LineageTree 1.6.1__tar.gz → 1.8.0__tar.gz

{lineagetree-1.6.1/src/LineageTree.egg-info → lineagetree-1.8.0}/PKG-INFO

@@ -1,6 +1,6 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.2
 Name: LineageTree
-Version: 1.6.1
+Version: 1.8.0
 Summary: Lineage tree structure
 Home-page: https://github.com/leoguignard/LineageTree
 Author: Léo Guignard
@@ -59,6 +59,7 @@ With LineageTree you can read from:
 - MaMuT files described in [Wolff et al. 2018](https://doi.org/10.7554/eLife.34410)
 - SVF algorithm outputs described in [McDole, Guignard et al. 2018](https://doi.org/10.1016/j.cell.2018.09.031)
 - ASTEC algorithm outputs described in [Guignard, Fiuza et al. 2020](https://doi.org/10.1126/science.aar5663)
+- Data from the [Digital development Database](http://digital-development.org/index.html) described in [Du et al. 2014](https://www.cell.com/fulltext/S0092-8674(13)01542-0) and [Du et al. 2015](https://www.sciencedirect.com/science/article/pii/S1534580715004876?via%3Dihub)
 - and few others
 
 ## Basic usage

{lineagetree-1.6.1 → lineagetree-1.8.0}/README.md

@@ -8,6 +8,7 @@ With LineageTree you can read from:
 - MaMuT files described in [Wolff et al. 2018](https://doi.org/10.7554/eLife.34410)
 - SVF algorithm outputs described in [McDole, Guignard et al. 2018](https://doi.org/10.1016/j.cell.2018.09.031)
 - ASTEC algorithm outputs described in [Guignard, Fiuza et al. 2020](https://doi.org/10.1126/science.aar5663)
+- Data from the [Digital development Database](http://digital-development.org/index.html) described in [Du et al. 2014](https://www.cell.com/fulltext/S0092-8674(13)01542-0) and [Du et al. 2015](https://www.sciencedirect.com/science/article/pii/S1534580715004876?via%3Dihub)
 - and few others
 
 ## Basic usage

{lineagetree-1.6.1 → lineagetree-1.8.0}/pyproject.toml

@@ -10,7 +10,7 @@ profile = "black"
 line_length = 79
 
 [tool.bumpver]
-current_version = "1.6.1"
+current_version = "1.8.0"
 version_pattern = "MAJOR.MINOR.PATCH[-TAG]"
 commit_message = "bump version {old_version} -> {new_version}"
 commit = true
@@ -40,11 +40,15 @@ select = [
     "G", # flake8-logging-format
     "PIE", # flake8-pie
     "SIM", # flake8-simplify
+    "I", # imports
+    "T201", # print statements
+    "ERA001", #commented out code
 ]
 ignore = [
     "E501", # line too long. let black handle this
     "UP006", "UP007", # type annotation. As using magicgui require runtime type annotation then we disable this.
     "SIM117", # flake8-simplify - some of merged with statements are not looking great with black, reanble after drop python 3.9
+    "SIM300", # yoda conditions
 ]
 
 exclude = [

{lineagetree-1.6.1 → lineagetree-1.8.0}/src/LineageTree/__init__.py

@@ -1,4 +1,4 @@
-__version__ = "1.6.1"
+__version__ = "1.8.0"
 from .lineageTree import lineageTree
 from .lineageTreeManager import lineageTreeManager