MoleditPy-linux 1.16.1a1__tar.gz → 1.16.1a3__tar.gz

{moleditpy_linux-1.16.1a1 → moleditpy_linux-1.16.1a3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: MoleditPy-linux
-Version: 1.16.1a1
+Version: 1.16.1a3
 Summary: A cross-platform, simple, and intuitive molecular structure editor built in Python. It allows 2D molecular drawing and 3D structure visualization. It supports exporting structure files for input to DFT calculation software.
 Author-email: HiroYokoyama <titech.yoko.hiro@gmail.com>
 Project-URL: Homepage, https://github.com/HiroYokoyama/python_molecular_editor

{moleditpy_linux-1.16.1a1 → moleditpy_linux-1.16.1a3}/pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
 [project]
 name = "MoleditPy-linux"
 
-version = "1.16.1a1"
+version = "1.16.1a3"
 
 authors = [
   { name="HiroYokoyama", email="titech.yoko.hiro@gmail.com" },
@@ -38,6 +38,7 @@ dependencies = [
     "rdkit < 2025.10",
 ]
 
+
 [project.urls]
 Homepage = "https://github.com/HiroYokoyama/python_molecular_editor"
 Issues = "https://github.com/HiroYokoyama/python_molecular_editor/issues"
@@ -46,5 +47,5 @@ Issues = "https://github.com/HiroYokoyama/python_molecular_editor/issues"
 moleditpy = "moleditpy_linux.__main__:main"
 
 [tool.setuptools.package-data]
-"moleditpy" = ["modules/assets/*"]
+"moleditpy_linux" = ["modules/assets/*"]
 

{moleditpy_linux-1.16.1a1 → moleditpy_linux-1.16.1a3}/src/MoleditPy_linux.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: MoleditPy-linux
-Version: 1.16.1a1
+Version: 1.16.1a3
 Summary: A cross-platform, simple, and intuitive molecular structure editor built in Python. It allows 2D molecular drawing and 3D structure visualization. It supports exporting structure files for input to DFT calculation software.
 Author-email: HiroYokoyama <titech.yoko.hiro@gmail.com>
 Project-URL: Homepage, https://github.com/HiroYokoyama/python_molecular_editor

moleditpy_linux-1.16.1a3/src/MoleditPy_linux.egg-info/SOURCES.txt

@@ -0,0 +1,57 @@
+README.md
+pyproject.toml
+src/MoleditPy_linux.egg-info/PKG-INFO
+src/MoleditPy_linux.egg-info/SOURCES.txt
+src/MoleditPy_linux.egg-info/dependency_links.txt
+src/MoleditPy_linux.egg-info/entry_points.txt
+src/MoleditPy_linux.egg-info/requires.txt
+src/MoleditPy_linux.egg-info/top_level.txt
+src/moleditpy_linux/__init__.py
+src/moleditpy_linux/__main__.py
+src/moleditpy_linux/main.py
+src/moleditpy_linux/modules/__init__.py
+src/moleditpy_linux/modules/about_dialog.py
+src/moleditpy_linux/modules/align_plane_dialog.py
+src/moleditpy_linux/modules/alignment_dialog.py
+src/moleditpy_linux/modules/analysis_window.py
+src/moleditpy_linux/modules/angle_dialog.py
+src/moleditpy_linux/modules/atom_item.py
+src/moleditpy_linux/modules/bond_item.py
+src/moleditpy_linux/modules/bond_length_dialog.py
+src/moleditpy_linux/modules/calculation_worker.py
+src/moleditpy_linux/modules/color_settings_dialog.py
+src/moleditpy_linux/modules/constants.py
+src/moleditpy_linux/modules/constrained_optimization_dialog.py
+src/moleditpy_linux/modules/custom_interactor_style.py
+src/moleditpy_linux/modules/custom_qt_interactor.py
+src/moleditpy_linux/modules/dialog3_d_picking_mixin.py
+src/moleditpy_linux/modules/dihedral_dialog.py
+src/moleditpy_linux/modules/main_window.py
+src/moleditpy_linux/modules/main_window_app_state.py
+src/moleditpy_linux/modules/main_window_compute.py
+src/moleditpy_linux/modules/main_window_dialog_manager.py
+src/moleditpy_linux/modules/main_window_edit_3d.py
+src/moleditpy_linux/modules/main_window_edit_actions.py
+src/moleditpy_linux/modules/main_window_export.py
+src/moleditpy_linux/modules/main_window_main_init.py
+src/moleditpy_linux/modules/main_window_molecular_parsers.py
+src/moleditpy_linux/modules/main_window_project_io.py
+src/moleditpy_linux/modules/main_window_string_importers.py
+src/moleditpy_linux/modules/main_window_ui_manager.py
+src/moleditpy_linux/modules/main_window_view_3d.py
+src/moleditpy_linux/modules/main_window_view_loaders.py
+src/moleditpy_linux/modules/mirror_dialog.py
+src/moleditpy_linux/modules/molecular_data.py
+src/moleditpy_linux/modules/molecule_scene.py
+src/moleditpy_linux/modules/move_group_dialog.py
+src/moleditpy_linux/modules/periodic_table_dialog.py
+src/moleditpy_linux/modules/planarize_dialog.py
+src/moleditpy_linux/modules/settings_dialog.py
+src/moleditpy_linux/modules/template_preview_item.py
+src/moleditpy_linux/modules/template_preview_view.py
+src/moleditpy_linux/modules/translation_dialog.py
+src/moleditpy_linux/modules/user_template_dialog.py
+src/moleditpy_linux/modules/zoomable_view.py
+src/moleditpy_linux/modules/assets/icon.icns
+src/moleditpy_linux/modules/assets/icon.ico
+src/moleditpy_linux/modules/assets/icon.png

moleditpy_linux-1.16.1a3/src/MoleditPy_linux.egg-info/top_level.txt

@@ -0,0 +1 @@
+moleditpy_linux

{moleditpy_linux-1.16.1a1/src/moleditpy-linux → moleditpy_linux-1.16.1a3/src/moleditpy_linux}/modules/constants.py

@@ -4,7 +4,7 @@ from PyQt6.QtGui import QFont, QColor
 from rdkit import Chem
 
 #Version
-VERSION = '1.16.1a1'
+VERSION = '1.16.1a3'
 
 ATOM_RADIUS = 18
 BOND_OFFSET = 3.5

{moleditpy_linux-1.16.1a1/src/moleditpy-linux → moleditpy_linux-1.16.1a3/src/moleditpy_linux}/modules/main_window_main_init.py

@@ -51,16 +51,15 @@ def detect_system_dark_mode():
     macOS (defaults read), and GNOME/GTK-based Linux (gsettings). Return
     None if no reliable information is available.
     """
-    try:
-        # Windows: read registry AppsUseLightTheme (0 = dark, 1 = light)
-        if platform.system() == 'Windows' and winreg is not None:
-            try:
-                with winreg.OpenKey(winreg.HKEY_CURRENT_USER,
-                                    r'Software\Microsoft\Windows\CurrentVersion\Themes\Personalize') as k:
-                    val, _ = winreg.QueryValueEx(k, 'AppsUseLightTheme')
-                    return False if int(val) == 0 else True
-            except Exception:
-                pass
+    # Delegate detailed OS detection to `detect_system_theme` and map
+    # 'dark' -> True, 'light' -> False. This avoids duplicating the
+    # registry and subprocess calls in two places.
+    theme = detect_system_theme()
+    if theme == 'dark':
+        return True
+    if theme == 'light':
+        return False
+    return None
 
 def detect_system_theme():
     """OSの優先テーマ設定を 'dark', 'light', または None として返す。
@@ -80,6 +79,8 @@ def detect_system_theme():
 
         # macOS: 'defaults read -g AppleInterfaceStyle'
         if platform.system() == 'Darwin':
+            return 'light'
+            '''
             try:
                 # 'defaults read ...' が成功すればダークモード
                 p = subprocess.run(
@@ -95,6 +96,7 @@ def detect_system_theme():
             except Exception:
                 # その他のエラー
                 pass
+            '''
 
         # Linux / GNOME: try color-scheme gsetting; fallback to gtk-theme detection
         if platform.system() == 'Linux':
@@ -103,16 +105,16 @@ def detect_system_theme():
                 if p.returncode == 0:
                     out = p.stdout.strip().strip("'\n ")
                     if 'dark' in out.lower():
-                        return True
+                        return 'dark'
                     if 'light' in out.lower():
-                        return False
+                        return 'light'
             except Exception:
                 pass
 
             try:
                 p = subprocess.run(['gsettings', 'get', 'org.gnome.desktop.interface', 'gtk-theme'], capture_output=True, text=True)
                 if p.returncode == 0 and '-dark' in p.stdout.lower():
-                    return True
+                    return 'dark'
             except Exception:
                 pass
     except Exception:
@@ -236,8 +238,8 @@ class MainWindowMainInit(object):
         self.atom_selection_mode = False
         self.selected_atom_actors = []
         
-        # 3D編集用の原子選択状態
-        self.selected_atoms_3d = set()  # 3Dビューで選択された原子のインデックス
+        # 3D編集用の原子選択状態 (3Dビューで選択された原子のインデックス)
+        self.selected_atoms_3d = set()
         
         # 3D編集ダイアログの参照を保持
         self.active_3d_dialogs = []
@@ -495,11 +497,10 @@ class MainWindowMainInit(object):
         def _icon_foreground_color():
             """Return a QColor for icon foreground.
 
-            NOTE: this application inverts the usual foreground mapping so icons
-            will be the *opposite* color to the background (i.e., black on dark
-            backgrounds, white on light backgrounds). This intentionally reverses
-            the previous behavior so button icons don't blend into the 3D-view
-            background. Priority: explicit setting in 'icon_foreground' -> OS
+            NOTE: choose icon foreground to contrast against the background
+            (i.e., white on dark backgrounds, black on light backgrounds). This
+            matches common conventions. Priority: explicit setting in
+            'icon_foreground' -> OS theme preference -> configured 3D
             theme preference -> configured 3D background -> application palette.
             """
             try:
@@ -514,9 +515,9 @@ class MainWindowMainInit(object):
             # 1) Prefer the system/OS dark-mode preference if available.
             try:
                 os_pref = detect_system_dark_mode()
-                # Invert the color so in dark-pref OS we return black, in light we return white
+                # Standard mapping: dark -> white, light -> black
                 if os_pref is not None:
-                    return QColor('#000000') if os_pref else QColor('#FFFFFF')
+                    return QColor('#FFFFFF') if os_pref else QColor('#000000')
             except Exception:
                 pass
 
@@ -528,8 +529,8 @@ class MainWindowMainInit(object):
                     bg = QColor(bg_hex)
                     if bg.isValid():
                         lum = 0.2126 * bg.redF() + 0.7152 * bg.greenF() + 0.0722 * bg.blueF()
-                        # Inverted: return black on dark (lum<0.5), white on light
-                        return QColor('#000000') if lum < 0.5 else QColor('#FFFFFF')
+                        # Return white on dark (lum<0.5), black on light
+                        return QColor('#FFFFFF') if lum < 0.5 else QColor('#000000')
             except Exception:
                 pass
 
@@ -538,8 +539,8 @@ class MainWindowMainInit(object):
                 # palette.window() returns a QBrush; call color()
                 window_bg = pal.window().color()
                 lum = 0.2126 * window_bg.redF() + 0.7152 * window_bg.greenF() + 0.0722 * window_bg.blueF()
-                # Inverted mapping for palette fallback
-                return QColor('#000000') if lum < 0.5 else QColor('#FFFFFF')
+                # Palette-based mapping: white on dark palette background
+                return QColor('#FFFFFF') if lum < 0.5 else QColor('#000000')
             except Exception:
                 return QColor('#000000')
 

moleditpy_linux-1.16.1a1/src/MoleditPy_linux.egg-info/SOURCES.txt

@@ -1,54 +0,0 @@
-README.md
-pyproject.toml
-src/MoleditPy_linux.egg-info/PKG-INFO
-src/MoleditPy_linux.egg-info/SOURCES.txt
-src/MoleditPy_linux.egg-info/dependency_links.txt
-src/MoleditPy_linux.egg-info/entry_points.txt
-src/MoleditPy_linux.egg-info/requires.txt
-src/MoleditPy_linux.egg-info/top_level.txt
-src/moleditpy-linux/__init__.py
-src/moleditpy-linux/__main__.py
-src/moleditpy-linux/main.py
-src/moleditpy-linux/modules/__init__.py
-src/moleditpy-linux/modules/about_dialog.py
-src/moleditpy-linux/modules/align_plane_dialog.py
-src/moleditpy-linux/modules/alignment_dialog.py
-src/moleditpy-linux/modules/analysis_window.py
-src/moleditpy-linux/modules/angle_dialog.py
-src/moleditpy-linux/modules/atom_item.py
-src/moleditpy-linux/modules/bond_item.py
-src/moleditpy-linux/modules/bond_length_dialog.py
-src/moleditpy-linux/modules/calculation_worker.py
-src/moleditpy-linux/modules/color_settings_dialog.py
-src/moleditpy-linux/modules/constants.py
-src/moleditpy-linux/modules/constrained_optimization_dialog.py
-src/moleditpy-linux/modules/custom_interactor_style.py
-src/moleditpy-linux/modules/custom_qt_interactor.py
-src/moleditpy-linux/modules/dialog3_d_picking_mixin.py
-src/moleditpy-linux/modules/dihedral_dialog.py
-src/moleditpy-linux/modules/main_window.py
-src/moleditpy-linux/modules/main_window_app_state.py
-src/moleditpy-linux/modules/main_window_compute.py
-src/moleditpy-linux/modules/main_window_dialog_manager.py
-src/moleditpy-linux/modules/main_window_edit_3d.py
-src/moleditpy-linux/modules/main_window_edit_actions.py
-src/moleditpy-linux/modules/main_window_export.py
-src/moleditpy-linux/modules/main_window_main_init.py
-src/moleditpy-linux/modules/main_window_molecular_parsers.py
-src/moleditpy-linux/modules/main_window_project_io.py
-src/moleditpy-linux/modules/main_window_string_importers.py
-src/moleditpy-linux/modules/main_window_ui_manager.py
-src/moleditpy-linux/modules/main_window_view_3d.py
-src/moleditpy-linux/modules/main_window_view_loaders.py
-src/moleditpy-linux/modules/mirror_dialog.py
-src/moleditpy-linux/modules/molecular_data.py
-src/moleditpy-linux/modules/molecule_scene.py
-src/moleditpy-linux/modules/move_group_dialog.py
-src/moleditpy-linux/modules/periodic_table_dialog.py
-src/moleditpy-linux/modules/planarize_dialog.py
-src/moleditpy-linux/modules/settings_dialog.py
-src/moleditpy-linux/modules/template_preview_item.py
-src/moleditpy-linux/modules/template_preview_view.py
-src/moleditpy-linux/modules/translation_dialog.py
-src/moleditpy-linux/modules/user_template_dialog.py
-src/moleditpy-linux/modules/zoomable_view.py

moleditpy_linux-1.16.1a1/src/MoleditPy_linux.egg-info/top_level.txt

@@ -1 +0,0 @@
-moleditpy-linux