IsoCor 2.2.3__tar.gz → 2.2.4__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/PKG-INFO +3 -1
- {isocor-2.2.3 → isocor-2.2.4}/PKG-INFO +3 -1
- {isocor-2.2.3 → isocor-2.2.4}/isocor/__init__.py +1 -1
- {isocor-2.2.3 → isocor-2.2.4}/isocor/ui/isocordb.py +4 -2
- {isocor-2.2.3 → isocor-2.2.4}/setup.cfg +2 -0
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/SOURCES.txt +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/dependency_links.txt +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/entry_points.txt +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/requires.txt +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/IsoCor.egg-info/top_level.txt +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/LICENSE.md +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/MANIFEST.in +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/README.md +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/__main__.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/base.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/data/Data_example.tsv +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/data/Derivatives.dat +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/data/Isotopes.dat +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/data/Metabolites.dat +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/mscorrectors.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/__init__.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/conftest.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_all_cases.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_correction_matrix_HighRes_resolved.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_correction_matrix_HighRes_unresolved.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_correction_matrix_LowRes.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_correction_process_HighRes.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_correction_process_LowRes.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_factory.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_isotopic_cluster_HighRes.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_isotopic_cluster_LowRes.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_m_min_constant.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/tests/test_m_min_orbitrap.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/ui/__init__.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/ui/isocorcli.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/isocor/ui/isocorgui.py +0 -0
- {isocor-2.2.3 → isocor-2.2.4}/pyproject.toml +0 -0
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: IsoCor
|
|
3
|
-
Version: 2.2.
|
|
3
|
+
Version: 2.2.4
|
|
4
4
|
Summary: IsoCor: Isotope Correction for mass spectrometry labeling experiments
|
|
5
5
|
Home-page: https://github.com/MetaSys-LISBP/IsoCor/
|
|
6
6
|
Author: Pierre Millard, Baudoin Délépine, Matthieu Guionnet
|
|
@@ -11,6 +11,8 @@ Classifier: Programming Language :: Python :: 3.9
|
|
|
11
11
|
Classifier: Programming Language :: Python :: 3.10
|
|
12
12
|
Classifier: Programming Language :: Python :: 3.11
|
|
13
13
|
Classifier: Programming Language :: Python :: 3.12
|
|
14
|
+
Classifier: Programming Language :: Python :: 3.13
|
|
15
|
+
Classifier: Programming Language :: Python :: 3.14
|
|
14
16
|
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
|
|
15
17
|
Classifier: Operating System :: OS Independent
|
|
16
18
|
Classifier: Intended Audience :: Science/Research
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: IsoCor
|
|
3
|
-
Version: 2.2.
|
|
3
|
+
Version: 2.2.4
|
|
4
4
|
Summary: IsoCor: Isotope Correction for mass spectrometry labeling experiments
|
|
5
5
|
Home-page: https://github.com/MetaSys-LISBP/IsoCor/
|
|
6
6
|
Author: Pierre Millard, Baudoin Délépine, Matthieu Guionnet
|
|
@@ -11,6 +11,8 @@ Classifier: Programming Language :: Python :: 3.9
|
|
|
11
11
|
Classifier: Programming Language :: Python :: 3.10
|
|
12
12
|
Classifier: Programming Language :: Python :: 3.11
|
|
13
13
|
Classifier: Programming Language :: Python :: 3.12
|
|
14
|
+
Classifier: Programming Language :: Python :: 3.13
|
|
15
|
+
Classifier: Programming Language :: Python :: 3.14
|
|
14
16
|
Classifier: License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
|
|
15
17
|
Classifier: Operating System :: OS Independent
|
|
16
18
|
Classifier: Intended Audience :: Science/Research
|
|
@@ -5,7 +5,7 @@ for conveniance.
|
|
|
5
5
|
"""
|
|
6
6
|
|
|
7
7
|
# Version number MUST be maintained here (x.y.z format)
|
|
8
|
-
__version__ = '2.2.
|
|
8
|
+
__version__ = '2.2.4'
|
|
9
9
|
|
|
10
10
|
from isocor.mscorrectors import MetaboliteCorrectorFactory
|
|
11
11
|
from isocor.mscorrectors import LowResMetaboliteCorrector, HighResMetaboliteCorrector
|
|
@@ -5,7 +5,8 @@ import isocor as hr
|
|
|
5
5
|
from decimal import Decimal
|
|
6
6
|
import shutil
|
|
7
7
|
import numpy as np
|
|
8
|
-
import pkg_resources
|
|
8
|
+
# import pkg_resources
|
|
9
|
+
import importlib.resources
|
|
9
10
|
|
|
10
11
|
|
|
11
12
|
class EnvComputing(object):
|
|
@@ -18,7 +19,8 @@ class EnvComputing(object):
|
|
|
18
19
|
self.home = Path(home)
|
|
19
20
|
self.default_db = Path(self.home, 'isocordb')
|
|
20
21
|
self.db_path = self.default_db
|
|
21
|
-
self.example_db = pkg_resources.resource_filename('isocor', 'data/')
|
|
22
|
+
# self.example_db = pkg_resources.resource_filename('isocor', 'data/')
|
|
23
|
+
self.example_db = importlib.resources.files('isocor').joinpath('data')
|
|
22
24
|
|
|
23
25
|
def initializeDB(self):
|
|
24
26
|
# if db files don't exist, copy the example folder
|
|
@@ -14,6 +14,8 @@ classifiers =
|
|
|
14
14
|
Programming Language :: Python :: 3.10
|
|
15
15
|
Programming Language :: Python :: 3.11
|
|
16
16
|
Programming Language :: Python :: 3.12
|
|
17
|
+
Programming Language :: Python :: 3.13
|
|
18
|
+
Programming Language :: Python :: 3.14
|
|
17
19
|
License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)
|
|
18
20
|
Operating System :: OS Independent
|
|
19
21
|
Intended Audience :: Science/Research
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|