FourCIPP 1.18.0__tar.gz → 1.20.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (66) hide show
  1. {fourcipp-1.18.0/src/FourCIPP.egg-info → fourcipp-1.20.0}/PKG-INFO +1 -1
  2. {fourcipp-1.18.0 → fourcipp-1.20.0}/requirements.txt +1 -4
  3. {fourcipp-1.18.0 → fourcipp-1.20.0/src/FourCIPP.egg-info}/PKG-INFO +1 -1
  4. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/config/4C_metadata.yaml +202 -10
  5. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/config/4C_schema.json +499 -15
  6. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/version.py +3 -3
  7. {fourcipp-1.18.0 → fourcipp-1.20.0}/.coveragerc +0 -0
  8. {fourcipp-1.18.0 → fourcipp-1.20.0}/.github/workflows/check_code.yaml +0 -0
  9. {fourcipp-1.18.0 → fourcipp-1.20.0}/.github/workflows/publish_pypi.yaml +0 -0
  10. {fourcipp-1.18.0 → fourcipp-1.20.0}/.github/workflows/run_testsuite.yaml +0 -0
  11. {fourcipp-1.18.0 → fourcipp-1.20.0}/.github/workflows/tag_version.yaml +0 -0
  12. {fourcipp-1.18.0 → fourcipp-1.20.0}/.github/workflows/update_4C_metadata_schema_file.yaml +0 -0
  13. {fourcipp-1.18.0 → fourcipp-1.20.0}/.gitignore +0 -0
  14. {fourcipp-1.18.0 → fourcipp-1.20.0}/.pre-commit-config.yaml +0 -0
  15. {fourcipp-1.18.0 → fourcipp-1.20.0}/LICENSE +0 -0
  16. {fourcipp-1.18.0 → fourcipp-1.20.0}/README.md +0 -0
  17. {fourcipp-1.18.0 → fourcipp-1.20.0}/docs/assets/fourcipp_logo_black.svg +0 -0
  18. {fourcipp-1.18.0 → fourcipp-1.20.0}/docs/assets/fourcipp_logo_white.svg +0 -0
  19. {fourcipp-1.18.0 → fourcipp-1.20.0}/pyproject.toml +0 -0
  20. {fourcipp-1.18.0 → fourcipp-1.20.0}/requirements.in +0 -0
  21. {fourcipp-1.18.0 → fourcipp-1.20.0}/setup.cfg +0 -0
  22. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/FourCIPP.egg-info/SOURCES.txt +0 -0
  23. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/FourCIPP.egg-info/dependency_links.txt +0 -0
  24. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/FourCIPP.egg-info/entry_points.txt +0 -0
  25. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/FourCIPP.egg-info/requires.txt +0 -0
  26. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/FourCIPP.egg-info/top_level.txt +0 -0
  27. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/__init__.py +0 -0
  28. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/config/config.yaml +0 -0
  29. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/fourc_input.py +0 -0
  30. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/__init__.py +0 -0
  31. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/element.py +0 -0
  32. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/inline_dat.py +0 -0
  33. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/node.py +0 -0
  34. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/node_topology.py +0 -0
  35. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/legacy_io/particle.py +0 -0
  36. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/__init__.py +0 -0
  37. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/cli.py +0 -0
  38. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/configuration.py +0 -0
  39. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/converter.py +0 -0
  40. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/dict_utils.py +0 -0
  41. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/metadata.py +0 -0
  42. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/not_set.py +0 -0
  43. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/type_hinting.py +0 -0
  44. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/validation.py +0 -0
  45. {fourcipp-1.18.0 → fourcipp-1.20.0}/src/fourcipp/utils/yaml_io.py +0 -0
  46. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/__init__.py +0 -0
  47. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/conftest.py +0 -0
  48. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/__init__.py +0 -0
  49. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/__init__.py +0 -0
  50. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_element.py +0 -0
  51. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_inline_dat.py +0 -0
  52. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_legacy_io.py +0 -0
  53. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_node.py +0 -0
  54. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_node_topology.py +0 -0
  55. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/test_particle.py +0 -0
  56. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/legacy_io/utils.py +0 -0
  57. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/test_fourc_input.py +0 -0
  58. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/test_readme_quickstart_example.py +0 -0
  59. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/__init__.py +0 -0
  60. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_configuration.py +0 -0
  61. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_converter.py +0 -0
  62. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_dict_utils.py +0 -0
  63. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_metadata.py +0 -0
  64. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_not_set.py +0 -0
  65. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_validation.py +0 -0
  66. {fourcipp-1.18.0 → fourcipp-1.20.0}/tests/fourcipp/utils/test_yaml_io.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: FourCIPP
3
- Version: 1.18.0
3
+ Version: 1.20.0
4
4
  Summary: A streamlined Python Parser for 4C input files
5
5
  Author: FourCIPP Authors
6
6
  License: The MIT License (MIT)
@@ -14,10 +14,7 @@ numpy==2.3.2
14
14
  # via -r requirements.in
15
15
  packaging==25.0
16
16
  # via deprecation
17
- rapidyaml
18
- # TODO update requirements file
19
- # manually removed version because on macos 0.9.0.post2 is latest
20
- # and on linux/windows 0.9.0 is latest
17
+ rapidyaml==0.10.0
21
18
  # via -r requirements.in
22
19
  regex==2025.9.1
23
20
  # via -r requirements.in
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: FourCIPP
3
- Version: 1.18.0
3
+ Version: 1.20.0
4
4
  Summary: A streamlined Python Parser for 4C input files
5
5
  Author: FourCIPP Authors
6
6
  License: The MIT License (MIT)
@@ -1,5 +1,5 @@
1
1
  metadata:
2
- commit_hash: 3d1683e40cb2c39d8ce734dc8dc132a285762cfd
2
+ commit_hash: 486b4fcb077576e8737c5e13a4974eb4b76dee12
3
3
  version: 2025.4.0-dev
4
4
  description_section_name: TITLE
5
5
  legacy_element_specs:
@@ -95191,6 +95191,12 @@ sections:
95191
95191
  type: string
95192
95192
  description: "Refer to a globally defined field by a name."
95193
95193
  required: true
95194
+ - name: from_mesh
95195
+ spec:
95196
+ name: from_mesh
95197
+ type: string
95198
+ description: "Refer to a field defined in the input mesh by a name."
95199
+ required: true
95194
95200
  - type: all_of
95195
95201
  specs:
95196
95202
  - name: MAT
@@ -99463,6 +99469,12 @@ sections:
99463
99469
  type: string
99464
99470
  description: "Refer to a globally defined field by a name."
99465
99471
  required: true
99472
+ - name: from_mesh
99473
+ spec:
99474
+ name: from_mesh
99475
+ type: string
99476
+ description: "Refer to a field defined in the input mesh by a name."
99477
+ required: true
99466
99478
  - type: all_of
99467
99479
  specs:
99468
99480
  - name: MAT
@@ -100381,6 +100393,12 @@ sections:
100381
100393
  type: string
100382
100394
  description: "Refer to a globally defined field by a name."
100383
100395
  required: true
100396
+ - name: from_mesh
100397
+ spec:
100398
+ name: from_mesh
100399
+ type: string
100400
+ description: "Refer to a field defined in the input mesh by a name."
100401
+ required: true
100384
100402
  - name: DENS
100385
100403
  type: double
100386
100404
  description: "density"
@@ -102388,6 +102406,12 @@ sections:
102388
102406
  type: string
102389
102407
  description: "Refer to a globally defined field by a name."
102390
102408
  required: true
102409
+ - name: from_mesh
102410
+ spec:
102411
+ name: from_mesh
102412
+ type: string
102413
+ description: "Refer to a field defined in the input mesh by a name."
102414
+ required: true
102391
102415
  - type: all_of
102392
102416
  specs:
102393
102417
  - name: MAT
@@ -102429,6 +102453,12 @@ sections:
102429
102453
  type: string
102430
102454
  description: "Refer to a globally defined field by a name."
102431
102455
  required: true
102456
+ - name: from_mesh
102457
+ spec:
102458
+ name: from_mesh
102459
+ type: string
102460
+ description: "Refer to a field defined in the input mesh by a name."
102461
+ required: true
102432
102462
  - name: SORET
102433
102463
  type: double
102434
102464
  description: "Soret coefficient"
@@ -211537,16 +211567,52 @@ sections:
211537
211567
  type: string
211538
211568
  description: "Name of the discretization to which this field belongs."
211539
211569
  required: true
211540
- - name: file
211541
- type: path
211542
- description: "(Relative) path to the file containing the field data."
211570
+ - name: source
211571
+ type: selection
211572
+ description: "Source of the input field data."
211543
211573
  required: true
211544
- - name: key
211545
- noneable: true
211546
- type: string
211547
- description: "The key under which the field data is stored in the file. If not specified, the key is assumed to be equal to the name."
211548
- required: false
211549
- default: null
211574
+ choices:
211575
+ - name: separate_file
211576
+ spec:
211577
+ name: separate_file
211578
+ type: group
211579
+ description: Read the field data from a separate json file.
211580
+ required: true
211581
+ specs:
211582
+ - type: all_of
211583
+ specs:
211584
+ - name: file
211585
+ type: path
211586
+ description: "(Relative) path to the file containing the field data."
211587
+ required: true
211588
+ - name: key
211589
+ noneable: true
211590
+ type: string
211591
+ description: "The key under which the field data is stored in the file. If not specified, the key is assumed to be equal to the name."
211592
+ required: false
211593
+ default: null
211594
+ - name: from_mesh
211595
+ spec:
211596
+ name: from_mesh
211597
+ type: group
211598
+ description: Read the field data from the mesh file.
211599
+ required: true
211600
+ specs:
211601
+ - type: all_of
211602
+ specs:
211603
+ - name: basis
211604
+ type: enum
211605
+ description: "The basis on which the field data is defined."
211606
+ required: true
211607
+ choices:
211608
+ - name: cells
211609
+ description: "Field data is defined on the cells"
211610
+ - name: key
211611
+ noneable: true
211612
+ type: string
211613
+ description: "The key under which the field data is stored in the mesh. If not specified, the key is assumed to be equal to the name."
211614
+ required: false
211615
+ default: null
211550
211616
  - name: input_version
211551
211617
  noneable: true
211552
211618
  type: string
@@ -212459,6 +212525,12 @@ sections:
212459
212525
  type: string
212460
212526
  description: "Refer to a globally defined field by a name."
212461
212527
  required: true
212528
+ - name: from_mesh
212529
+ spec:
212530
+ name: from_mesh
212531
+ type: string
212532
+ description: "Refer to a field defined in the input mesh by a name."
212533
+ required: true
212462
212534
  - name: generation
212463
212535
  type: selection
212464
212536
  description: "Generation of the airway elements."
@@ -212482,6 +212554,12 @@ sections:
212482
212554
  type: string
212483
212555
  description: "Refer to a globally defined field by a name."
212484
212556
  required: true
212557
+ - name: from_mesh
212558
+ spec:
212559
+ name: from_mesh
212560
+ type: string
212561
+ description: "Refer to a field defined in the input mesh by a name."
212562
+ required: true
212485
212563
  - name: airways
212486
212564
  type: group
212487
212565
  description: Definition of the airway model.
@@ -212512,6 +212590,12 @@ sections:
212512
212590
  type: string
212513
212591
  description: "Refer to a globally defined field by a name."
212514
212592
  required: true
212593
+ - name: from_mesh
212594
+ spec:
212595
+ name: from_mesh
212596
+ type: string
212597
+ description: "Refer to a field defined in the input mesh by a name."
212598
+ required: true
212515
212599
  - name: flow_model
212516
212600
  type: group
212517
212601
  description: Flow model of the airway.
@@ -212545,6 +212629,12 @@ sections:
212545
212629
  type: string
212546
212630
  description: "Refer to a globally defined field by a name."
212547
212631
  required: true
212632
+ - name: from_mesh
212633
+ spec:
212634
+ name: from_mesh
212635
+ type: string
212636
+ description: "Refer to a field defined in the input mesh by a name."
212637
+ required: true
212548
212638
  - name: resistance_model
212549
212639
  type: group
212550
212640
  description: Definition of the airway resistance model
@@ -212582,6 +212672,12 @@ sections:
212582
212672
  type: string
212583
212673
  description: "Refer to a globally defined field by a name."
212584
212674
  required: true
212675
+ - name: from_mesh
212676
+ spec:
212677
+ name: from_mesh
212678
+ type: string
212679
+ description: "Refer to a field defined in the input mesh by a name."
212680
+ required: true
212585
212681
  - name: include_inertia
212586
212682
  type: selection
212587
212683
  description: "Include inertial effects in the airway flow model."
@@ -212605,6 +212701,12 @@ sections:
212605
212701
  type: string
212606
212702
  description: "Refer to a globally defined field by a name."
212607
212703
  required: true
212704
+ - name: from_mesh
212705
+ spec:
212706
+ name: from_mesh
212707
+ type: string
212708
+ description: "Refer to a field defined in the input mesh by a name."
212709
+ required: true
212608
212710
  - name: wall_model_type
212609
212711
  type: selection
212610
212712
  description: "Type of wall model of the airway."
@@ -212631,6 +212733,12 @@ sections:
212631
212733
  type: string
212632
212734
  description: "Refer to a globally defined field by a name."
212633
212735
  required: true
212736
+ - name: from_mesh
212737
+ spec:
212738
+ name: from_mesh
212739
+ type: string
212740
+ description: "Refer to a field defined in the input mesh by a name."
212741
+ required: true
212634
212742
  - name: wall_model
212635
212743
  type: group
212636
212744
  description: Wall model of the airway.
@@ -212675,6 +212783,12 @@ sections:
212675
212783
  type: string
212676
212784
  description: "Refer to a globally defined field by a name."
212677
212785
  required: true
212786
+ - name: from_mesh
212787
+ spec:
212788
+ name: from_mesh
212789
+ type: string
212790
+ description: "Refer to a field defined in the input mesh by a name."
212791
+ required: true
212678
212792
  - name: wall_elasticity
212679
212793
  type: selection
212680
212794
  description: "Elasticity of the airway wall."
@@ -212698,6 +212812,12 @@ sections:
212698
212812
  type: string
212699
212813
  description: "Refer to a globally defined field by a name."
212700
212814
  required: true
212815
+ - name: from_mesh
212816
+ spec:
212817
+ name: from_mesh
212818
+ type: string
212819
+ description: "Refer to a field defined in the input mesh by a name."
212820
+ required: true
212701
212821
  - name: diameter_over_wall_thickness
212702
212822
  type: selection
212703
212823
  description: "Ratio of diameter over wall thickness."
@@ -212721,6 +212841,12 @@ sections:
212721
212841
  type: string
212722
212842
  description: "Refer to a globally defined field by a name."
212723
212843
  required: true
212844
+ - name: from_mesh
212845
+ spec:
212846
+ name: from_mesh
212847
+ type: string
212848
+ description: "Refer to a field defined in the input mesh by a name."
212849
+ required: true
212724
212850
  - name: viscosity
212725
212851
  type: group
212726
212852
  description: Viscous parameters of the airway wall.
@@ -212751,6 +212877,12 @@ sections:
212751
212877
  type: string
212752
212878
  description: "Refer to a globally defined field by a name."
212753
212879
  required: true
212880
+ - name: from_mesh
212881
+ spec:
212882
+ name: from_mesh
212883
+ type: string
212884
+ description: "Refer to a field defined in the input mesh by a name."
212885
+ required: true
212754
212886
  - name: viscous_phase_shift
212755
212887
  type: selection
212756
212888
  description: "Viscous phase shift."
@@ -212774,6 +212906,12 @@ sections:
212774
212906
  type: string
212775
212907
  description: "Refer to a globally defined field by a name."
212776
212908
  required: true
212909
+ - name: from_mesh
212910
+ spec:
212911
+ name: from_mesh
212912
+ type: string
212913
+ description: "Refer to a field defined in the input mesh by a name."
212914
+ required: true
212777
212915
  - name: terminal_units
212778
212916
  type: group
212779
212917
  description: Terminal units.
@@ -212814,6 +212952,12 @@ sections:
212814
212952
  type: string
212815
212953
  description: "Refer to a globally defined field by a name."
212816
212954
  required: true
212955
+ - name: from_mesh
212956
+ spec:
212957
+ name: from_mesh
212958
+ type: string
212959
+ description: "Refer to a field defined in the input mesh by a name."
212960
+ required: true
212817
212961
  - name: kelvin_voigt
212818
212962
  type: group
212819
212963
  description: Kelvin-Voigt model of the terminal unit.
@@ -212844,6 +212988,12 @@ sections:
212844
212988
  type: string
212845
212989
  description: "Refer to a globally defined field by a name."
212846
212990
  required: true
212991
+ - name: from_mesh
212992
+ spec:
212993
+ name: from_mesh
212994
+ type: string
212995
+ description: "Refer to a field defined in the input mesh by a name."
212996
+ required: true
212847
212997
  - name: 4_element_maxwell
212848
212998
  type: group
212849
212999
  description: 4-element Maxwell model of the terminal unit.
@@ -212874,6 +213024,12 @@ sections:
212874
213024
  type: string
212875
213025
  description: "Refer to a globally defined field by a name."
212876
213026
  required: true
213027
+ - name: from_mesh
213028
+ spec:
213029
+ name: from_mesh
213030
+ type: string
213031
+ description: "Refer to a field defined in the input mesh by a name."
213032
+ required: true
212877
213033
  - name: viscosity_maxwell_eta_m
212878
213034
  type: selection
212879
213035
  description: "Dashpot viscosity of the Maxwell body of the terminal unit."
@@ -212897,6 +213053,12 @@ sections:
212897
213053
  type: string
212898
213054
  description: "Refer to a globally defined field by a name."
212899
213055
  required: true
213056
+ - name: from_mesh
213057
+ spec:
213058
+ name: from_mesh
213059
+ type: string
213060
+ description: "Refer to a field defined in the input mesh by a name."
213061
+ required: true
212900
213062
  - name: elasticity_maxwell_e_m
212901
213063
  type: selection
212902
213064
  description: "Spring stiffness of the Maxwell body of the terminal unit."
@@ -212920,6 +213082,12 @@ sections:
212920
213082
  type: string
212921
213083
  description: "Refer to a globally defined field by a name."
212922
213084
  required: true
213085
+ - name: from_mesh
213086
+ spec:
213087
+ name: from_mesh
213088
+ type: string
213089
+ description: "Refer to a field defined in the input mesh by a name."
213090
+ required: true
212923
213091
  - name: elasticity_model
212924
213092
  type: group
212925
213093
  description: Elasticity model for the customizable spring of the rheological model.
@@ -212953,6 +213121,12 @@ sections:
212953
213121
  type: string
212954
213122
  description: "Refer to a globally defined field by a name."
212955
213123
  required: true
213124
+ - name: from_mesh
213125
+ spec:
213126
+ name: from_mesh
213127
+ type: string
213128
+ description: "Refer to a field defined in the input mesh by a name."
213129
+ required: true
212956
213130
  - name: linear
212957
213131
  type: group
212958
213132
  description: Linear elastic model in the rheological model of the terminal unit.
@@ -212983,6 +213157,12 @@ sections:
212983
213157
  type: string
212984
213158
  description: "Refer to a globally defined field by a name."
212985
213159
  required: true
213160
+ - name: from_mesh
213161
+ spec:
213162
+ name: from_mesh
213163
+ type: string
213164
+ description: "Refer to a field defined in the input mesh by a name."
213165
+ required: true
212986
213166
  - name: ogden
212987
213167
  type: group
212988
213168
  description: Ogden type spring in the rheological model of the terminal unit.
@@ -213013,6 +213193,12 @@ sections:
213013
213193
  type: string
213014
213194
  description: "Refer to a globally defined field by a name."
213015
213195
  required: true
213196
+ - name: from_mesh
213197
+ spec:
213198
+ name: from_mesh
213199
+ type: string
213200
+ description: "Refer to a field defined in the input mesh by a name."
213201
+ required: true
213016
213202
  - name: ogden_parameter_beta
213017
213203
  type: selection
213018
213204
  description: "Parameter Beta in volumetric Ogden law."
@@ -213036,6 +213222,12 @@ sections:
213036
213222
  type: string
213037
213223
  description: "Refer to a globally defined field by a name."
213038
213224
  required: true
213225
+ - name: from_mesh
213226
+ spec:
213227
+ name: from_mesh
213228
+ type: string
213229
+ description: "Refer to a field defined in the input mesh by a name."
213230
+ required: true
213039
213231
  - name: air_properties
213040
213232
  type: group
213041
213233
  description: Air properties for the reduced dimensional lung simulation