PyMetaAnalysis 0.2.0__tar.gz → 0.2.1__tar.gz

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/CHANGELOG.md

@@ -6,6 +6,13 @@ Changes planned for the next release accumulate under `Unreleased`.
 
 ## Unreleased
 
+## 0.2.1 - 2026-07-17
+
+### Fixed
+
+- README documentation and repository links use absolute URLs so they resolve
+  correctly when the project description is rendered on PyPI.
+
 ## 0.2.0 - 2026-07-16
 
 ### Added

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/CITATION.cff

@@ -8,8 +8,8 @@ authors:
   - family-names: Ding
     given-names: Zhaobo
     email: ding.zb@yahoo.com
-version: 0.2.0
-date-released: 2026-07-16
+version: 0.2.1
+date-released: 2026-07-17
 repository-code: https://github.com/ZhaoboDing/PyMetaAnalysis
 url: https://zhaoboding.github.io/PyMetaAnalysis/
 license: MIT

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: PyMetaAnalysis
-Version: 0.2.0
+Version: 0.2.1
 Summary: A pandas-first, auditable meta-analysis library for Python
 Project-URL: Documentation, https://zhaoboding.github.io/PyMetaAnalysis/
 Project-URL: Source, https://github.com/ZhaoboDing/PyMetaAnalysis
@@ -51,7 +51,7 @@ Description-Content-Type: text/markdown
 
 [![CI](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/ci.yml/badge.svg)](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/ci.yml)
 [![Documentation](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/pages.yml/badge.svg)](https://zhaoboding.github.io/PyMetaAnalysis/)
-[![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](LICENSE)
+[![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/LICENSE)
 
 PyMetaAnalysis is an early-stage, pandas-first Python library for conventional
 study-level meta-analysis. It accepts DataFrames, NumPy arrays, and ordinary
@@ -178,18 +178,18 @@ are descriptive small-study-effect diagnostics, not proof of publication bias.
 The complete documentation is published at
 [zhaoboding.github.io/PyMetaAnalysis](https://zhaoboding.github.io/PyMetaAnalysis/).
 
-- [Installation](docs/installation.md)
-- [Getting started](docs/getting-started.md)
-- [Input data and row decisions](docs/guides/input-data.md)
-- [Generic](docs/guides/generic-effects.md), [binary](docs/guides/binary-outcomes.md), and [continuous](docs/guides/continuous-outcomes.md) guides
-- [Choosing methods](docs/guides/method-selection.md) and [statistical formulas](docs/methods/statistical-methods.md)
-- [Sensitivity analysis](docs/guides/sensitivity-analysis.md) and [plotting](docs/guides/plotting.md)
-- [Public API](docs/reference/api.md), [result objects](docs/reference/results.md), and [report schema](docs/reference/report-schema.md)
-- [Validation strategy](docs/validation.md) and [scope/limitations](docs/limitations.md)
-- [Citation guidance](docs/citation.md)
-- [R `meta`/`metafor` mapping](docs/guides/r-interoperability.md)
-
-An executable [end-to-end notebook](examples/quickstart.ipynb) uses synthetic
+- [Installation](https://zhaoboding.github.io/PyMetaAnalysis/installation/)
+- [Getting started](https://zhaoboding.github.io/PyMetaAnalysis/getting-started/)
+- [Input data and row decisions](https://zhaoboding.github.io/PyMetaAnalysis/guides/input-data/)
+- [Generic](https://zhaoboding.github.io/PyMetaAnalysis/guides/generic-effects/), [binary](https://zhaoboding.github.io/PyMetaAnalysis/guides/binary-outcomes/), and [continuous](https://zhaoboding.github.io/PyMetaAnalysis/guides/continuous-outcomes/) guides
+- [Choosing methods](https://zhaoboding.github.io/PyMetaAnalysis/guides/method-selection/) and [statistical formulas](https://zhaoboding.github.io/PyMetaAnalysis/methods/statistical-methods/)
+- [Sensitivity analysis](https://zhaoboding.github.io/PyMetaAnalysis/guides/sensitivity-analysis/) and [plotting](https://zhaoboding.github.io/PyMetaAnalysis/guides/plotting/)
+- [Public API](https://zhaoboding.github.io/PyMetaAnalysis/reference/api/), [result objects](https://zhaoboding.github.io/PyMetaAnalysis/reference/results/), and [report schema](https://zhaoboding.github.io/PyMetaAnalysis/reference/report-schema/)
+- [Validation strategy](https://zhaoboding.github.io/PyMetaAnalysis/validation/) and [scope/limitations](https://zhaoboding.github.io/PyMetaAnalysis/limitations/)
+- [Citation guidance](https://zhaoboding.github.io/PyMetaAnalysis/citation/)
+- [R `meta`/`metafor` mapping](https://zhaoboding.github.io/PyMetaAnalysis/guides/r-interoperability/)
+
+An executable [end-to-end notebook](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/examples/quickstart.ipynb) uses synthetic
 data to demonstrate analysis, provenance, reporting, sensitivity, and plotting.
 
 Build the complete site locally with:
@@ -207,16 +207,22 @@ edge cases, and committed R `metafor` reference fixtures. CI covers Python
 distribution builds.
 
 This is independent cross-software validation, not a formal external
-statistical audit. See [validation](docs/validation.md) for exact coverage.
+statistical audit. See
+[validation](https://zhaoboding.github.io/PyMetaAnalysis/validation/) for exact
+coverage.
 
 ## Contributing
 
-See [CONTRIBUTING.md](CONTRIBUTING.md) and the full
-[development guide](docs/development.md). Statistical changes require formula
+See
+[CONTRIBUTING.md](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/CONTRIBUTING.md)
+and the full
+[development guide](https://zhaoboding.github.io/PyMetaAnalysis/development/).
+Statistical changes require formula
 documentation, boundary tests, and an independent comparison where available.
 
-Security-sensitive reports should follow [SECURITY.md](SECURITY.md).
+Security-sensitive reports should follow
+[SECURITY.md](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/SECURITY.md).
 
 ## License
 
-[MIT](LICENSE)
+[MIT](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/LICENSE)

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/README.md

@@ -2,7 +2,7 @@
 
 [![CI](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/ci.yml/badge.svg)](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/ci.yml)
 [![Documentation](https://github.com/ZhaoboDing/PyMetaAnalysis/actions/workflows/pages.yml/badge.svg)](https://zhaoboding.github.io/PyMetaAnalysis/)
-[![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](LICENSE)
+[![License: MIT](https://img.shields.io/badge/License-MIT-blue.svg)](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/LICENSE)
 
 PyMetaAnalysis is an early-stage, pandas-first Python library for conventional
 study-level meta-analysis. It accepts DataFrames, NumPy arrays, and ordinary
@@ -129,18 +129,18 @@ are descriptive small-study-effect diagnostics, not proof of publication bias.
 The complete documentation is published at
 [zhaoboding.github.io/PyMetaAnalysis](https://zhaoboding.github.io/PyMetaAnalysis/).
 
-- [Installation](docs/installation.md)
-- [Getting started](docs/getting-started.md)
-- [Input data and row decisions](docs/guides/input-data.md)
-- [Generic](docs/guides/generic-effects.md), [binary](docs/guides/binary-outcomes.md), and [continuous](docs/guides/continuous-outcomes.md) guides
-- [Choosing methods](docs/guides/method-selection.md) and [statistical formulas](docs/methods/statistical-methods.md)
-- [Sensitivity analysis](docs/guides/sensitivity-analysis.md) and [plotting](docs/guides/plotting.md)
-- [Public API](docs/reference/api.md), [result objects](docs/reference/results.md), and [report schema](docs/reference/report-schema.md)
-- [Validation strategy](docs/validation.md) and [scope/limitations](docs/limitations.md)
-- [Citation guidance](docs/citation.md)
-- [R `meta`/`metafor` mapping](docs/guides/r-interoperability.md)
-
-An executable [end-to-end notebook](examples/quickstart.ipynb) uses synthetic
+- [Installation](https://zhaoboding.github.io/PyMetaAnalysis/installation/)
+- [Getting started](https://zhaoboding.github.io/PyMetaAnalysis/getting-started/)
+- [Input data and row decisions](https://zhaoboding.github.io/PyMetaAnalysis/guides/input-data/)
+- [Generic](https://zhaoboding.github.io/PyMetaAnalysis/guides/generic-effects/), [binary](https://zhaoboding.github.io/PyMetaAnalysis/guides/binary-outcomes/), and [continuous](https://zhaoboding.github.io/PyMetaAnalysis/guides/continuous-outcomes/) guides
+- [Choosing methods](https://zhaoboding.github.io/PyMetaAnalysis/guides/method-selection/) and [statistical formulas](https://zhaoboding.github.io/PyMetaAnalysis/methods/statistical-methods/)
+- [Sensitivity analysis](https://zhaoboding.github.io/PyMetaAnalysis/guides/sensitivity-analysis/) and [plotting](https://zhaoboding.github.io/PyMetaAnalysis/guides/plotting/)
+- [Public API](https://zhaoboding.github.io/PyMetaAnalysis/reference/api/), [result objects](https://zhaoboding.github.io/PyMetaAnalysis/reference/results/), and [report schema](https://zhaoboding.github.io/PyMetaAnalysis/reference/report-schema/)
+- [Validation strategy](https://zhaoboding.github.io/PyMetaAnalysis/validation/) and [scope/limitations](https://zhaoboding.github.io/PyMetaAnalysis/limitations/)
+- [Citation guidance](https://zhaoboding.github.io/PyMetaAnalysis/citation/)
+- [R `meta`/`metafor` mapping](https://zhaoboding.github.io/PyMetaAnalysis/guides/r-interoperability/)
+
+An executable [end-to-end notebook](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/examples/quickstart.ipynb) uses synthetic
 data to demonstrate analysis, provenance, reporting, sensitivity, and plotting.
 
 Build the complete site locally with:
@@ -158,16 +158,22 @@ edge cases, and committed R `metafor` reference fixtures. CI covers Python
 distribution builds.
 
 This is independent cross-software validation, not a formal external
-statistical audit. See [validation](docs/validation.md) for exact coverage.
+statistical audit. See
+[validation](https://zhaoboding.github.io/PyMetaAnalysis/validation/) for exact
+coverage.
 
 ## Contributing
 
-See [CONTRIBUTING.md](CONTRIBUTING.md) and the full
-[development guide](docs/development.md). Statistical changes require formula
+See
+[CONTRIBUTING.md](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/CONTRIBUTING.md)
+and the full
+[development guide](https://zhaoboding.github.io/PyMetaAnalysis/development/).
+Statistical changes require formula
 documentation, boundary tests, and an independent comparison where available.
 
-Security-sensitive reports should follow [SECURITY.md](SECURITY.md).
+Security-sensitive reports should follow
+[SECURITY.md](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/SECURITY.md).
 
 ## License
 
-[MIT](LICENSE)
+[MIT](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/LICENSE)

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/docs/index.md

@@ -82,10 +82,11 @@ lists unsupported methods explicitly.
 
 ## Project status
 
-PyMetaAnalysis 0.2.0 adds direct generic standard-error input to the initial
-public analysis scope. It has not undergone a formal external statistical
-audit. Pin the package version for consequential work and independently check
-important analyses. See the repository
+PyMetaAnalysis 0.2.1 fixes documentation and repository links in the PyPI
+project description. Version 0.2.0 added direct generic standard-error input
+to the initial public analysis scope. The project has not undergone a formal
+external statistical audit. Pin the package version for consequential work
+and independently check important analyses. See the repository
 [changelog](https://github.com/ZhaoboDing/PyMetaAnalysis/blob/main/CHANGELOG.md)
 and [contribution guide](development.md). For manuscripts and archived
 analyses, see [citing PyMetaAnalysis](citation.md).

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/docs/limitations.md

@@ -69,7 +69,7 @@ workflow must version those artifacts separately.
 
 ## Stability and review status
 
-The package version is currently `0.2.0`. Public APIs and serialized schemas
+The package version is currently `0.2.1`. Public APIs and serialized schemas
 may change during the 0.x series. Pin versions in analysis environments and
 inspect changelog/schema updates before upgrading.
 

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/src/meta_analyze/_version.py

@@ -1,3 +1,3 @@
 """Single source of truth for the package version."""
 
-__version__ = "0.2.0"
+__version__ = "0.2.1"

{pymetaanalysis-0.2.0 → pymetaanalysis-0.2.1}/tests/test_documentation.py

@@ -51,3 +51,13 @@ def test_relative_markdown_links_resolve(path: Path) -> None:
             assert (path.parent / relative).exists(), (
                 f"Broken relative link {target!r} in {path.relative_to(ROOT)}"
             )
+
+
+def test_pypi_readme_links_are_absolute() -> None:
+    """PyPI resolves relative long-description links against its project URL."""
+    pattern = re.compile(r"\]\(([^)]+)\)")
+    for raw_target in pattern.findall((ROOT / "README.md").read_text(encoding="utf-8")):
+        target = raw_target.split(maxsplit=1)[0].strip("<>")
+        assert target.startswith(("https://", "http://", "#", "mailto:")), (
+            f"README link {target!r} must be absolute so it works on PyPI"
+        )