ECOv003-L2T-STARS 1.0.0__tar.gz → 1.1.0__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (121) hide show
  1. ecov003_l2t_stars-1.1.0/.github/workflows/ci.yml +34 -0
  2. ecov003_l2t_stars-1.1.0/Dockerfile +35 -0
  3. ecov003_l2t_stars-1.1.0/ECOSTRESS Granule Download Bias.ipynb +1146 -0
  4. ecov003_l2t_stars-1.1.0/ECOSTRESS Granule Download.ipynb +1269 -0
  5. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/ECOv003_DL.py +527 -0
  6. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/ECOv003_DL.xml +47 -0
  7. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/ECOv003_L2T_STARS.py +162 -0
  8. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/L2T_STARS.xml → ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/ECOv003_L2T_STARS.xml +1 -1
  9. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/L2TSTARSConfig.py +188 -0
  10. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/L2T_STARS.py +489 -0
  11. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/LPDAAC/LPDAACDataPool.py +1 -1
  12. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/Manifest.toml +2332 -0
  13. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/Project.toml +14 -0
  14. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VIIRS_CMR_LOGIN.py +0 -1
  15. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VNP09GA.py +2 -1
  16. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VNP43MA3.py +1 -1
  17. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT/VNP43NRT.py +5 -5
  18. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT/process_VNP43NRT.jl +21 -9
  19. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/VNP43NRT_jl/Manifest.toml +995 -0
  20. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT_jl/instantiate.py +1 -1
  21. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/__init__.py +3 -0
  22. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/calibrate_fine_to_coarse.py +60 -0
  23. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/constants.py +38 -0
  24. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_L2T_STARS_runconfig.py +249 -0
  25. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_NDVI_coarse_directory.py +21 -0
  26. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_NDVI_coarse_image.py +30 -0
  27. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_NDVI_fine_directory.py +14 -0
  28. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_NDVI_fine_image.py +28 -0
  29. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_STARS_inputs.py +231 -0
  30. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_albedo_coarse_directory.py +18 -0
  31. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_albedo_coarse_image.py +30 -0
  32. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_albedo_fine_directory.py +17 -0
  33. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_albedo_fine_image.py +30 -0
  34. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_filename.py +37 -0
  35. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_input_staging_directory.py +23 -0
  36. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_model_state_tile_date_directory.py +28 -0
  37. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/generate_output_directory.py +28 -0
  38. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/install_STARS_jl.py +43 -0
  39. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/instantiate_STARS_jl.py +38 -0
  40. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/load_prior.py +248 -0
  41. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/prior.py +56 -0
  42. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/process_ECOSTRESS_data_fusion_distributed_bias.jl +420 -0
  43. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/process_STARS_product.py +507 -0
  44. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/process_julia_data_fusion.py +110 -0
  45. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/retrieve_STARS_sources.py +101 -0
  46. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/runconfig.py +1 -1
  47. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/version.py +8 -0
  48. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/version.txt +1 -0
  49. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS.egg-info}/PKG-INFO +30 -23
  50. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS.egg-info/SOURCES.txt +90 -0
  51. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS.egg-info/entry_points.txt +3 -0
  52. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS.egg-info/requires.txt +13 -20
  53. ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS.egg-info/top_level.txt +1 -0
  54. {ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS.egg-info → ecov003_l2t_stars-1.1.0}/PKG-INFO +30 -23
  55. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/README.md +13 -0
  56. ecov003_l2t_stars-1.1.0/STARS_memory_profile.jpeg +0 -0
  57. ecov003_l2t_stars-1.1.0/demo.py +61 -0
  58. ecov003_l2t_stars-1.1.0/example_L2T_STARS_with_download.py +60 -0
  59. ecov003_l2t_stars-1.1.0/makefile +74 -0
  60. ecov003_l2t_stars-1.1.0/mprofile_20241202193217.dat +9558 -0
  61. ecov003_l2t_stars-1.1.0/mprofile_20241203112611.dat +9718 -0
  62. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/pyproject.toml +20 -23
  63. ecov003_l2t_stars-1.1.0/tests/test_import_ECOv003_L3T_L4T_JET.py +2 -0
  64. ecov003_l2t_stars-1.1.0/tests/test_import_dependencies.py +28 -0
  65. ecov003_l2t_stars-1.0.0/ECOSTRESS Granule Download.ipynb +0 -206
  66. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/ECOSTRESS_tiled_granule.py +0 -567
  67. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/L2T_STARS.py +0 -1777
  68. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/PGEVersion.py +0 -4
  69. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/PGEVersion.txt +0 -1
  70. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/.gitignore +0 -28
  71. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/LICENSE +0 -21
  72. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/Project.toml +0 -51
  73. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/README.md +0 -2
  74. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/instantiate.py +0 -13
  75. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/BBoxes.jl +0 -50
  76. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/FilterSmoother.jl +0 -280
  77. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/HLS.jl +0 -721
  78. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/MODLAND.jl +0 -93
  79. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/Points.jl +0 -45
  80. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/STARS.jl +0 -1189
  81. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/VIIRS.jl +0 -117
  82. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/VNP43.jl +0 -499
  83. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/sentinel2.geojson +0 -56990
  84. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl/src/sentinel_tiles.jl +0 -136
  85. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/VNP43NRT_jl/__init__.py +0 -0
  86. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/VNP43NRT_jl/instantiate.jl +0 -25
  87. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/VNP43NRT_jl/src/__init__.py +0 -0
  88. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/__init__.py +0 -9
  89. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/exit_codes.py +0 -151
  90. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/process_ECOSTRESS_data_fusion.jl +0 -228
  91. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/version.txt +0 -1
  92. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS.egg-info/SOURCES.txt +0 -69
  93. ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS.egg-info/top_level.txt +0 -1
  94. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/.github/workflows/python-publish.yml +0 -0
  95. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/.gitignore +0 -0
  96. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/BRDF/BRDF.py +0 -0
  97. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/BRDF/SZA.py +0 -0
  98. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/BRDF/__init__.py +0 -0
  99. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/BRDF/statistical_radiative_transport.txt +0 -0
  100. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/BRDF/version.txt +0 -0
  101. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/LPDAAC/__init__.py +0 -0
  102. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/LPDAAC/version.txt +0 -0
  103. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VIIRSDataPool.py +0 -0
  104. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VIIRSDownloader.py +0 -0
  105. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/VNP43IA4.py +0 -0
  106. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/__init__.py +0 -0
  107. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VIIRS/version.txt +0 -0
  108. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT/__init__.py +0 -0
  109. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT/version.txt +0 -0
  110. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT_jl/Project.toml +0 -0
  111. {ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl → ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/VNP43NRT_jl}/__init__.py +0 -0
  112. {ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl → ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/VNP43NRT_jl}/instantiate.jl +0 -0
  113. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/VNP43NRT_jl/src/VNP43NRT.jl +0 -0
  114. {ecov003_l2t_stars-1.0.0/ECOv003_L2T_STARS/STARS_jl → ecov003_l2t_stars-1.1.0/ECOv003_L2T_STARS/VNP43NRT_jl}/src/__init__.py +0 -0
  115. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/daterange/__init__.py +0 -0
  116. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/daterange/daterange.py +0 -0
  117. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/timer/__init__.py +0 -0
  118. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS/timer/timer.py +0 -0
  119. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/ECOv003_L2T_STARS.egg-info/dependency_links.txt +0 -0
  120. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/LICENSE +0 -0
  121. {ecov003_l2t_stars-1.0.0 → ecov003_l2t_stars-1.1.0}/setup.cfg +0 -0
@@ -0,0 +1,34 @@
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+ name: CI
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+
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+ on:
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+ push:
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+ branches:
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+ - main
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+ pull_request:
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+ branches:
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+ - main
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+
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+ jobs:
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+ test:
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+ runs-on: ubuntu-latest
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+ strategy:
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+ matrix:
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+ python-version: ["3.10"]
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+
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+ steps:
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+ - name: Checkout repository
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+ uses: actions/checkout@v3 # This is already the latest version
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+
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+ - name: Set up Python
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+ uses: actions/setup-python@v4 # This is also the latest version
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+ with:
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+ python-version: ${{ matrix.python-version }}
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+
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+ - name: Install dependencies
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+ run: |
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+ python -m pip install --upgrade pip
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+ pip install .[dev] # Use dev to install pytest
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+
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+ - name: Run tests
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+ run: |
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+ pytest
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+ # Using Debian-based python:3.13.2-bookworm base image
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+ FROM python:3.10.16-bookworm as base
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+ ENV HOME /root
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+
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+ FROM base as environment
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+
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+ # Update Debian and install required dependencies
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+ RUN apt-get update && apt-get install -y --no-install-recommends tzdata wget fish ca-certificates
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+
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+ # Install Julia
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+ ENV JULIA_VERSION=1.10.4
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+ RUN wget -q https://julialang-s3.julialang.org/bin/linux/x64/1.10/julia-$JULIA_VERSION-linux-x86_64.tar.gz \
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+ && tar -xzf julia-$JULIA_VERSION-linux-x86_64.tar.gz -C /opt \
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+ && ln -s /opt/julia-$JULIA_VERSION/bin/julia /usr/local/bin/julia \
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+ && rm julia-$JULIA_VERSION-linux-x86_64.tar.gz
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+
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+ RUN pip install --upgrade pip
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+ RUN pip install tomli
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+
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+ FROM environment as installation
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+
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+ # Creating directory inside container to store PGE code
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+ RUN mkdir /app
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+
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+ # Copying current snapshot of PGE code repository into container
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+ COPY . /app/
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+
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+ # Running pip install using pyproject.toml
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+ COPY pyproject.toml /app/pyproject.toml
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+ WORKDIR /app
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+
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+ # FROM dependencies as build
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+ FROM installation as build
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+ RUN make install
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+ RUN rm -rvf build; rm -rvf dist; rm -rvf *.egg-