DeepSDFStruct 1.7.2__tar.gz → 1.7.3__tar.gz

deepsdfstruct-1.7.3/.github/workflows/publish.yml

@@ -0,0 +1,56 @@
+name: Publish to PyPI
+
+on:
+  push:
+    tags:
+      - "v*"
+
+jobs:
+  test:
+    uses: ./.github/workflows/test.yml
+    secrets: inherit
+
+  publish:
+    needs: test
+    if: github.ref_type == 'tag'
+
+    runs-on: ubuntu-latest
+    environment:
+      name: pypi
+
+    permissions:
+      contents: read
+      id-token: write
+
+    steps:
+      - name: Checkout repository
+        uses: actions/checkout@v4
+        with:
+          fetch-depth: 0
+
+      - name: Set up Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+
+      - name: Install uv
+        uses: astral-sh/setup-uv@v6
+        with:
+          enable-cache: true
+
+      - name: Verify stable tag format
+        shell: bash
+        run: |
+          if [[ ! "$GITHUB_REF_NAME" =~ ^v[0-9]+\.[0-9]+\.[0-9]+$ ]]; then
+            echo "::error::Tag '$GITHUB_REF_NAME' must be in the format vX.Y.Z"
+            exit 1
+          fi
+
+      - name: Sync dependencies
+        run: uv sync --locked
+
+      - name: Build package
+        run: uv build
+
+      - name: Publish to PyPI
+        run: uv publish

{deepsdfstruct-1.7.2 → deepsdfstruct-1.7.3}/DeepSDFStruct/flexicubes/flexicubes.py

@@ -28,10 +28,14 @@ Licensed under the Apache License, Version 2.0.
 # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 # See the License for the specific language governing permissions and
 # limitations under the License.
+import logging
+
 import torch
 import warnings
 from DeepSDFStruct.flexicubes.tables import *
 
+logger = logging.getLogger(__name__)
+
 __all__ = ["FlexiCubes"]
 
 
@@ -1002,4 +1006,57 @@ class FlexiCubes:
 
         tets = torch.cat([tets_surface, tets_inside])
         vertices = torch.cat([vertices, inside_verts, inside_cubes_center])
+        # The surface (pyramid) and interior sub-procedures above emit tets
+        # with inconsistent winding, so a large fraction come out inverted
+        # (negative signed volume). FEA solvers require a positive signed
+        # volume / Jacobian, so normalize every tet to positive orientation
+        # and drop degenerate (zero-volume) elements.
+        tets = self._orient_tets(vertices, tets)
         return vertices, tets
+
+    @staticmethod
+    def _orient_tets(vertices, tets, threshold_factor=1e-5):
+        """Return ``tets`` with a consistent, strictly positive signed volume.
+
+        For a tetrahedron with vertices ``(v0, v1, v2, v3)`` the signed volume
+        is proportional to ``det([v1 - v0, v2 - v0, v3 - v0])``. Elements with
+        a negative determinant are inverted; swapping the last two vertices
+        flips the orientation so the signed volume becomes positive without
+        changing the element's geometry. The vertex indices are merely
+        reordered, so gradients to ``vertices`` are unaffected.
+
+        Degenerate elements (four coplanar vertices, zero volume) cannot be
+        repaired by reordering and are removed instead. Vertices are left
+        untouched, so indices of the remaining tets stay valid.
+
+        Args:
+            vertices (torch.Tensor): All vertices as coordinates
+            tets (torch.Tensor): Indices of vertices that form tets
+            threshold_factor (float, optional): Maximum element volume
+                up until the elements get removed. Gets multiplied by
+                the Hadamard bound |e1||e2||e3|.
+        """
+        if tets.shape[0] == 0:
+            return tets
+        # Only integer index masks are derived here, so skip autograd
+        # recording even when ``vertices`` requires gradients.
+        with torch.no_grad():
+            v0 = vertices[tets[:, 0]]
+            v1 = vertices[tets[:, 1]]
+            v2 = vertices[tets[:, 2]]
+            v3 = vertices[tets[:, 3]]
+            e1, e2, e3 = v1 - v0, v2 - v0, v3 - v0
+            signed_vol = torch.einsum("ij,ij->i", e1, torch.linalg.cross(e2, e3, dim=1))
+            inverted = signed_vol < 0
+            # Coplanar tets only evaluate to exactly zero up to floating-point
+            # rounding (which depends on the association order of the triple
+            # product), so compare against a tolerance relative to the Hadamard
+            # bound |e1||e2||e3| of the determinant instead of zero itself.
+            scale = e1.norm(dim=1) * e2.norm(dim=1) * e3.norm(dim=1)
+            degenerate = signed_vol.abs() <= threshold_factor * scale
+        tets = tets.clone()
+        tets[inverted] = tets[inverted][:, [0, 1, 3, 2]]
+        if degenerate.any():
+            logger.info(f"removed {int(degenerate.sum())} elements with 0 volume")
+            tets = tets[~degenerate]
+        return tets

{deepsdfstruct-1.7.2 → deepsdfstruct-1.7.3}/DeepSDFStruct.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: DeepSDFStruct
-Version: 1.7.2
+Version: 1.7.3
 Summary: Deep Implicit Lattice Geometry
 Author-email: Michael Kofler <michael.kofler@tuwien.ac.at>
 Requires-Python: >=3.10

{deepsdfstruct-1.7.2 → deepsdfstruct-1.7.3}/DeepSDFStruct.egg-info/SOURCES.txt

@@ -166,6 +166,7 @@ tests/test_sdf_primitives.py
 tests/test_sdf_trimesh_comparison.py
 tests/test_splinepy_unitcells.py
 tests/test_structural_optimization.py
+tests/test_tet_orientation.py
 tests/test_torch_spline.py
 tests/test_train_model.py
 tests/test_training_data_ids.py

{deepsdfstruct-1.7.2 → deepsdfstruct-1.7.3}/DeepSDFStruct.egg-info/scm_file_list.json

@@ -1,178 +1,179 @@
 {
   "files": [
-    "LICENSE",
-    "uv.lock",
-    ".pre-commit-config.yaml",
-    "pyproject.toml",
-    "MANIFEST.in",
-    "NOTICE",
-    ".deepsource.toml",
-    "README.md",
-    "example.ipynb",
     ".gitignore",
+    "README.md",
     "AGENT_INSTRUCTIONS.md",
+    "example.ipynb",
     "SDF_FEATURE_TRACKING.md",
-    "tests/test_mesh_functions.py",
-    "tests/test_torch_spline.py",
-    "tests/test_DOE.py",
-    "tests/test_mesh_export.py",
-    "tests/test_sdf_trimesh_comparison.py",
-    "tests/test_flexisquares.py",
-    "tests/test_train_model.py",
-    "tests/test_pretrained_models.py",
-    "tests/test_sdf_primitives.py",
-    "tests/test_structural_optimization.py",
-    "tests/test_sdf_functions.py",
-    "tests/test_sdf_from_mesh.py",
-    "tests/test_networks.py",
-    "tests/test_training_data_ids.py",
-    "tests/test_elongate_sdf.py",
-    "tests/test_lattice_evaluation.py",
-    "tests/test_generate_dataset.py",
-    "tests/test_reconstruction.py",
-    "tests/test_splinepy_unitcells.py",
-    "tests/tmp_outputs/temp_file.txt",
-    "tests/data/stanford_bunny.stl",
-    "tests/data/example_disconnectd_mesh.inp",
-    "tests/data/sweep_test_case.stl",
-    "tests/data/cone.stl",
-    "tests/data/circular_balls_test_case.stl",
-    "tests/data/example_line_mesh.vtk",
-    "tests/data/chairs/1024.obj",
-    "tests/data/chairs/README.md",
-    "tests/data/chairs/1005.obj",
-    "docs/index.rst",
-    "docs/api_reference.rst",
-    "docs/qr_code_paper.png",
-    "docs/Makefile",
-    "docs/qr_code_github.png",
-    "docs/conf.py",
-    "docs/make.bat",
-    "docs/readme_images/example_output_01.png",
-    "docs/readme_images/example_output_02.png",
-    "docs/readme_images/example_output_03.png",
-    "docs/readme_images/example_output_04.png",
+    ".deepsource.toml",
+    "NOTICE",
+    "pyproject.toml",
+    "MANIFEST.in",
+    ".pre-commit-config.yaml",
+    "uv.lock",
+    "LICENSE",
     "benchmarks/generate_sdf_showcase.py",
     "benchmarks/sdf_from_mesh_benchmark.py",
     "benchmarks/sdf_from_mesh_comparison.md",
-    "benchmarks/sdf_showcase/operations/transformations/shell_sphere.png",
-    "benchmarks/sdf_showcase/operations/transformations/mirror_sphere.png",
-    "benchmarks/sdf_showcase/operations/transformations/circular_array_sphere.png",
-    "benchmarks/sdf_showcase/operations/transformations/twist_torus.png",
-    "benchmarks/sdf_showcase/operations/transformations/dilate_sphere.png",
-    "benchmarks/sdf_showcase/operations/transformations/repeat_sphere.png",
-    "benchmarks/sdf_showcase/operations/transformations/revolve_circle.png",
-    "benchmarks/sdf_showcase/operations/boolean/union_sphere_box.png",
-    "benchmarks/sdf_showcase/operations/boolean/difference_sphere_box.png",
-    "benchmarks/sdf_showcase/primitives/3D/icosahedron.png",
-    "benchmarks/sdf_showcase/primitives/3D/ellipsoid.png",
-    "benchmarks/sdf_showcase/primitives/3D/rounded_box.png",
+    "benchmarks/sdf_showcase/primitives/2D/rectangle.png",
+    "benchmarks/sdf_showcase/primitives/2D/rounded_rectangle.png",
+    "benchmarks/sdf_showcase/primitives/2D/equilateral_triangle.png",
+    "benchmarks/sdf_showcase/primitives/2D/hexagon.png",
+    "benchmarks/sdf_showcase/primitives/2D/circle.png",
+    "benchmarks/sdf_showcase/primitives/2D/polygon_pentagon.png",
+    "benchmarks/sdf_showcase/primitives/3D/capsule.png",
+    "benchmarks/sdf_showcase/primitives/3D/cylinder.png",
+    "benchmarks/sdf_showcase/primitives/3D/wireframe_box.png",
     "benchmarks/sdf_showcase/primitives/3D/sphere.png",
+    "benchmarks/sdf_showcase/primitives/3D/cross_ms.png",
+    "benchmarks/sdf_showcase/primitives/3D/cone.png",
     "benchmarks/sdf_showcase/primitives/3D/corner_spheres.png",
-    "benchmarks/sdf_showcase/primitives/3D/torus.png",
     "benchmarks/sdf_showcase/primitives/3D/dodecahedron.png",
-    "benchmarks/sdf_showcase/primitives/3D/rounded_cone.png",
-    "benchmarks/sdf_showcase/primitives/3D/cone.png",
-    "benchmarks/sdf_showcase/primitives/3D/capsule.png",
+    "benchmarks/sdf_showcase/primitives/3D/rounded_box.png",
     "benchmarks/sdf_showcase/primitives/3D/capped_cylinder.png",
-    "benchmarks/sdf_showcase/primitives/3D/cross_ms.png",
-    "benchmarks/sdf_showcase/primitives/3D/wireframe_box.png",
-    "benchmarks/sdf_showcase/primitives/3D/tetrahedron.png",
-    "benchmarks/sdf_showcase/primitives/3D/cylinder.png",
     "benchmarks/sdf_showcase/primitives/3D/octahedron.png",
-    "benchmarks/sdf_showcase/primitives/3D/pyramid.png",
     "benchmarks/sdf_showcase/primitives/3D/rounded_cylinder.png",
+    "benchmarks/sdf_showcase/primitives/3D/icosahedron.png",
     "benchmarks/sdf_showcase/primitives/3D/box.png",
+    "benchmarks/sdf_showcase/primitives/3D/rounded_cone.png",
+    "benchmarks/sdf_showcase/primitives/3D/ellipsoid.png",
     "benchmarks/sdf_showcase/primitives/3D/capped_cone.png",
-    "benchmarks/sdf_showcase/primitives/2D/rounded_rectangle.png",
-    "benchmarks/sdf_showcase/primitives/2D/hexagon.png",
-    "benchmarks/sdf_showcase/primitives/2D/rectangle.png",
-    "benchmarks/sdf_showcase/primitives/2D/circle.png",
-    "benchmarks/sdf_showcase/primitives/2D/polygon_pentagon.png",
-    "benchmarks/sdf_showcase/primitives/2D/equilateral_triangle.png",
-    "DeepSDFStruct/pretrained_models.py",
-    "DeepSDFStruct/sdf_primitives.py",
-    "DeepSDFStruct/optimization.py",
-    "DeepSDFStruct/lattice_structure.py",
-    "DeepSDFStruct/__init__.py",
-    "DeepSDFStruct/mesh.py",
-    "DeepSDFStruct/sdf_operations.py",
-    "DeepSDFStruct/utils.py",
+    "benchmarks/sdf_showcase/primitives/3D/torus.png",
+    "benchmarks/sdf_showcase/primitives/3D/pyramid.png",
+    "benchmarks/sdf_showcase/primitives/3D/tetrahedron.png",
+    "benchmarks/sdf_showcase/operations/transformations/repeat_sphere.png",
+    "benchmarks/sdf_showcase/operations/transformations/mirror_sphere.png",
+    "benchmarks/sdf_showcase/operations/transformations/circular_array_sphere.png",
+    "benchmarks/sdf_showcase/operations/transformations/dilate_sphere.png",
+    "benchmarks/sdf_showcase/operations/transformations/twist_torus.png",
+    "benchmarks/sdf_showcase/operations/transformations/revolve_circle.png",
+    "benchmarks/sdf_showcase/operations/transformations/shell_sphere.png",
+    "benchmarks/sdf_showcase/operations/boolean/union_sphere_box.png",
+    "benchmarks/sdf_showcase/operations/boolean/difference_sphere_box.png",
+    ".github/copilot-instructions.md",
+    ".github/workflows/copilot-setup-steps.yml",
+    ".github/workflows/publish.yml",
+    ".github/workflows/test.yml",
+    ".github/workflows/docs.yml",
     "DeepSDFStruct/SDF.py",
     "DeepSDFStruct/design_of_experiments.py",
+    "DeepSDFStruct/lattice_structure.py",
+    "DeepSDFStruct/optimization.py",
     "DeepSDFStruct/sampling.py",
-    "DeepSDFStruct/local_shapes.py",
+    "DeepSDFStruct/pretrained_models.py",
+    "DeepSDFStruct/utils.py",
     "DeepSDFStruct/parametrization.py",
+    "DeepSDFStruct/local_shapes.py",
+    "DeepSDFStruct/mesh.py",
     "DeepSDFStruct/torch_spline.py",
+    "DeepSDFStruct/sdf_primitives.py",
+    "DeepSDFStruct/sdf_operations.py",
+    "DeepSDFStruct/__init__.py",
     "DeepSDFStruct/visualization/latent_viewer_cli.py",
     "DeepSDFStruct/visualization/latent_viewer.py",
-    "DeepSDFStruct/flexicubes/__init__.py",
     "DeepSDFStruct/flexicubes/tables.py",
     "DeepSDFStruct/flexicubes/flexicubes.py",
-    "DeepSDFStruct/trained_models/primitives_2d/specs.json",
-    "DeepSDFStruct/trained_models/primitives_2d/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/primitives_2d/LatentCodes/latest.pth",
-    "DeepSDFStruct/trained_models/primitives_2d/ModelParameters/latest.pth",
+    "DeepSDFStruct/flexicubes/__init__.py",
+    "DeepSDFStruct/trained_models/round_cross/specs.json",
+    "DeepSDFStruct/trained_models/round_cross/Logs.pth",
+    "DeepSDFStruct/trained_models/round_cross/ModelParameters/latest.pth",
+    "DeepSDFStruct/trained_models/round_cross/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/round_cross/OptimizerParameters/latest.pth",
     "DeepSDFStruct/trained_models/test_experiment_hierarchical/specs.json",
     "DeepSDFStruct/trained_models/test_experiment_hierarchical/training_summary.json",
     "DeepSDFStruct/trained_models/test_experiment_hierarchical/LatentCodes/latent_code_data_map.json",
-    "DeepSDFStruct/trained_models/test_experiment_homogenization/Logs.png",
+    "DeepSDFStruct/trained_models/primitives/specs.json",
+    "DeepSDFStruct/trained_models/primitives/ModelParameters/latest.pth",
+    "DeepSDFStruct/trained_models/primitives/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/primitives/OptimizerParameters/latest.pth",
+    "DeepSDFStruct/trained_models/analytic_round_cross/specs.json",
+    "DeepSDFStruct/trained_models/analytic_round_cross/ModelParameters/latest.pth",
+    "DeepSDFStruct/trained_models/analytic_round_cross/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/analytic_round_cross/OptimizerParameters/latest.pth",
     "DeepSDFStruct/trained_models/test_experiment_homogenization/specs.json",
     "DeepSDFStruct/trained_models/test_experiment_homogenization/training_summary.json",
-    "DeepSDFStruct/trained_models/test_experiment_homogenization/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/test_experiment_homogenization/LatentCodes/latent_code_data_map.json",
-    "DeepSDFStruct/trained_models/test_experiment_homogenization/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/test_experiment_homogenization/Logs.png",
     "DeepSDFStruct/trained_models/test_experiment_homogenization/ModelParameters/latest.pth",
-    "DeepSDFStruct/trained_models/primitives/specs.json",
-    "DeepSDFStruct/trained_models/primitives/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/primitives/LatentCodes/latest.pth",
-    "DeepSDFStruct/trained_models/primitives/ModelParameters/latest.pth",
+    "DeepSDFStruct/trained_models/test_experiment_homogenization/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/test_experiment_homogenization/LatentCodes/latent_code_data_map.json",
+    "DeepSDFStruct/trained_models/test_experiment_homogenization/OptimizerParameters/latest.pth",
+    "DeepSDFStruct/trained_models/primitives_2d/specs.json",
+    "DeepSDFStruct/trained_models/primitives_2d/ModelParameters/latest.pth",
+    "DeepSDFStruct/trained_models/primitives_2d/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/primitives_2d/OptimizerParameters/latest.pth",
     "DeepSDFStruct/trained_models/test_experiment/specs.json",
     "DeepSDFStruct/trained_models/test_experiment/training_summary.json",
     "DeepSDFStruct/trained_models/test_experiment/LatentCodes/latent_code_data_map.json",
     "DeepSDFStruct/trained_models/chi_and_cross/specs.json",
     "DeepSDFStruct/trained_models/chi_and_cross/Logs.pth",
-    "DeepSDFStruct/trained_models/chi_and_cross/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/chi_and_cross/LatentCodes/latest.pth",
     "DeepSDFStruct/trained_models/chi_and_cross/ModelParameters/latest.pth",
-    "DeepSDFStruct/trained_models/analytic_round_cross/specs.json",
-    "DeepSDFStruct/trained_models/analytic_round_cross/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/analytic_round_cross/LatentCodes/latest.pth",
-    "DeepSDFStruct/trained_models/analytic_round_cross/ModelParameters/latest.pth",
-    "DeepSDFStruct/trained_models/round_cross/specs.json",
-    "DeepSDFStruct/trained_models/round_cross/Logs.pth",
-    "DeepSDFStruct/trained_models/round_cross/OptimizerParameters/latest.pth",
-    "DeepSDFStruct/trained_models/round_cross/LatentCodes/latest.pth",
-    "DeepSDFStruct/trained_models/round_cross/ModelParameters/latest.pth",
-    "DeepSDFStruct/deep_sdf/reconstruction.py",
-    "DeepSDFStruct/deep_sdf/models.py",
+    "DeepSDFStruct/trained_models/chi_and_cross/LatentCodes/latest.pth",
+    "DeepSDFStruct/trained_models/chi_and_cross/OptimizerParameters/latest.pth",
+    "DeepSDFStruct/splinepy_unitcells/cross_lattice.py",
+    "DeepSDFStruct/splinepy_unitcells/chi_3D.py",
+    "DeepSDFStruct/splinepy_unitcells/double_lattice_extruded.py",
+    "DeepSDFStruct/splinepy_unitcells/snappy_3d.py",
+    "DeepSDFStruct/splinepy_unitcells/__init__.py",
     "DeepSDFStruct/deep_sdf/plotting.py",
-    "DeepSDFStruct/deep_sdf/__init__.py",
-    "DeepSDFStruct/deep_sdf/workspace.py",
     "DeepSDFStruct/deep_sdf/create_screenshots_from_plyfiles.py",
+    "DeepSDFStruct/deep_sdf/data.py",
     "DeepSDFStruct/deep_sdf/nn_utils.py",
+    "DeepSDFStruct/deep_sdf/workspace.py",
+    "DeepSDFStruct/deep_sdf/reconstruction.py",
     "DeepSDFStruct/deep_sdf/training.py",
-    "DeepSDFStruct/deep_sdf/data.py",
+    "DeepSDFStruct/deep_sdf/models.py",
+    "DeepSDFStruct/deep_sdf/__init__.py",
     "DeepSDFStruct/deep_sdf/metrics/mesh_to_analytical.py",
     "DeepSDFStruct/deep_sdf/metrics/__init__.py",
-    "DeepSDFStruct/deep_sdf/networks/__init__.py",
+    "DeepSDFStruct/deep_sdf/networks/deep_sdf_decoder.py",
     "DeepSDFStruct/deep_sdf/networks/analytic_round_cross.py",
-    "DeepSDFStruct/deep_sdf/networks/resnet_positional_sdf_decoder.py",
     "DeepSDFStruct/deep_sdf/networks/hierarchical_positional_sdf_decoder.py",
+    "DeepSDFStruct/deep_sdf/networks/resnet_positional_sdf_decoder.py",
     "DeepSDFStruct/deep_sdf/networks/hierarchical_deep_sdf_decoder.py",
-    "DeepSDFStruct/deep_sdf/networks/deep_sdf_decoder.py",
-    "DeepSDFStruct/flexisquares/__init__.py",
+    "DeepSDFStruct/deep_sdf/networks/__init__.py",
     "DeepSDFStruct/flexisquares/flexisquares.py",
     "DeepSDFStruct/flexisquares/tables.py",
-    "DeepSDFStruct/splinepy_unitcells/cross_lattice.py",
-    "DeepSDFStruct/splinepy_unitcells/__init__.py",
-    "DeepSDFStruct/splinepy_unitcells/snappy_3d.py",
-    "DeepSDFStruct/splinepy_unitcells/chi_3D.py",
-    "DeepSDFStruct/splinepy_unitcells/double_lattice_extruded.py",
-    ".github/copilot-instructions.md",
-    ".github/workflows/publish.yml",
-    ".github/workflows/test.yml",
-    ".github/workflows/docs.yml",
-    ".github/workflows/copilot-setup-steps.yml"
+    "DeepSDFStruct/flexisquares/__init__.py",
+    "tests/test_sdf_functions.py",
+    "tests/test_train_model.py",
+    "tests/test_flexisquares.py",
+    "tests/test_DOE.py",
+    "tests/test_sdf_trimesh_comparison.py",
+    "tests/test_mesh_functions.py",
+    "tests/test_lattice_evaluation.py",
+    "tests/test_networks.py",
+    "tests/test_pretrained_models.py",
+    "tests/test_elongate_sdf.py",
+    "tests/test_training_data_ids.py",
+    "tests/test_torch_spline.py",
+    "tests/test_reconstruction.py",
+    "tests/test_structural_optimization.py",
+    "tests/test_generate_dataset.py",
+    "tests/test_sdf_primitives.py",
+    "tests/test_sdf_from_mesh.py",
+    "tests/test_tet_orientation.py",
+    "tests/test_splinepy_unitcells.py",
+    "tests/test_mesh_export.py",
+    "tests/tmp_outputs/temp_file.txt",
+    "tests/data/stanford_bunny.stl",
+    "tests/data/sweep_test_case.stl",
+    "tests/data/example_line_mesh.vtk",
+    "tests/data/example_disconnectd_mesh.inp",
+    "tests/data/cone.stl",
+    "tests/data/circular_balls_test_case.stl",
+    "tests/data/chairs/1024.obj",
+    "tests/data/chairs/README.md",
+    "tests/data/chairs/1005.obj",
+    "docs/conf.py",
+    "docs/api_reference.rst",
+    "docs/Makefile",
+    "docs/make.bat",
+    "docs/qr_code_paper.png",
+    "docs/index.rst",
+    "docs/qr_code_github.png",
+    "docs/readme_images/example_output_03.png",
+    "docs/readme_images/example_output_02.png",
+    "docs/readme_images/example_output_04.png",
+    "docs/readme_images/example_output_01.png"
   ]
 }

deepsdfstruct-1.7.3/DeepSDFStruct.egg-info/scm_version.json

@@ -0,0 +1,8 @@
+{
+  "tag": "1.7.3",
+  "distance": 0,
+  "node": "gb86bba507e44fa89f841390b30b8b07983203d4e",
+  "dirty": false,
+  "branch": "HEAD",
+  "node_date": "2026-07-16"
+}

{deepsdfstruct-1.7.2 → deepsdfstruct-1.7.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: DeepSDFStruct
-Version: 1.7.2
+Version: 1.7.3
 Summary: Deep Implicit Lattice Geometry
 Author-email: Michael Kofler <michael.kofler@tuwien.ac.at>
 Requires-Python: >=3.10

deepsdfstruct-1.7.3/tests/test_tet_orientation.py

@@ -0,0 +1,88 @@
+"""Regression tests for tetrahedron orientation in FlexiCubes output.
+
+FlexiCubes' ``_tetrahedralize`` builds tets from two sub-procedures (surface
+pyramids and interior edges) whose vertex orderings do not share a consistent
+winding, so a large fraction of the elements used to come out inverted
+(negative signed volume). That breaks FEA solvers, which require a positive
+signed volume / Jacobian on every element. The interior sub-procedure can
+additionally emit degenerate (exactly coplanar, zero-volume) tets, which are
+removed during extraction. These tests pin both fixes: every tet returned by
+FlexiCubes must have a strictly positive signed volume.
+"""
+
+import torch
+
+from DeepSDFStruct.flexicubes.flexicubes import FlexiCubes
+from DeepSDFStruct.optimization import tet_signed_vol
+
+
+def _sphere_volume_mesh(res=16, radius=0.7, center=(0.0, 0.0, 0.0)):
+    fc = FlexiCubes(device="cpu")
+    x_nx3, cube_fx8 = fc.construct_voxel_grid(
+        res, bounds=[[-1.0, -1.0, -1.0], [1.0, 1.0, 1.0]]
+    )
+    c = torch.tensor(center, dtype=x_nx3.dtype)
+    s_n = torch.linalg.norm(x_nx3 - c, dim=1) - radius
+    verts, tets, _ = fc(x_nx3, s_n, cube_fx8, res, output_tetmesh=True)
+    return verts, tets
+
+
+def test_orient_tets_flips_inverted_element():
+    """A single inverted tet is flipped to positive signed volume."""
+    verts = torch.tensor(
+        [[0.0, 0.0, 0.0], [1.0, 0.0, 0.0], [0.0, 1.0, 0.0], [0.0, 0.0, 1.0]]
+    )
+    # [0, 1, 2, 3] is positively oriented; [0, 1, 3, 2] is its inversion.
+    tets = torch.tensor([[0, 1, 2, 3], [0, 1, 3, 2]])
+
+    assert (
+        tet_signed_vol(verts, tets) < 0
+    ).any(), "fixture should contain an inversion"
+
+    oriented = FlexiCubes._orient_tets(verts, tets)
+    vols = tet_signed_vol(verts, oriented)
+    assert (vols > 0).all(), f"expected all positive volumes, got {vols.tolist()}"
+    # Orientation is fixed by reordering indices only: |volume| is preserved.
+    assert torch.allclose(vols.abs(), tet_signed_vol(verts, tets).abs())
+
+
+def test_orient_tets_handles_empty():
+    verts = torch.zeros((0, 3))
+    tets = torch.zeros((0, 4), dtype=torch.long)
+    assert FlexiCubes._orient_tets(verts, tets).shape == (0, 4)
+
+
+def test_orient_tets_removes_degenerate_elements():
+    """Zero-volume (coplanar) tets are dropped."""
+    verts = torch.tensor(
+        [
+            [0.0, 0.0, 0.0],
+            [1.0, 0.0, 0.0],
+            [0.0, 1.0, 0.0],
+            [0.0, 0.0, 1.0],
+            [1.0, 1.0, 0.0],  # coplanar with the first three (z = 0 plane)
+        ]
+    )
+    tets = torch.tensor([[0, 1, 2, 3], [0, 1, 2, 4]])
+
+    oriented = FlexiCubes._orient_tets(verts, tets)
+
+    assert oriented.shape == (1, 4)
+    assert (tet_signed_vol(verts, oriented) > 0).all()
+
+
+def test_flexicubes_volume_mesh_has_only_positive_tets():
+    """End-to-end: extracted volume mesh has strictly positive signed volumes."""
+    for center in [(0.0, 0.0, 0.0), (0.13, 0.07, 0.21)]:
+        verts, tets = _sphere_volume_mesh(center=center)
+        assert tets.shape[0] > 0
+        vols = tet_signed_vol(verts, tets)
+        n_bad = int((vols <= 0).sum())
+        assert n_bad == 0, f"{n_bad} non-positive tets for center {center}"
+
+
+if __name__ == "__main__":
+    test_orient_tets_flips_inverted_element()
+    test_orient_tets_handles_empty()
+    test_flexicubes_volume_mesh_has_only_positive_tets()
+    print("ok")