DiaModality 0.1.3__tar.gz → 0.1.4__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {diamodality-0.1.3/src/DiaModality.egg-info → diamodality-0.1.4}/PKG-INFO +47 -42
- diamodality-0.1.4/README.md +113 -0
- diamodality-0.1.4/src/DiaModality/_version.py +1 -0
- {diamodality-0.1.3 → diamodality-0.1.4/src/DiaModality.egg-info}/PKG-INFO +47 -42
- diamodality-0.1.3/README.md +0 -108
- diamodality-0.1.3/src/DiaModality/_version.py +0 -1
- {diamodality-0.1.3 → diamodality-0.1.4}/LICENSE +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/MANIFEST.in +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/pyproject.toml +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/setup.cfg +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality/CsvParser.py +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality/ModalityPlot.py +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality/__init__.py +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality/__main__.py +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality.egg-info/SOURCES.txt +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality.egg-info/dependency_links.txt +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality.egg-info/requires.txt +0 -0
- {diamodality-0.1.3 → diamodality-0.1.4}/src/DiaModality.egg-info/top_level.txt +0 -0
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Metadata-Version: 2.1
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Name: DiaModality
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Version: 0.1.
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Version: 0.1.4
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Summary: Tool to plot modality vector diagrams
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Author-email: konung-yaropolk <yaropolk1995@gmail.com>
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License: MIT License
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import DiaModality.ModalityPlot as plt
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import os
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# input
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files = 'modality_data.csv'
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# input files:
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files = ['modality_data.csv']
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# Get full path
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# Get full path
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script_dir = os.path.dirname(os.path.realpath(__file__))
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#
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data,
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for file in files:
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# Get full path of input files
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file_path = os.path.join(script_dir, file)
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# Parse data from csv file
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new_csv = csv.LoadCsv(file_path)
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data, binarization = new_csv.ParseCsv(3, 3)
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# Make figure:
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plot = plt.ModalityPlot(
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data,
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binarization,
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modalities=[
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'Set 1', 'Set 2', 'Set 3'],
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angles=[210, 90, 330],
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labels=False,
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scalecircle=0.5, # Scale circle radius
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scalecircle_linestyle=':',
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scalecircle_linewidth=0.75,
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marker='', # vector endpoints marker
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linestyle='-',
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linewidth=0.5,
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alpha=0.5,
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same_scale=False, # Draw all the subplots in the same scale
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full_center=True, # Draw all vectors in the central subplot, else draw trimodal vectors only
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whole_sum=True, # Calculate all three modality vectors despite binarization
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figsize=(10, 10),
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title='Modality Diagram Example',
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colors=(
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'tab:green', # Set 1 color
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'navy', # Set 2 color
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'tab:red', # Set 3 color
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'#1E88E5', # Sets 1 & 2 intersection color
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'#FF9933', # Sets 1 & 3 intersection color
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'#9900FF', # Sets 2 & 3 intersection color
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'black', # All sets intersection color
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),
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)
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plot.save(file_path, type='png', transparent=False)
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plot.show()
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```
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Source page:
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# DiaModality - The Modality Diagram
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Simple tool to plot vector modality diagram
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### To install package run the command:
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```bash
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pip install diamodality
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```
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### How to use:
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See the /demo directory on Git repo or
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create and run the following two files:
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---
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``generate_sample_data.py``:
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```python
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import csv
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import random
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import os
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num_rows = 1500
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output_file = 'modality_data.csv'
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# locate working directory
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script_dir = os.path.dirname(os.path.realpath(__file__))
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file_path = os.path.join(script_dir, output_file)
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# Open a new CSV file to write the data
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with open(file_path, mode='w', newline='') as file:
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writer = csv.writer(file)
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# Generate the data
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signal_treshold = 1.5
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for _ in range(num_rows):
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# generate data columns:
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col1 = random.uniform(0, 2.7)
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col2 = random.uniform(0, 3.3)
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col3 = random.uniform(0, 7.3)
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# generate binarization columns:
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col4 = 1 if col1 > signal_treshold else ''
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col5 = 1 if col2 > signal_treshold else ''
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col6 = 1 if col3 > signal_treshold else ''
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writer.writerow([col1, col2, col3, col4, col5, col6])
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```
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---
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``plot_sample_data.py``:
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```python
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import DiaModality.CsvParser as csv
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import DiaModality.ModalityPlot as plt
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import os
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# input files:
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files = ['modality_data.csv']
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# Get full path
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script_dir = os.path.dirname(os.path.realpath(__file__))
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for file in files:
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# Get full path of input files
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file_path = os.path.join(script_dir, file)
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# Parse data from csv file
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new_csv = csv.LoadCsv(file_path)
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data, binarization = new_csv.ParseCsv(3, 3)
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# Make figure:
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plot = plt.ModalityPlot(
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data,
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binarization,
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modalities=[
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'Set 1', 'Set 2', 'Set 3'],
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angles=[210, 90, 330],
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labels=False,
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scalecircle=0.5, # Scale circle radius
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scalecircle_linestyle=':',
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scalecircle_linewidth=0.75,
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marker='', # vector endpoints marker
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linestyle='-',
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linewidth=0.5,
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alpha=0.5,
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same_scale=False, # Draw all the subplots in the same scale
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full_center=True, # Draw all vectors in the central subplot, else draw trimodal vectors only
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whole_sum=True, # Calculate all three modality vectors despite binarization
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figsize=(10, 10),
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title='Modality Diagram Example',
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colors=(
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'tab:green', # Set 1 color
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'navy', # Set 2 color
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'tab:red', # Set 3 color
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'#1E88E5', # Sets 1 & 2 intersection color
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'#FF9933', # Sets 1 & 3 intersection color
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'#9900FF', # Sets 2 & 3 intersection color
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'black', # All sets intersection color
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),
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)
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plot.save(file_path, type='png', transparent=False)
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plot.show()
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```
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Source page:
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https://github.com/konung-yaropolk/DiaModality
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__version__ = "0.1.4"
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Metadata-Version: 2.1
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Name: DiaModality
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Version: 0.1.4
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Summary: Tool to plot modality vector diagrams
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Author-email: konung-yaropolk <yaropolk1995@gmail.com>
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License: MIT License
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import DiaModality.ModalityPlot as plt
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import os
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# input
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files = 'modality_data.csv'
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# input files:
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files = ['modality_data.csv']
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# Get full path
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# Get full path
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script_dir = os.path.dirname(os.path.realpath(__file__))
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for file in files:
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# Get full path of input files
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file_path = os.path.join(script_dir, file)
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# Parse data from csv file
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new_csv = csv.LoadCsv(file_path)
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data, binarization = new_csv.ParseCsv(3, 3)
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# Make figure:
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plot = plt.ModalityPlot(
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data,
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binarization,
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modalities=[
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'Set 1', 'Set 2', 'Set 3'],
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angles=[210, 90, 330],
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labels=False,
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scalecircle=0.5, # Scale circle radius
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scalecircle_linestyle=':',
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scalecircle_linewidth=0.75,
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marker='', # vector endpoints marker
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linestyle='-',
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linewidth=0.5,
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alpha=0.5,
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same_scale=False, # Draw all the subplots in the same scale
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full_center=True, # Draw all vectors in the central subplot, else draw trimodal vectors only
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whole_sum=True, # Calculate all three modality vectors despite binarization
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figsize=(10, 10),
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title='Modality Diagram Example',
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colors=(
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'tab:green', # Set 1 color
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'navy', # Set 2 color
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'tab:red', # Set 3 color
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'#1E88E5', # Sets 1 & 2 intersection color
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'#FF9933', # Sets 1 & 3 intersection color
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'#9900FF', # Sets 2 & 3 intersection color
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'black', # All sets intersection color
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),
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)
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plot.save(file_path, type='png', transparent=False)
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plot.show()
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```
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Source page:
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diamodality-0.1.3/README.md
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# DiaModality - The Modality Diagram
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Simple tool to plot vector modality diagram
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### To install package run the command:
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```bash
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pip install diamodality
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```
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### How to use:
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See the /demo directory on Git repo or
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create and run the following two files:
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---
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``generate_sample_data.py``:
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```python
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import csv
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import random
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|
20
|
-
import os
|
|
21
|
-
|
|
22
|
-
num_rows = 1500
|
|
23
|
-
output_file = 'modality_data.csv'
|
|
24
|
-
|
|
25
|
-
# locate working directory
|
|
26
|
-
script_dir = os.path.dirname(os.path.realpath(__file__))
|
|
27
|
-
file_path = os.path.join(script_dir, output_file)
|
|
28
|
-
|
|
29
|
-
# Open a new CSV file to write the data
|
|
30
|
-
with open(file_path, mode='w', newline='') as file:
|
|
31
|
-
writer = csv.writer(file)
|
|
32
|
-
|
|
33
|
-
# Generate the data
|
|
34
|
-
signal_treshold = 1.5
|
|
35
|
-
for _ in range(num_rows):
|
|
36
|
-
|
|
37
|
-
# generate data columns:
|
|
38
|
-
col1 = random.uniform(0, 2.7)
|
|
39
|
-
col2 = random.uniform(0, 3.3)
|
|
40
|
-
col3 = random.uniform(0, 7.3)
|
|
41
|
-
|
|
42
|
-
# generate binarization columns:
|
|
43
|
-
col4 = 1 if col1 > signal_treshold else ''
|
|
44
|
-
col5 = 1 if col2 > signal_treshold else ''
|
|
45
|
-
col6 = 1 if col3 > signal_treshold else ''
|
|
46
|
-
|
|
47
|
-
writer.writerow([col1, col2, col3, col4, col5, col6])
|
|
48
|
-
|
|
49
|
-
```
|
|
50
|
-
|
|
51
|
-
|
|
52
|
-
---
|
|
53
|
-
``plot_sample_data.py``:
|
|
54
|
-
```python
|
|
55
|
-
import DiaModality.CsvParser as csv
|
|
56
|
-
import DiaModality.ModalityPlot as plt
|
|
57
|
-
import os
|
|
58
|
-
|
|
59
|
-
# input file:
|
|
60
|
-
files = 'modality_data.csv'
|
|
61
|
-
|
|
62
|
-
# Get full path of input files
|
|
63
|
-
script_dir = os.path.dirname(os.path.realpath(__file__))
|
|
64
|
-
file_path = os.path.join(script_dir, file)
|
|
65
|
-
|
|
66
|
-
# Parse data from csv file
|
|
67
|
-
new_csv = csv.LoadCsv(file_path)
|
|
68
|
-
data, binarization = new_csv.ParseCsv(3, 3)
|
|
69
|
-
|
|
70
|
-
# Make figure:
|
|
71
|
-
plot = plt.ModalityPlot(
|
|
72
|
-
data,
|
|
73
|
-
binarization,
|
|
74
|
-
modalities=['Set 1', 'Set 2', 'Set 3'],
|
|
75
|
-
angles=[210, 90, 330],
|
|
76
|
-
labels=False,
|
|
77
|
-
scalecircle=0.5, # Scale circle radius
|
|
78
|
-
scalecircle_linestyle=':',
|
|
79
|
-
scalecircle_linewidth=0.75,
|
|
80
|
-
marker='', # vector endpoints marker
|
|
81
|
-
linestyle='-',
|
|
82
|
-
linewidth=0.5,
|
|
83
|
-
alpha=0.5,
|
|
84
|
-
same_scale=False, # Draw all the subplots in the same scale
|
|
85
|
-
full_center=True, # Draw all vectors in the central subplot, else draw trimodal vectors only
|
|
86
|
-
whole_sum=True, # Calculate all three modality vectors despite binarization
|
|
87
|
-
figsize=(10, 10),
|
|
88
|
-
title='Modality Diagram Example',
|
|
89
|
-
colors=(
|
|
90
|
-
'tab:green', # Set 1 color
|
|
91
|
-
'navy', # Set 2 color
|
|
92
|
-
'tab:red', # Set 3 color
|
|
93
|
-
'#1E88E5', # Sets 1 & 2 intersection color
|
|
94
|
-
'#FF9933', # Sets 1 & 3 intersection color
|
|
95
|
-
'#9900FF', # Sets 2 & 3 intersection color
|
|
96
|
-
'black', # All sets intersection color
|
|
97
|
-
),
|
|
98
|
-
)
|
|
99
|
-
|
|
100
|
-
plot.save(file_path, type='png', transparent=False)
|
|
101
|
-
plot.show()
|
|
102
|
-
```
|
|
103
|
-
|
|
104
|
-
Source page:
|
|
105
|
-
https://github.com/konung-yaropolk/DiaModality
|
|
106
|
-
|
|
107
|
-
|
|
108
|
-

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|
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