PyMARE 0.0.6__tar.gz → 0.0.7__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (31) hide show
  1. {PyMARE-0.0.6 → PyMARE-0.0.7}/PKG-INFO +1 -1
  2. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/PKG-INFO +1 -1
  3. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/_version.py +3 -3
  4. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/results.py +4 -2
  5. {PyMARE-0.0.6 → PyMARE-0.0.7}/LICENSE +0 -0
  6. {PyMARE-0.0.6 → PyMARE-0.0.7}/MANIFEST.in +0 -0
  7. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/SOURCES.txt +0 -0
  8. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/dependency_links.txt +0 -0
  9. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/not-zip-safe +0 -0
  10. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/requires.txt +0 -0
  11. {PyMARE-0.0.6 → PyMARE-0.0.7}/PyMARE.egg-info/top_level.txt +0 -0
  12. {PyMARE-0.0.6 → PyMARE-0.0.7}/README.md +0 -0
  13. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/__init__.py +0 -0
  14. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/core.py +0 -0
  15. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/datasets/__init__.py +0 -0
  16. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/datasets/metadat.py +0 -0
  17. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/effectsize/__init__.py +0 -0
  18. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/effectsize/base.py +0 -0
  19. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/effectsize/expressions.json +0 -0
  20. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/effectsize/expressions.py +0 -0
  21. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/estimators/__init__.py +0 -0
  22. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/estimators/combination.py +0 -0
  23. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/estimators/estimators.py +0 -0
  24. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/resources/datasets/michael2013.json +0 -0
  25. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/resources/datasets/michael2013.tsv +0 -0
  26. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/stats.py +0 -0
  27. {PyMARE-0.0.6 → PyMARE-0.0.7}/pymare/utils.py +0 -0
  28. {PyMARE-0.0.6 → PyMARE-0.0.7}/pyproject.toml +0 -0
  29. {PyMARE-0.0.6 → PyMARE-0.0.7}/setup.cfg +0 -0
  30. {PyMARE-0.0.6 → PyMARE-0.0.7}/setup.py +0 -0
  31. {PyMARE-0.0.6 → PyMARE-0.0.7}/versioneer.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: PyMARE
3
- Version: 0.0.6
3
+ Version: 0.0.7
4
4
  Summary: PyMARE: Python Meta-Analysis & Regression Engine
5
5
  Home-page: https://github.com/neurostuff/PyMARE
6
6
  Author: PyMARE developers
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: PyMARE
3
- Version: 0.0.6
3
+ Version: 0.0.7
4
4
  Summary: PyMARE: Python Meta-Analysis & Regression Engine
5
5
  Home-page: https://github.com/neurostuff/PyMARE
6
6
  Author: PyMARE developers
@@ -8,11 +8,11 @@ import json
8
8
 
9
9
  version_json = '''
10
10
  {
11
- "date": "2024-05-01T11:57:03-0500",
11
+ "date": "2024-08-08T16:30:52-0500",
12
12
  "dirty": false,
13
13
  "error": null,
14
- "full-revisionid": "e94ddf32cd4ffbd4f5cf27e406bf9195745982f7",
15
- "version": "0.0.6"
14
+ "full-revisionid": "eb67d0bee37ea522aaa1aa845a723945b6b4744a",
15
+ "version": "0.0.7"
16
16
  }
17
17
  ''' # END VERSION_JSON
18
18
 
@@ -84,16 +84,18 @@ class MetaRegressionResults:
84
84
  =========== ==========================================================================
85
85
  """
86
86
  beta, se = self.fe_params, self.fe_se
87
+ epsilon = np.finfo(beta.dtype).eps
87
88
  z_se = ss.norm.ppf(1 - alpha / 2)
88
89
  z = beta / se
89
-
90
+ p = 1 - np.abs(0.5 - ss.norm.cdf(z)) * 2
91
+ p[p == 0] += epsilon
90
92
  stats = {
91
93
  "est": beta,
92
94
  "se": se,
93
95
  "ci_l": beta - z_se * se,
94
96
  "ci_u": beta + z_se * se,
95
97
  "z": z,
96
- "p": 1 - np.abs(0.5 - ss.norm.cdf(z)) * 2,
98
+ "p": p,
97
99
  }
98
100
 
99
101
  return stats
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes
File without changes