https://open-atmos.github.io/PyPartMC
 Project-URL: Source, https://github.com/open-atmos/PyPartMC/
 Requires-Python: >=3.7
 Description-Content-Type: text/markdown
+Provides-Extra: tests
 License-File: LICENSE
 
 ![logo](https://raw.githubusercontent.com/wiki/open-atmos/PyPartMC/logo.svg)
@@ -42,6 +43,14 @@ The Python API can facilitate using PartMC from other environments - see, e.g.,
 import PyPartMC
 ```
 
+#### Jupyter notebooks with examples 
+
+- Dry-Wet Particle Size Equilibration with PartMC and PySDM:   
+[![nbviewer](https://raw.githubusercontent.com/jupyter/design/master/logos/Badges/nbviewer_badge.svg)](https://nbviewer.jupyter.org/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/lognorm_ex.ipynb)
+[![Voila](https://img.shields.io/static/v1?label=Voil%C3%A0&logo=jupyter&color=teal&message=web+app)](https://mybinder.org/v2/gh/open-atmos/PyPartMC/main?urlpath=voila%2Frender%2Fexamples%2Flognorm_ex.ipynb)
+
 ## Features
 
 - works on Linux, macOS and Windows (compatibility assured with [CI builds](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/tests.yml))

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/PyPartMC.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: PyPartMC
-Version: 0.0.34
+Version: 0.0.35
 Summary: Python interface to PartMC
 Author: Sylwester Arabas
 Author-email: sarabas@illinois.edu
@@ -10,6 +10,7 @@ Project-URL: Documentation, https://open-atmos.github.io/PyPartMC
 Project-URL: Source, https://github.com/open-atmos/PyPartMC/
 Requires-Python: >=3.7
 Description-Content-Type: text/markdown
+Provides-Extra: tests
 License-File: LICENSE
 
 ![logo](https://raw.githubusercontent.com/wiki/open-atmos/PyPartMC/logo.svg)
@@ -42,6 +43,14 @@ The Python API can facilitate using PartMC from other environments - see, e.g.,
 import PyPartMC
 ```
 
+#### Jupyter notebooks with examples 
+
+- Dry-Wet Particle Size Equilibration with PartMC and PySDM:   
+[![nbviewer](https://raw.githubusercontent.com/jupyter/design/master/logos/Badges/nbviewer_badge.svg)](https://nbviewer.jupyter.org/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/lognorm_ex.ipynb)
+[![Voila](https://img.shields.io/static/v1?label=Voil%C3%A0&logo=jupyter&color=teal&message=web+app)](https://mybinder.org/v2/gh/open-atmos/PyPartMC/main?urlpath=voila%2Frender%2Fexamples%2Flognorm_ex.ipynb)
+
 ## Features
 
 - works on Linux, macOS and Windows (compatibility assured with [CI builds](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/tests.yml))

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/PyPartMC.egg-info/SOURCES.txt

@@ -5,7 +5,8 @@ LICENSE
 MANIFEST.in
 README.md
 setup.py
-test-time-requirements.txt
+.binder/postBuild
+.binder/requirements.txt
 .github/workflows/cancel.yml
 .github/workflows/conda.yml
 .github/workflows/cpplint.yml
@@ -25,6 +26,10 @@ PyPartMC.egg-info/dependency_links.txt
 PyPartMC.egg-info/not-zip-safe
 PyPartMC.egg-info/requires.txt
 PyPartMC.egg-info/top_level.txt
+examples/hello_world.ipynb
+examples/lognorm_ex.ipynb
+examples/terminal_velocities.ipynb
+examples/widgets_playground.ipynb
 gitmodules/SuiteSparse/AMD/Include/amd.h
 gitmodules/SuiteSparse/AMD/Include/amd_internal.h
 gitmodules/SuiteSparse/AMD/Source/amd.f
@@ -642,7 +647,6 @@ tests/test_loss_rate.py
 tests/test_run_part.py
 tests/test_run_part_opt.py
 tests/test_scenario.py
-tests/test_todos_annotated.py
 tests/test_units.py
 tests/test_util.py
 tests/test_version.py

PyPartMC-0.0.35/PyPartMC.egg-info/requires.txt

@@ -0,0 +1,6 @@
+numpy
+
+[tests]
+pytest
+fastcore!=1.5.8
+ghapi

{PyPartMC-0.0.34 → PyPartMC-0.0.35}/README.md

@@ -28,6 +28,14 @@ The Python API can facilitate using PartMC from other environments - see, e.g.,
 import PyPartMC
 ```
 
+#### Jupyter notebooks with examples 
+
+- Dry-Wet Particle Size Equilibration with PartMC and PySDM:   
+[![nbviewer](https://raw.githubusercontent.com/jupyter/design/master/logos/Badges/nbviewer_badge.svg)](https://nbviewer.jupyter.org/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/lognorm_ex.ipynb)
+[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/lognorm_ex.ipynb)
+[![Voila](https://img.shields.io/static/v1?label=Voil%C3%A0&logo=jupyter&color=teal&message=web+app)](https://mybinder.org/v2/gh/open-atmos/PyPartMC/main?urlpath=voila%2Frender%2Fexamples%2Flognorm_ex.ipynb)
+
 ## Features
 
 - works on Linux, macOS and Windows (compatibility assured with [CI builds](https://github.com/open-atmos/PyPartMC/blob/main/.github/workflows/tests.yml))

PyPartMC-0.0.35/examples/hello_world.ipynb

@@ -0,0 +1,94 @@
+{
+ "cells": [
+  {
+   "cell_type": "markdown",
+   "metadata": {},
+   "source": [
+    "[![nbviewer](https://raw.githubusercontent.com/jupyter/design/master/logos/Badges/nbviewer_badge.svg)](https://nbviewer.jupyter.org/github/open-atmos/PyPartMC/blob/main/examples/hello_world.ipynb)   \n",
+    "[![Open In Colab](https://colab.research.google.com/assets/colab-badge.svg)](https://colab.research.google.com/github/open-atmos/PyPartMC/blob/main/examples/hello_world.ipynb)    \n",
+    "[![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/open-atmos/PyPartMC.git/main?urlpath=lab/tree/examples/hello_world.ipynb)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "metadata": {
+    "id": "iEavJeJoPWzg"
+   },
+   "outputs": [],
+   "source": [
+    "import sys\n",
+    "if 'google.colab' in sys.modules:\n",
+    "    !pip --verbose install PyPartMC"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "metadata": {
+    "id": "VnLSclLsOxRz"
+   },
+   "outputs": [],
+   "source": [
+    "import PyPartMC as ppmc"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 4,
+   "metadata": {
+    "id": "s2VeF72qPsKB"
+   },
+   "outputs": [
+    {
+     "data": {
+      "text/plain": [
+       "16"
+      ]
+     },
+     "execution_count": 4,
+     "metadata": {},
+     "output_type": "execute_result"
+    }
+   ],
+   "source": [
+    "ppmc.pow2_above(13)"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "metadata": {
+    "id": "I_kD6AomXW6h"
+   },
+   "outputs": [],
+   "source": []
+  }
+ ],
+ "metadata": {
+  "colab": {
+   "collapsed_sections": [],
+   "name": "Untitled13.ipynb",
+   "provenance": []
+  },
+  "kernelspec": {
+   "display_name": "Python 3",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.9.1"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 1
+}