PyAntiGen 1.0__tar.gz → 1.0.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (40) hide show
  1. {pyantigen-1.0 → pyantigen-1.0.4}/PKG-INFO +9 -1
  2. {pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/PKG-INFO +9 -1
  3. {pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/SOURCES.txt +1 -0
  4. pyantigen-1.0.4/PyAntiGen.egg-info/requires.txt +8 -0
  5. {pyantigen-1.0 → pyantigen-1.0.4}/pyproject.toml +9 -4
  6. {pyantigen-1.0 → pyantigen-1.0.4}/LICENSE +0 -0
  7. {pyantigen-1.0 → pyantigen-1.0.4}/MANIFEST.in +0 -0
  8. {pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/dependency_links.txt +0 -0
  9. {pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/top_level.txt +0 -0
  10. {pyantigen-1.0 → pyantigen-1.0.4}/README.md +0 -0
  11. {pyantigen-1.0 → pyantigen-1.0.4}/framework/AntimonyGen.py +0 -0
  12. {pyantigen-1.0 → pyantigen-1.0.4}/framework/RxnDict_to_antimony.py +0 -0
  13. {pyantigen-1.0 → pyantigen-1.0.4}/framework/TelluriumGen.py +0 -0
  14. {pyantigen-1.0 → pyantigen-1.0.4}/framework/__init__.py +0 -0
  15. {pyantigen-1.0 → pyantigen-1.0.4}/framework/antimony_utils.py +0 -0
  16. {pyantigen-1.0 → pyantigen-1.0.4}/framework/cli.py +0 -0
  17. {pyantigen-1.0 → pyantigen-1.0.4}/framework/data_interpolation.py +0 -0
  18. {pyantigen-1.0 → pyantigen-1.0.4}/framework/isotopomer_tools.py +0 -0
  19. {pyantigen-1.0 → pyantigen-1.0.4}/framework/model_generation.py +0 -0
  20. {pyantigen-1.0 → pyantigen-1.0.4}/framework/models.py +0 -0
  21. {pyantigen-1.0 → pyantigen-1.0.4}/framework/module_base.py +0 -0
  22. {pyantigen-1.0 → pyantigen-1.0.4}/framework/pyantigen.py +0 -0
  23. {pyantigen-1.0 → pyantigen-1.0.4}/framework/rate_laws.py +0 -0
  24. {pyantigen-1.0 → pyantigen-1.0.4}/framework/reaction_creation.py +0 -0
  25. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/AntiGen_paths.py +0 -0
  26. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Example_generate.py +0 -0
  27. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Example_run.py +0 -0
  28. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Data.py +0 -0
  29. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Events.py +0 -0
  30. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Experiment.py +0 -0
  31. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Loss_config.py +0 -0
  32. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Observed_species.py +0 -0
  33. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Optimizer_settings.py +0 -0
  34. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Plots.py +0 -0
  35. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Solver_settings.py +0 -0
  36. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/Example/Modules/Update_parameters.py +0 -0
  37. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/data/ADneg.csv +0 -0
  38. {pyantigen-1.0 → pyantigen-1.0.4}/framework/template/data/ADpos.csv +0 -0
  39. {pyantigen-1.0 → pyantigen-1.0.4}/setup.cfg +0 -0
  40. {pyantigen-1.0 → pyantigen-1.0.4}/setup.py +0 -0
{pyantigen-1.0 → pyantigen-1.0.4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: PyAntiGen
3
- Version: 1.0
3
+ Version: 1.0.4
4
4
  Summary: Short one-line description of what PyAntiGen does
5
5
  Author: Open Source Contributor
6
6
  Author-email: Don <you@example.com>
@@ -13,6 +13,14 @@ Classifier: Operating System :: OS Independent
13
13
  Requires-Python: >=3.9
14
14
  Description-Content-Type: text/markdown
15
15
  License-File: LICENSE
16
+ Requires-Dist: tellurium
17
+ Requires-Dist: scipy
18
+ Requires-Dist: numpy
19
+ Requires-Dist: pandas
20
+ Requires-Dist: numdifftools
21
+ Requires-Dist: openpyxl
22
+ Requires-Dist: matplotlib
23
+ Requires-Dist: pypesto
16
24
  Dynamic: author
17
25
  Dynamic: license-file
18
26
 
{pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: PyAntiGen
3
- Version: 1.0
3
+ Version: 1.0.4
4
4
  Summary: Short one-line description of what PyAntiGen does
5
5
  Author: Open Source Contributor
6
6
  Author-email: Don <you@example.com>
@@ -13,6 +13,14 @@ Classifier: Operating System :: OS Independent
13
13
  Requires-Python: >=3.9
14
14
  Description-Content-Type: text/markdown
15
15
  License-File: LICENSE
16
+ Requires-Dist: tellurium
17
+ Requires-Dist: scipy
18
+ Requires-Dist: numpy
19
+ Requires-Dist: pandas
20
+ Requires-Dist: numdifftools
21
+ Requires-Dist: openpyxl
22
+ Requires-Dist: matplotlib
23
+ Requires-Dist: pypesto
16
24
  Dynamic: author
17
25
  Dynamic: license-file
18
26
 
{pyantigen-1.0 → pyantigen-1.0.4}/PyAntiGen.egg-info/SOURCES.txt RENAMED
@@ -6,6 +6,7 @@ setup.py
6
6
  PyAntiGen.egg-info/PKG-INFO
7
7
  PyAntiGen.egg-info/SOURCES.txt
8
8
  PyAntiGen.egg-info/dependency_links.txt
9
+ PyAntiGen.egg-info/requires.txt
9
10
  PyAntiGen.egg-info/top_level.txt
10
11
  framework/AntimonyGen.py
11
12
  framework/RxnDict_to_antimony.py
pyantigen-1.0.4/PyAntiGen.egg-info/requires.txt ADDED
@@ -0,0 +1,8 @@
1
+ tellurium
2
+ scipy
3
+ numpy
4
+ pandas
5
+ numdifftools
6
+ openpyxl
7
+ matplotlib
8
+ pypesto
{pyantigen-1.0 → pyantigen-1.0.4}/pyproject.toml RENAMED
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
4
4
 
5
5
  [project]
6
6
  name = "PyAntiGen"
7
- version = "v1.0"
7
+ version = "v1.0.4"
8
8
  description = "Short one-line description of what PyAntiGen does"
9
9
  readme = "README.md"
10
10
  license = { text = "MIT" } # adjust if needed
@@ -19,9 +19,14 @@ classifiers = [
19
19
  "Operating System :: OS Independent",
20
20
  ]
21
21
  dependencies = [
22
- # list your runtime deps here, e.g.:
23
- # "numpy>=1.24",
24
- # "scipy>=1.10",
22
+ "tellurium",
23
+ "scipy",
24
+ "numpy",
25
+ "pandas",
26
+ "numdifftools",
27
+ "openpyxl",
28
+ "matplotlib",
29
+ "pypesto",
25
30
  ]
26
31
 
27
32
  [project.urls]
{pyantigen-1.0 → pyantigen-1.0.4}/LICENSE RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/MANIFEST.in RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/README.md RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/framework/__init__.py RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/framework/cli.py RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/framework/models.py RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/setup.cfg RENAMED
File without changes
{pyantigen-1.0 → pyantigen-1.0.4}/setup.py RENAMED
File without changes