MoleditPy-linux 1.16.1__tar.gz → 1.16.1a2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (61) hide show
  1. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/PKG-INFO +1 -1
  2. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/pyproject.toml +2 -3
  3. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/src/MoleditPy_linux.egg-info/PKG-INFO +1 -1
  4. moleditpy_linux-1.16.1a2/src/MoleditPy_linux.egg-info/SOURCES.txt +54 -0
  5. moleditpy_linux-1.16.1a2/src/MoleditPy_linux.egg-info/top_level.txt +1 -0
  6. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/constants.py +1 -1
  7. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_main_init.py +11 -13
  8. moleditpy_linux-1.16.1/src/MoleditPy_linux.egg-info/SOURCES.txt +0 -57
  9. moleditpy_linux-1.16.1/src/MoleditPy_linux.egg-info/top_level.txt +0 -1
  10. moleditpy_linux-1.16.1/src/moleditpy_linux/modules/assets/icon.icns +0 -0
  11. moleditpy_linux-1.16.1/src/moleditpy_linux/modules/assets/icon.ico +0 -0
  12. moleditpy_linux-1.16.1/src/moleditpy_linux/modules/assets/icon.png +0 -0
  13. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/README.md +0 -0
  14. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/setup.cfg +0 -0
  15. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/src/MoleditPy_linux.egg-info/dependency_links.txt +0 -0
  16. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/src/MoleditPy_linux.egg-info/entry_points.txt +0 -0
  17. {moleditpy_linux-1.16.1 → moleditpy_linux-1.16.1a2}/src/MoleditPy_linux.egg-info/requires.txt +0 -0
  18. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/__init__.py +0 -0
  19. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/__main__.py +0 -0
  20. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/main.py +0 -0
  21. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/__init__.py +0 -0
  22. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/about_dialog.py +0 -0
  23. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/align_plane_dialog.py +0 -0
  24. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/alignment_dialog.py +0 -0
  25. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/analysis_window.py +0 -0
  26. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/angle_dialog.py +0 -0
  27. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/atom_item.py +0 -0
  28. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/bond_item.py +0 -0
  29. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/bond_length_dialog.py +0 -0
  30. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/calculation_worker.py +0 -0
  31. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/color_settings_dialog.py +0 -0
  32. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/constrained_optimization_dialog.py +0 -0
  33. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/custom_interactor_style.py +0 -0
  34. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/custom_qt_interactor.py +0 -0
  35. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/dialog3_d_picking_mixin.py +0 -0
  36. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/dihedral_dialog.py +0 -0
  37. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window.py +0 -0
  38. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_app_state.py +0 -0
  39. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_compute.py +0 -0
  40. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_dialog_manager.py +0 -0
  41. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_edit_3d.py +0 -0
  42. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_edit_actions.py +0 -0
  43. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_export.py +0 -0
  44. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_molecular_parsers.py +0 -0
  45. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_project_io.py +0 -0
  46. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_string_importers.py +0 -0
  47. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_ui_manager.py +0 -0
  48. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_view_3d.py +0 -0
  49. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/main_window_view_loaders.py +0 -0
  50. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/mirror_dialog.py +0 -0
  51. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/molecular_data.py +0 -0
  52. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/molecule_scene.py +0 -0
  53. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/move_group_dialog.py +0 -0
  54. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/periodic_table_dialog.py +0 -0
  55. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/planarize_dialog.py +0 -0
  56. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/settings_dialog.py +0 -0
  57. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/template_preview_item.py +0 -0
  58. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/template_preview_view.py +0 -0
  59. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/translation_dialog.py +0 -0
  60. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/user_template_dialog.py +0 -0
  61. {moleditpy_linux-1.16.1/src/moleditpy_linux → moleditpy_linux-1.16.1a2/src/moleditpy-linux}/modules/zoomable_view.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: MoleditPy-linux
3
- Version: 1.16.1
3
+ Version: 1.16.1a2
4
4
  Summary: A cross-platform, simple, and intuitive molecular structure editor built in Python. It allows 2D molecular drawing and 3D structure visualization. It supports exporting structure files for input to DFT calculation software.
5
5
  Author-email: HiroYokoyama <titech.yoko.hiro@gmail.com>
6
6
  Project-URL: Homepage, https://github.com/HiroYokoyama/python_molecular_editor
@@ -5,7 +5,7 @@ build-backend = "setuptools.build_meta"
5
5
  [project]
6
6
  name = "MoleditPy-linux"
7
7
 
8
- version = "1.16.1"
8
+ version = "1.16.1a2"
9
9
 
10
10
  authors = [
11
11
  { name="HiroYokoyama", email="titech.yoko.hiro@gmail.com" },
@@ -38,7 +38,6 @@ dependencies = [
38
38
  "rdkit < 2025.10",
39
39
  ]
40
40
 
41
-
42
41
  [project.urls]
43
42
  Homepage = "https://github.com/HiroYokoyama/python_molecular_editor"
44
43
  Issues = "https://github.com/HiroYokoyama/python_molecular_editor/issues"
@@ -47,5 +46,5 @@ Issues = "https://github.com/HiroYokoyama/python_molecular_editor/issues"
47
46
  moleditpy = "moleditpy_linux.__main__:main"
48
47
 
49
48
  [tool.setuptools.package-data]
50
- "moleditpy_linux" = ["modules/assets/*"]
49
+ "moleditpy" = ["modules/assets/*"]
51
50
 
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: MoleditPy-linux
3
- Version: 1.16.1
3
+ Version: 1.16.1a2
4
4
  Summary: A cross-platform, simple, and intuitive molecular structure editor built in Python. It allows 2D molecular drawing and 3D structure visualization. It supports exporting structure files for input to DFT calculation software.
5
5
  Author-email: HiroYokoyama <titech.yoko.hiro@gmail.com>
6
6
  Project-URL: Homepage, https://github.com/HiroYokoyama/python_molecular_editor
@@ -0,0 +1,54 @@
1
+ README.md
2
+ pyproject.toml
3
+ src/MoleditPy_linux.egg-info/PKG-INFO
4
+ src/MoleditPy_linux.egg-info/SOURCES.txt
5
+ src/MoleditPy_linux.egg-info/dependency_links.txt
6
+ src/MoleditPy_linux.egg-info/entry_points.txt
7
+ src/MoleditPy_linux.egg-info/requires.txt
8
+ src/MoleditPy_linux.egg-info/top_level.txt
9
+ src/moleditpy-linux/__init__.py
10
+ src/moleditpy-linux/__main__.py
11
+ src/moleditpy-linux/main.py
12
+ src/moleditpy-linux/modules/__init__.py
13
+ src/moleditpy-linux/modules/about_dialog.py
14
+ src/moleditpy-linux/modules/align_plane_dialog.py
15
+ src/moleditpy-linux/modules/alignment_dialog.py
16
+ src/moleditpy-linux/modules/analysis_window.py
17
+ src/moleditpy-linux/modules/angle_dialog.py
18
+ src/moleditpy-linux/modules/atom_item.py
19
+ src/moleditpy-linux/modules/bond_item.py
20
+ src/moleditpy-linux/modules/bond_length_dialog.py
21
+ src/moleditpy-linux/modules/calculation_worker.py
22
+ src/moleditpy-linux/modules/color_settings_dialog.py
23
+ src/moleditpy-linux/modules/constants.py
24
+ src/moleditpy-linux/modules/constrained_optimization_dialog.py
25
+ src/moleditpy-linux/modules/custom_interactor_style.py
26
+ src/moleditpy-linux/modules/custom_qt_interactor.py
27
+ src/moleditpy-linux/modules/dialog3_d_picking_mixin.py
28
+ src/moleditpy-linux/modules/dihedral_dialog.py
29
+ src/moleditpy-linux/modules/main_window.py
30
+ src/moleditpy-linux/modules/main_window_app_state.py
31
+ src/moleditpy-linux/modules/main_window_compute.py
32
+ src/moleditpy-linux/modules/main_window_dialog_manager.py
33
+ src/moleditpy-linux/modules/main_window_edit_3d.py
34
+ src/moleditpy-linux/modules/main_window_edit_actions.py
35
+ src/moleditpy-linux/modules/main_window_export.py
36
+ src/moleditpy-linux/modules/main_window_main_init.py
37
+ src/moleditpy-linux/modules/main_window_molecular_parsers.py
38
+ src/moleditpy-linux/modules/main_window_project_io.py
39
+ src/moleditpy-linux/modules/main_window_string_importers.py
40
+ src/moleditpy-linux/modules/main_window_ui_manager.py
41
+ src/moleditpy-linux/modules/main_window_view_3d.py
42
+ src/moleditpy-linux/modules/main_window_view_loaders.py
43
+ src/moleditpy-linux/modules/mirror_dialog.py
44
+ src/moleditpy-linux/modules/molecular_data.py
45
+ src/moleditpy-linux/modules/molecule_scene.py
46
+ src/moleditpy-linux/modules/move_group_dialog.py
47
+ src/moleditpy-linux/modules/periodic_table_dialog.py
48
+ src/moleditpy-linux/modules/planarize_dialog.py
49
+ src/moleditpy-linux/modules/settings_dialog.py
50
+ src/moleditpy-linux/modules/template_preview_item.py
51
+ src/moleditpy-linux/modules/template_preview_view.py
52
+ src/moleditpy-linux/modules/translation_dialog.py
53
+ src/moleditpy-linux/modules/user_template_dialog.py
54
+ src/moleditpy-linux/modules/zoomable_view.py
@@ -4,7 +4,7 @@ from PyQt6.QtGui import QFont, QColor
4
4
  from rdkit import Chem
5
5
 
6
6
  #Version
7
- VERSION = '1.16.1'
7
+ VERSION = '1.16.1a2'
8
8
 
9
9
  ATOM_RADIUS = 18
10
10
  BOND_OFFSET = 3.5
@@ -79,8 +79,6 @@ def detect_system_theme():
79
79
 
80
80
  # macOS: 'defaults read -g AppleInterfaceStyle'
81
81
  if platform.system() == 'Darwin':
82
- return 'light'
83
- '''
84
82
  try:
85
83
  # 'defaults read ...' が成功すればダークモード
86
84
  p = subprocess.run(
@@ -96,7 +94,6 @@ def detect_system_theme():
96
94
  except Exception:
97
95
  # その他のエラー
98
96
  pass
99
- '''
100
97
 
101
98
  # Linux / GNOME: try color-scheme gsetting; fallback to gtk-theme detection
102
99
  if platform.system() == 'Linux':
@@ -497,10 +494,11 @@ class MainWindowMainInit(object):
497
494
  def _icon_foreground_color():
498
495
  """Return a QColor for icon foreground.
499
496
 
500
- NOTE: choose icon foreground to contrast against the background
501
- (i.e., white on dark backgrounds, black on light backgrounds). This
502
- matches common conventions. Priority: explicit setting in
503
- 'icon_foreground' -> OS theme preference -> configured 3D
497
+ NOTE: this application inverts the usual foreground mapping so icons
498
+ will be the *opposite* color to the background (i.e., black on dark
499
+ backgrounds, white on light backgrounds). This intentionally reverses
500
+ the previous behavior so button icons don't blend into the 3D-view
501
+ background. Priority: explicit setting in 'icon_foreground' -> OS
504
502
  theme preference -> configured 3D background -> application palette.
505
503
  """
506
504
  try:
@@ -515,9 +513,9 @@ class MainWindowMainInit(object):
515
513
  # 1) Prefer the system/OS dark-mode preference if available.
516
514
  try:
517
515
  os_pref = detect_system_dark_mode()
518
- # Standard mapping: dark -> white, light -> black
516
+ # Invert the color so in dark-pref OS we return black, in light we return white
519
517
  if os_pref is not None:
520
- return QColor('#FFFFFF') if os_pref else QColor('#000000')
518
+ return QColor('#000000') if os_pref else QColor('#FFFFFF')
521
519
  except Exception:
522
520
  pass
523
521
 
@@ -529,8 +527,8 @@ class MainWindowMainInit(object):
529
527
  bg = QColor(bg_hex)
530
528
  if bg.isValid():
531
529
  lum = 0.2126 * bg.redF() + 0.7152 * bg.greenF() + 0.0722 * bg.blueF()
532
- # Return white on dark (lum<0.5), black on light
533
- return QColor('#FFFFFF') if lum < 0.5 else QColor('#000000')
530
+ # Inverted: return black on dark (lum<0.5), white on light
531
+ return QColor('#000000') if lum < 0.5 else QColor('#FFFFFF')
534
532
  except Exception:
535
533
  pass
536
534
 
@@ -539,8 +537,8 @@ class MainWindowMainInit(object):
539
537
  # palette.window() returns a QBrush; call color()
540
538
  window_bg = pal.window().color()
541
539
  lum = 0.2126 * window_bg.redF() + 0.7152 * window_bg.greenF() + 0.0722 * window_bg.blueF()
542
- # Palette-based mapping: white on dark palette background
543
- return QColor('#FFFFFF') if lum < 0.5 else QColor('#000000')
540
+ # Inverted mapping for palette fallback
541
+ return QColor('#000000') if lum < 0.5 else QColor('#FFFFFF')
544
542
  except Exception:
545
543
  return QColor('#000000')
546
544
 
@@ -1,57 +0,0 @@
1
- README.md
2
- pyproject.toml
3
- src/MoleditPy_linux.egg-info/PKG-INFO
4
- src/MoleditPy_linux.egg-info/SOURCES.txt
5
- src/MoleditPy_linux.egg-info/dependency_links.txt
6
- src/MoleditPy_linux.egg-info/entry_points.txt
7
- src/MoleditPy_linux.egg-info/requires.txt
8
- src/MoleditPy_linux.egg-info/top_level.txt
9
- src/moleditpy_linux/__init__.py
10
- src/moleditpy_linux/__main__.py
11
- src/moleditpy_linux/main.py
12
- src/moleditpy_linux/modules/__init__.py
13
- src/moleditpy_linux/modules/about_dialog.py
14
- src/moleditpy_linux/modules/align_plane_dialog.py
15
- src/moleditpy_linux/modules/alignment_dialog.py
16
- src/moleditpy_linux/modules/analysis_window.py
17
- src/moleditpy_linux/modules/angle_dialog.py
18
- src/moleditpy_linux/modules/atom_item.py
19
- src/moleditpy_linux/modules/bond_item.py
20
- src/moleditpy_linux/modules/bond_length_dialog.py
21
- src/moleditpy_linux/modules/calculation_worker.py
22
- src/moleditpy_linux/modules/color_settings_dialog.py
23
- src/moleditpy_linux/modules/constants.py
24
- src/moleditpy_linux/modules/constrained_optimization_dialog.py
25
- src/moleditpy_linux/modules/custom_interactor_style.py
26
- src/moleditpy_linux/modules/custom_qt_interactor.py
27
- src/moleditpy_linux/modules/dialog3_d_picking_mixin.py
28
- src/moleditpy_linux/modules/dihedral_dialog.py
29
- src/moleditpy_linux/modules/main_window.py
30
- src/moleditpy_linux/modules/main_window_app_state.py
31
- src/moleditpy_linux/modules/main_window_compute.py
32
- src/moleditpy_linux/modules/main_window_dialog_manager.py
33
- src/moleditpy_linux/modules/main_window_edit_3d.py
34
- src/moleditpy_linux/modules/main_window_edit_actions.py
35
- src/moleditpy_linux/modules/main_window_export.py
36
- src/moleditpy_linux/modules/main_window_main_init.py
37
- src/moleditpy_linux/modules/main_window_molecular_parsers.py
38
- src/moleditpy_linux/modules/main_window_project_io.py
39
- src/moleditpy_linux/modules/main_window_string_importers.py
40
- src/moleditpy_linux/modules/main_window_ui_manager.py
41
- src/moleditpy_linux/modules/main_window_view_3d.py
42
- src/moleditpy_linux/modules/main_window_view_loaders.py
43
- src/moleditpy_linux/modules/mirror_dialog.py
44
- src/moleditpy_linux/modules/molecular_data.py
45
- src/moleditpy_linux/modules/molecule_scene.py
46
- src/moleditpy_linux/modules/move_group_dialog.py
47
- src/moleditpy_linux/modules/periodic_table_dialog.py
48
- src/moleditpy_linux/modules/planarize_dialog.py
49
- src/moleditpy_linux/modules/settings_dialog.py
50
- src/moleditpy_linux/modules/template_preview_item.py
51
- src/moleditpy_linux/modules/template_preview_view.py
52
- src/moleditpy_linux/modules/translation_dialog.py
53
- src/moleditpy_linux/modules/user_template_dialog.py
54
- src/moleditpy_linux/modules/zoomable_view.py
55
- src/moleditpy_linux/modules/assets/icon.icns
56
- src/moleditpy_linux/modules/assets/icon.ico
57
- src/moleditpy_linux/modules/assets/icon.png
@@ -1 +0,0 @@
1
- moleditpy_linux