FlowCyPy 0.7.0__tar.gz

flowcypy-0.7.0/.flake8

@@ -0,0 +1,12 @@
+[flake8]
+max-line-length = 300
+exclude =
+    .git
+    docs/build
+    docs/source/gallery
+    development
+
+count = true
+per-file-ignores =
+    __init__.py: F403, F401
+    FlowCyPy/units.py: F401

flowcypy-0.7.0/.github/dependabot.yml

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+# Specify reviewers for pull requests
+
+version: 2
+updates:
+  - package-ecosystem: "pip"
+    directory: "/"
+    target-branch: "master"
+    schedule:
+      interval: "weekly"
+      day: "sunday"
+      time: "09:00"

flowcypy-0.7.0/.github/workflows/deploy_PyPi.yml

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+name: Deploy to PyPi
+
+on:
+  push:
+    branches: [ "master" ]
+    tags:
+      - '*'
+  pull_request:
+    branches: [ "master" ]
+
+permissions:
+    contents: write
+
+jobs:
+  pure_package:
+    uses: MartinPdeS/MPSActions/.github/workflows/publish_pure_package_to_PyPi.yml@master
+    with:
+      python-version: "3.11"
+    secrets:
+      PYPI_API_TOKEN: ${{ secrets.PYPI_API_TOKEN }}

flowcypy-0.7.0/.github/workflows/deploy_anaconda.yml

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+name: Deploy Conda Packages
+
+on:
+  push:
+    branches: [ "master" ]
+    tags:
+      - '*'
+  pull_request:
+    branches: [ "master" ]
+
+permissions:
+    contents: write
+
+jobs:
+  ManyLinux_x86_64:
+    uses: MartinPdeS/MPSActions/.github/workflows/publish_compiled_package_to_anaconda.yml@master
+    with:
+      python-versions: '["3.11", "3.12"]'
+    secrets:
+      ANACONDA_API_TOKEN: ${{ secrets.ANACONDA_API_TOKEN }}
+

flowcypy-0.7.0/.github/workflows/deploy_coverage.yml

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+# Simple workflow for deploying static content to GitHub Pages
+name: Deploy coverage
+
+on:
+  push:
+    branches: [ "master" ]
+    tags:
+      - '*'
+  pull_request:
+    branches: [ "master" ]
+
+
+# Sets permissions of the  GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: write
+  pages: write
+  id-token: write
+
+jobs:
+  ManyLinux_x86_64:
+    uses: MartinPdeS/MPSActions/.github/workflows/publish_coverage.yml@master
+    with:
+      python-version: "3.11"
+    secrets:
+      _GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

flowcypy-0.7.0/.github/workflows/deploy_documentation.yml

@@ -0,0 +1,24 @@
+# Simple workflow for deploying static content to GitHub Pages
+name: Deploy documentation to github page
+
+on:
+  push:
+    branches: [ "master" ]
+    tags:
+      - '*'
+  pull_request:
+    branches: [ "master" ]
+
+
+# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: write
+  pages: write
+  id-token: write
+
+jobs:
+  ManyLinux_x86_64:
+    uses: MartinPdeS/MPSActions/.github/workflows/publish_documentation.yml@master
+    with:
+      python-version: "3.11"
+      package-name: "FlowCyPy"

flowcypy-0.7.0/.gitignore

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+# General patterns
+*.DS_store
+*.ipynb_checkpoints*
+*__pycache__*
+*.so
+*.a
+.coverage*
+*.pytest_cache
+htmlcov
+dist
+build
+*.egg*
+*.whl
+CMakeCache.txt
+CMakeFiles
+install_manifest.txt
+cmake_install.cmake
+wheelhouse
+
+# Docs-specific patterns
+docs/source/gallery/*
+!docs/source/gallery/index.rst
+PyOptik/data/**/test*
+PyOptik/data/**/example*
+
+# Override for documentation_build
+!documentation_build
+!documentation_build/**

flowcypy-0.7.0/FlowCyPy/__init__.py

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+try:
+    from ._version import version as __version__  # noqa: F401
+
+except ImportError:
+    __version__ = "0.0.0"
+
+from .cytometer import FlowCytometer
+from .scatterer_collection import ScattererCollection, CouplingModel
+from .population import Population
+from .detector import Detector
+from .flow_cell import FlowCell
+from .source import GaussianBeam
+from .noises import NoiseSetting

flowcypy-0.7.0/FlowCyPy/_version.py

@@ -0,0 +1,16 @@
+# file generated by setuptools_scm
+# don't change, don't track in version control
+TYPE_CHECKING = False
+if TYPE_CHECKING:
+    from typing import Tuple, Union
+    VERSION_TUPLE = Tuple[Union[int, str], ...]
+else:
+    VERSION_TUPLE = object
+
+version: str
+__version__: str
+__version_tuple__: VERSION_TUPLE
+version_tuple: VERSION_TUPLE
+
+__version__ = version = '0.7.0'
+__version_tuple__ = version_tuple = (0, 7, 0)