Py4HEAppE 2.1.1__tar.gz → 2.2.0__tar.gz

{py4heappe-2.1.1 → py4heappe-2.2.0}/.gitignore

@@ -9,8 +9,7 @@ __pycache__
 .env
 lexis_logs.log
 py4heappe.log
-UNKNOWN.egg-info/dependency_links.txt
-UNKNOWN.egg-info/PKG-INFO
-UNKNOWN.egg-info/SOURCES.txt
-UNKNOWN.egg-info/top_level.txt
+UNKNOWN.egg-info/
+src/Py4HEAppE.egg-info/
 data_transfer/
+tests/cli_test_results.xml

py4heappe-2.2.0/.gitlab/issue_templates/Backlog.md

@@ -0,0 +1,11 @@
+### Proposal
+
+<!-- Use this section to explain the feature and how it will work. It can be helpful to add technical details, design proposals, and links to related epics or issues. -->
+
+<!-- Consider adding related issues and epics to this issue. You can also reference the Feature Proposal Template (https://gitlab.com/gitlab-org/gitlab/-/blob/master/.gitlab/issue_templates/Feature%20proposal%20-%20detailed.md) for additional details to consider adding to this issue. Additionally, as a data oriented organization, when your feature exits planning breakdown, consider adding the `What does success look like, and how can we measure that?` section.
+-->
+
+
+
+/label ~Backlog 
+/label ~"2. Ready for development" 

py4heappe-2.2.0/.gitlab/issue_templates/Bug.md

@@ -0,0 +1,24 @@
+### Environment
+<!-- Specify if the environment is Development, Testing, or Production. 
+Optionally, include the operating system and browser if it is a UI-related issue. --> 
+
+### Summary
+<!-- Summarize the bug encountered concisely. -->
+
+### Steps to reproduce
+<!-- Describe how one can reproduce the issue - this is very important. Please use an ordered list. -->
+
+
+### What is the current *bug* behavior?
+<!-- Describe what actually happens. -->
+
+### What is the expected *correct* behavior?
+<!-- Describe what you should see instead. -->
+
+### Relevant logs and/or screenshots
+<!-- Paste any relevant logs - please use code blocks (```) to format console output, logs, and code
+ as it's tough to read otherwise. -->
+
+
+/label ~Bug 
+/label ~"2. Ready for development" 

py4heappe-2.2.0/.gitlab/issue_templates/Feature.md

@@ -0,0 +1,11 @@
+### Proposal
+
+<!-- Use this section to explain the feature and how it will work. It can be helpful to add technical details, design proposals, and links to related epics or issues. -->
+
+<!-- Consider adding related issues and epics to this issue. You can also reference the Feature Proposal Template (https://gitlab.com/gitlab-org/gitlab/-/blob/master/.gitlab/issue_templates/Feature%20proposal%20-%20detailed.md) for additional details to consider adding to this issue. Additionally, as a data oriented organization, when your feature exits planning breakdown, consider adding the `What does success look like, and how can we measure that?` section.
+-->
+
+
+
+/label ~Feature 
+/label ~"2. Ready for development" 

py4heappe-2.2.0/.gitlab/merge_request_templates/Default.md

@@ -0,0 +1,24 @@
+### Related Issues
+<!--
+/**
+ * This section of the code requires the developer to attach links to the issues
+ * that are included in the merge request. This helps in tracking the changes
+ * and understanding the context of the modifications made.
+ * Please include the link in the format #<ID_ISSUE>.
+ */
+-->
+
+
+### Additional Notes
+Include any extra information or considerations for reviewers, such as impacted areas of the codebase.
+
+### How to validate
+<!--
+/**
+ * This section should describe how to validate the changes made in the merge request.
+ * The developer should provide clear steps or instructions to ensure the changes work as intended.
+ */
+-->
+
+
+/draft 

{py4heappe-2.1.1 → py4heappe-2.2.0}/CHANGELOG.md

@@ -5,6 +5,20 @@ All notable changes to this project will be documented in this file.
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
+## V2.2.0
+
+### Compatible with HEAppE V5.0.X, V4.3.X and V4.2.X
+
+### Changed
+- Update requirements package
+- Adding File Commands Groups in CLI (support Job Management)
+
+## V2.1.2
+
+### Compatible with HEAppE V5.0.X, V4.3.X and V4.2.X
+
+### Changed
+- Requirements package (python-dotenv)
 
 ## V2.1.1
 

{py4heappe-2.1.1 → py4heappe-2.2.0}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: Py4HEAppE
-Version: 2.1.1
+Version: 2.2.0
 Summary: Py4HEAppE is client library for easy access to HEAppE Middleware
 Author-email: IT4Innovations <support.heappe@it4i.cz>
 License-Expression: MIT
@@ -13,14 +13,15 @@ Classifier: Operating System :: OS Independent
 Requires-Python: >=3.11
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: paramiko==3.5.0
+Requires-Dist: paramiko==4.0.0
 Requires-Dist: scp==0.15.0
-Requires-Dist: urllib3==2.2.3
-Requires-Dist: certifi==2024.8.30
-Requires-Dist: six==1.16.0
-Requires-Dist: typer==0.13.1
-Requires-Dist: python-dotenv==1.0.1
-Requires-Dist: validators==0.34.0
+Requires-Dist: urllib3==2.5.0
+Requires-Dist: certifi==2025.8.3
+Requires-Dist: six==1.17.0
+Requires-Dist: click==8.3.0
+Requires-Dist: typer>=0.15.0
+Requires-Dist: python-dotenv>=0.21.1
+Requires-Dist: validators==0.35.0
 Dynamic: license-file
 
 <img align="right" width="35%" src="https://raw.githubusercontent.com/It4innovations/Py4HEAppE/refs/heads/master/docs/imgs/logo.png">
@@ -48,6 +49,7 @@ The library ensures consistent and reliable communication with the HEAppE API, h
 ## Supported HEAppE versions
 | Py4HEAppE      | HEAppE Version       |  Notes                             |
 |:--------------:|:--------------------:|:-----------------------------------|
+| 2.2.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/File sections in CLI     |
 | 2.1.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/Job/File sections in CLI |
 | 2.0.X          | 5.0.X                | W/O Admin/Job/File sections in CLI |
 | 1.X.X          | 4.3.X, 4.2.X         | W/O Admin/Job/File sections in CLI |
@@ -101,6 +103,9 @@ py4heappe CmdTemp --help
 # Information commands group
 py4heappe Info --help 
 
+# Job Management commands group
+py4heappe Job --help
+
 # Report commands group
 py4heappe Report --help 
 ```
@@ -117,9 +122,9 @@ In this mode, the Py4HEAppE package is used as a wrapper for HEAppE API specific
 It is required to specify following modules in "requirements.txt" file.
  
 ```text
-paramiko==3.5.0
+paramiko==4.0.0
 scp==0.15.0
-urllib3==2.2.3
+urllib3==2.5.0
 ```
 
 The code snapshot illustrated an example of "how to" obtain cluster information from the HEAppE Instance. For more detailed examples of basic HPC workflow, please refer to the [example.py](https://github.com/It4innovations/Py4HEAppE/blob/master/docs/examples/example.py) file.

{py4heappe-2.1.1 → py4heappe-2.2.0}/README.md

@@ -23,6 +23,7 @@ The library ensures consistent and reliable communication with the HEAppE API, h
 ## Supported HEAppE versions
 | Py4HEAppE      | HEAppE Version       |  Notes                             |
 |:--------------:|:--------------------:|:-----------------------------------|
+| 2.2.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/File sections in CLI     |
 | 2.1.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/Job/File sections in CLI |
 | 2.0.X          | 5.0.X                | W/O Admin/Job/File sections in CLI |
 | 1.X.X          | 4.3.X, 4.2.X         | W/O Admin/Job/File sections in CLI |
@@ -76,6 +77,9 @@ py4heappe CmdTemp --help
 # Information commands group
 py4heappe Info --help 
 
+# Job Management commands group
+py4heappe Job --help
+
 # Report commands group
 py4heappe Report --help 
 ```
@@ -92,9 +96,9 @@ In this mode, the Py4HEAppE package is used as a wrapper for HEAppE API specific
 It is required to specify following modules in "requirements.txt" file.
  
 ```text
-paramiko==3.5.0
+paramiko==4.0.0
 scp==0.15.0
-urllib3==2.2.3
+urllib3==2.5.0
 ```
 
 The code snapshot illustrated an example of "how to" obtain cluster information from the HEAppE Instance. For more detailed examples of basic HPC workflow, please refer to the [example.py](https://github.com/It4innovations/Py4HEAppE/blob/master/docs/examples/example.py) file.

{py4heappe-2.1.1 → py4heappe-2.2.0}/pyproject.toml

@@ -6,7 +6,7 @@ build-backend = "setuptools.build_meta"
 name = "Py4HEAppE"
 authors = [{name = "IT4Innovations", email = "support.heappe@it4i.cz"}]
 description = "Py4HEAppE is client library for easy access to HEAppE Middleware"
-version = "2.1.1"
+version = "2.2.0"
 license = "MIT"
 readme = "README.md"
 requires-python = ">=3.11"

py4heappe-2.2.0/requirements.txt

@@ -0,0 +1,9 @@
+paramiko==4.0.0
+scp==0.15.0
+urllib3==2.5.0
+certifi==2025.8.3
+six==1.17.0
+click==8.3.0
+typer>=0.15.0
+python-dotenv>=0.21.1
+validators==0.35.0

{py4heappe-2.1.1 → py4heappe-2.2.0}/src/Py4HEAppE.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: Py4HEAppE
-Version: 2.1.1
+Version: 2.2.0
 Summary: Py4HEAppE is client library for easy access to HEAppE Middleware
 Author-email: IT4Innovations <support.heappe@it4i.cz>
 License-Expression: MIT
@@ -13,14 +13,15 @@ Classifier: Operating System :: OS Independent
 Requires-Python: >=3.11
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: paramiko==3.5.0
+Requires-Dist: paramiko==4.0.0
 Requires-Dist: scp==0.15.0
-Requires-Dist: urllib3==2.2.3
-Requires-Dist: certifi==2024.8.30
-Requires-Dist: six==1.16.0
-Requires-Dist: typer==0.13.1
-Requires-Dist: python-dotenv==1.0.1
-Requires-Dist: validators==0.34.0
+Requires-Dist: urllib3==2.5.0
+Requires-Dist: certifi==2025.8.3
+Requires-Dist: six==1.17.0
+Requires-Dist: click==8.3.0
+Requires-Dist: typer>=0.15.0
+Requires-Dist: python-dotenv>=0.21.1
+Requires-Dist: validators==0.35.0
 Dynamic: license-file
 
 <img align="right" width="35%" src="https://raw.githubusercontent.com/It4innovations/Py4HEAppE/refs/heads/master/docs/imgs/logo.png">
@@ -48,6 +49,7 @@ The library ensures consistent and reliable communication with the HEAppE API, h
 ## Supported HEAppE versions
 | Py4HEAppE      | HEAppE Version       |  Notes                             |
 |:--------------:|:--------------------:|:-----------------------------------|
+| 2.2.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/File sections in CLI     |
 | 2.1.X          | 5.0.X, 4.3.X, 4.2.X  | W/O Admin/Job/File sections in CLI |
 | 2.0.X          | 5.0.X                | W/O Admin/Job/File sections in CLI |
 | 1.X.X          | 4.3.X, 4.2.X         | W/O Admin/Job/File sections in CLI |
@@ -101,6 +103,9 @@ py4heappe CmdTemp --help
 # Information commands group
 py4heappe Info --help 
 
+# Job Management commands group
+py4heappe Job --help
+
 # Report commands group
 py4heappe Report --help 
 ```
@@ -117,9 +122,9 @@ In this mode, the Py4HEAppE package is used as a wrapper for HEAppE API specific
 It is required to specify following modules in "requirements.txt" file.
  
 ```text
-paramiko==3.5.0
+paramiko==4.0.0
 scp==0.15.0
-urllib3==2.2.3
+urllib3==2.5.0
 ```
 
 The code snapshot illustrated an example of "how to" obtain cluster information from the HEAppE Instance. For more detailed examples of basic HPC workflow, please refer to the [example.py](https://github.com/It4innovations/Py4HEAppE/blob/master/docs/examples/example.py) file.

{py4heappe-2.1.1 → py4heappe-2.2.0}/src/Py4HEAppE.egg-info/SOURCES.txt

@@ -5,6 +5,10 @@ LICENSE
 README.md
 pyproject.toml
 requirements.txt
+.gitlab/issue_templates/Backlog.md
+.gitlab/issue_templates/Bug.md
+.gitlab/issue_templates/Feature.md
+.gitlab/merge_request_templates/Default.md
 .gitlab/stages/.check.yml
 .gitlab/stages/.generation.yml
 .gitlab/stages/.publish.yml
@@ -230,6 +234,7 @@ src/py4heappe/heappe_v5/cli/configuration.py
 src/py4heappe/heappe_v5/cli/information.py
 src/py4heappe/heappe_v5/cli/job_management.py
 src/py4heappe/heappe_v5/cli/report.py
+src/py4heappe/heappe_v5/cli/transfer.py
 src/py4heappe/heappe_v5/core/__init__.py
 src/py4heappe/heappe_v5/core/api_client.py
 src/py4heappe/heappe_v5/core/configuration.py

py4heappe-2.2.0/src/Py4HEAppE.egg-info/requires.txt

@@ -0,0 +1,9 @@
+paramiko==4.0.0
+scp==0.15.0
+urllib3==2.5.0
+certifi==2025.8.3
+six==1.17.0
+click==8.3.0
+typer>=0.15.0
+python-dotenv>=0.21.1
+validators==0.35.0

{py4heappe-2.1.1 → py4heappe-2.2.0}/src/py4heappe/heappe_v5/cli/command_template.py

@@ -97,8 +97,8 @@ def modify_command_template(id:int = typer.Option(..., help='Id (Command templat
                             extAllocCommand:str = typer.Option(None, help='Extended allocation command'),
                             execScript:str = typer.Option(..., help='Path to executable file/script'),
                             prepScript:str = typer.Option(None, help='Path to preparation script or specific prerequisites/module loads'),
-                            clusterNodeTypeId:int = typer.Option(None, help='Cluster node type identifier'),
-                            isEnabled:bool = typer.Option(None, help='Is enabled')):
+                            clusterNodeTypeId:int = typer.Option(..., help='Cluster node type identifier'),
+                            enabled:bool = typer.Option(True, help='Is enabled')):
     """Modify existing command template"""
     try:
         utils.print_and_log("Modifying the command template ...")
@@ -112,7 +112,7 @@ def modify_command_template(id:int = typer.Option(..., help='Id (Command templat
                 "PreparationScript": prepScript,
                 "ExecutableFile": execScript,
                 "ClusterNodeTypeId": clusterNodeTypeId,
-                "IsEnabled": isEnabled,
+                "IsEnabled": enabled,
                 "SessionCode": utils.load_stored_session()
             }
         }

{py4heappe-2.1.1 → py4heappe-2.2.0}/src/py4heappe/heappe_v5/cli/configuration.py

@@ -6,7 +6,7 @@ import validators
 import py4heappe.heappe_v5.core as hp
 import py4heappe.heappe_v5.core.base.utils as utils
 from py4heappe.heappe_v5.core.base import exceptions
-
+from urllib.parse import urlparse
 
 app = typer.Typer(name="HEAppEConfigurationCLI", no_args_is_help=True, pretty_exceptions_show_locals=False)
 
@@ -46,15 +46,24 @@ def environment_preparation():
             return
 
     url = typer.prompt("Enter the HEAppE instance address (for example: https://heappe.domain.cz/production)")
-    if not validators.url(url):
+
+    normalized = url
+    parsed = urlparse(normalized)
+    if not parsed.scheme:
+        normalized = "http://" + normalized
+        parsed = urlparse(normalized)
+
+    host = parsed.hostname
+
+    if not validators.url(normalized) and host not in ("localhost", "127.0.0.1"):
         raise exceptions.Py4HEAppEInternalException("The provided HEAppE URL is not valid.") from None
-    
-    if "/swagger/index.html" in url:
-        url = url.replace("/swagger/index.html", "")
+
+    if "/swagger/index.html" in normalized:
+        normalized = normalized.replace("/swagger/index.html", "")
 
     computationalProject = typer.prompt("Enter HEAppE accounting string", confirmation_prompt=True)
 
-    dotenv.set_key(os.path.join(os.path.dirname(__file__), '.env'), "url", url)
+    dotenv.set_key(os.path.join(os.path.dirname(__file__), '.env'), "url", normalized)
     dotenv.set_key(os.path.join(os.path.dirname(__file__), '.env'), "project", computationalProject)
 
     utils.print_and_log("Py4HEAppE is configured.")

{py4heappe-2.1.1 → py4heappe-2.2.0}/src/py4heappe/heappe_v5/cli/information.py

@@ -15,7 +15,7 @@ app = typer.Typer(name="HEAppEInfoCLI", no_args_is_help=True, pretty_exceptions_
 
 def get_hpc_project():
     try:
-        utils.print_and_log("Fetching computational project ...")
+        utils.log_info("Fetching computational project ...")
         parameters = {
             "_preload_content": False,
             "SessionCode": utils.load_stored_session()
@@ -77,7 +77,6 @@ def get_cluster_information(clusterName:str = typer.Option(None, help='Cluster n
                             commandTemplateName:str = typer.Option(None, help='Command template name')):
     """Cluster information"""
     try:
-        print(accountingString)
         utils.print_and_log("Fetching cluster information ...")
         parameters = {
             "_preload_content": False,