PAROS 2.0.0__tar.gz → 2.1.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (30) hide show
  1. {paros-2.0.0 → paros-2.1.0}/.github/workflows/ci.yml +22 -8
  2. {paros-2.0.0 → paros-2.1.0}/.github/workflows/release.yml +8 -8
  3. paros-2.1.0/CODEOWNERS +1 -0
  4. {paros-2.0.0 → paros-2.1.0}/PAROS/eyephantom.py +5 -4
  5. {paros-2.0.0 → paros-2.1.0}/PAROS/fundscale.py +288 -178
  6. {paros-2.0.0 → paros-2.1.0}/PKG-INFO +45 -11
  7. paros-2.1.0/README.md +93 -0
  8. paros-2.1.0/docs/refraction-and-vergence.md +34 -0
  9. paros-2.1.0/docs/telecentric-camera.md +56 -0
  10. {paros-2.0.0 → paros-2.1.0}/examples/calculate_ocular_magnification.ipynb +7 -3
  11. {paros-2.0.0 → paros-2.1.0}/examples/fundus_camera_calibration.ipynb +6 -7
  12. {paros-2.0.0 → paros-2.1.0}/pyproject.toml +22 -6
  13. paros-2.1.0/renovate.json +22 -0
  14. paros-2.1.0/tests/__init__.py +0 -0
  15. paros-2.1.0/tests/test_fundscale.py +47 -0
  16. {paros-2.0.0 → paros-2.1.0}/uv.lock +44 -4
  17. paros-2.0.0/README.md +0 -60
  18. {paros-2.0.0 → paros-2.1.0}/.github/assets/screenshot.png +0 -0
  19. {paros-2.0.0 → paros-2.1.0}/.gitignore +0 -0
  20. {paros-2.0.0 → paros-2.1.0}/CITATION.cff +0 -0
  21. {paros-2.0.0 → paros-2.1.0}/CONTRIBUTING.md +0 -0
  22. {paros-2.0.0 → paros-2.1.0}/LICENSE +0 -0
  23. {paros-2.0.0 → paros-2.1.0}/PAROS/__init__.py +0 -0
  24. {paros-2.0.0 → paros-2.1.0}/PAROS/data/__init__.py +0 -0
  25. {paros-2.0.0 → paros-2.1.0}/PAROS/data/calibration/Topcon/TRC_50DX.csv +0 -0
  26. {paros-2.0.0 → paros-2.1.0}/PAROS/data/calibration/Topcon/TRC_50IX.csv +0 -0
  27. {paros-2.0.0 → paros-2.1.0}/PAROS/data/calibration/__init__.py +0 -0
  28. {paros-2.0.0 → paros-2.1.0}/PAROS/data/lenses/__init__.py +0 -0
  29. {paros-2.0.0 → paros-2.1.0}/PAROS/data/lenses/phantom.csv +0 -0
  30. {paros-2.0.0 → paros-2.1.0}/ruff_defaults.toml +0 -0
{paros-2.0.0 → paros-2.1.0}/.github/workflows/ci.yml RENAMED
@@ -8,12 +8,12 @@ jobs:
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  runs-on: ubuntu-latest
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  strategy:
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  matrix:
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- python: &python-versions ["3.10", "3.11", "3.12"]
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+ python: &python-versions ["3.10", "3.11", "3.12", "3.13", "3.14"]
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  steps:
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- - uses: actions/checkout@v6
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+ - uses: actions/checkout@v7
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  - name: Set up uv
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  id: setup-uv
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- uses: astral-sh/setup-uv@v7
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+ uses: astral-sh/setup-uv@v10.3.3
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  - name: Build PAROS
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  run: uvx --python ${{ matrix.python }} hatch build
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@@ -21,13 +21,27 @@ jobs:
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  name: Format and lint
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  runs-on: ubuntu-latest
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  steps:
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- - uses: actions/checkout@v6
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+ - uses: actions/checkout@v7
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  - name: Set up uv
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  id: setup-uv
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- uses: astral-sh/setup-uv@v7
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+ uses: astral-sh/setup-uv@v10.3.3
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  - name: Format and lint
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- run: uvx hatch fmt --check
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+ run: uvx hatch check
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+ test:
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+ name: Run tests
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+ runs-on: ubuntu-latest
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+ strategy:
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+ matrix:
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+ python: *python-versions
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+ steps:
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+ - uses: actions/checkout@v7
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+ - name: Set up uv
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+ id: setup-uv
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+ uses: astral-sh/setup-uv@v10.3.3
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+ - name: Run tests
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+ run: uvx --python ${{ matrix.python }} hatch test
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+
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  jupyter:
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  name: Test Jupyter notebooks
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  runs-on: ubuntu-latest
@@ -35,9 +49,9 @@ jobs:
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  matrix:
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  python: *python-versions
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  steps:
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- - uses: actions/checkout@v6
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+ - uses: actions/checkout@v7
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  - name: Set up uv
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  id: setup-uv
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- uses: astral-sh/setup-uv@v7
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+ uses: astral-sh/setup-uv@v10.3.3
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  - name: Format and lint
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  run: uvx --python ${{ matrix.python }} hatch run jupyter:run-all
{paros-2.0.0 → paros-2.1.0}/.github/workflows/release.yml RENAMED
@@ -15,14 +15,14 @@ jobs:
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  contents: read
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  steps:
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- - uses: actions/checkout@v6
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+ - uses: actions/checkout@v7
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  - name: Set up uv
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  id: setup-uv
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- uses: astral-sh/setup-uv@v7
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+ uses: astral-sh/setup-uv@v10.3.3
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  - name: Build package
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  run: uv build
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  - name: Upload dist
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- uses: actions/upload-artifact@v6
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+ uses: actions/upload-artifact@v7
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  with:
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  name: paros_dist
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  path: "dist/"
@@ -38,13 +38,13 @@ jobs:
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  steps:
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  - name: Download dist
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- uses: actions/download-artifact@v7
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+ uses: actions/download-artifact@v8
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  with:
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  name: paros_dist
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  path: dist
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  - name: Set up uv
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  id: setup-uv
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- uses: astral-sh/setup-uv@v7
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+ uses: astral-sh/setup-uv@v10.3.3
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  - name: Publish package
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  run: uv publish
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@@ -59,18 +59,18 @@ jobs:
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  steps:
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  - name: Download dist
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- uses: actions/download-artifact@v7
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+ uses: actions/download-artifact@v8
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  with:
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  name: paros_dist
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  path: dist
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  - name: Upload wheels to GitHub release
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- uses: svenstaro/upload-release-action@2.11.3
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+ uses: svenstaro/upload-release-action@2.11.5
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  with:
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  tag: ${{ github.ref }}
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  file: "dist/*.whl"
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  file_glob: true
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  - name: Upload dist to GitHub release
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- uses: svenstaro/upload-release-action@2.11.3
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+ uses: svenstaro/upload-release-action@2.11.5
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  with:
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  tag: ${{ github.ref }}
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  file: "dist/*.tar.gz"
paros-2.1.0/CODEOWNERS ADDED
@@ -0,0 +1 @@
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+ * @MREYE-LUMC/maintainers @jwmbeenakker @ljpors
{paros-2.0.0 → paros-2.1.0}/PAROS/eyephantom.py RENAMED
@@ -8,13 +8,14 @@ This module can be used in conjunction with `PAROS.fundscale` to calculate the c
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  from __future__ import annotations
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- from typing import Literal
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-
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- import pandas as pd
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- import sympy as sp
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+ from typing import TYPE_CHECKING, Literal
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  from PAROS.fundscale import spherical_interface, uniform_medium
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+ if TYPE_CHECKING:
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+ import pandas as pd
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+ import sympy as sp
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+
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  class Lens:
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  """Ray transfer model of a lens."""