CosmoSim 2.8.0__tar.gz → 2.8.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (655) hide show
  1. {cosmosim-2.8.0 → cosmosim-2.8.1}/PKG-INFO +1 -1
  2. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/CosmoSim.cpp +18 -16
  3. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/CosmoSimPy.cpython-313-x86_64-linux-gnu.so +0 -0
  4. cosmosim-2.8.1/src/CosmoSim/Helper/Parameters.py +51 -0
  5. cosmosim-2.8.1/src/CosmoSim/Helper/__pycache__/Parameters.cpython-313.pyc +0 -0
  6. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/Simulator.py +32 -21
  7. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/__init__.py +27 -17
  8. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/__pycache__/Arguments.cpython-313.pyc +0 -0
  9. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/__pycache__/Image.cpython-313.pyc +0 -0
  10. cosmosim-2.8.1/src/CosmoSim/__pycache__/Simulator.cpython-313.pyc +0 -0
  11. cosmosim-2.8.1/src/CosmoSim/__pycache__/__init__.cpython-313.pyc +0 -0
  12. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/__pycache__/datagen.cpython-313.pyc +0 -0
  13. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/__pycache__/dataset.cpython-313.pyc +0 -0
  14. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/datagen.py +13 -3
  15. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim/roulettegen.py +21 -17
  16. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim.egg-info/PKG-INFO +1 -1
  17. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/CosmoSim.egg-info/SOURCES.txt +2 -2
  18. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/simlib/RouletteModel.cpp +3 -1
  19. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/simlib/SimulatorModel.cpp +22 -14
  20. {cosmosim-2.8.0 → cosmosim-2.8.1}/src/simlib/Source.cpp +1 -1
  21. cosmosim-2.8.0/src/CosmoSim/Parameters.py +0 -50
  22. cosmosim-2.8.0/src/CosmoSim/__pycache__/Parameters.cpython-313.pyc +0 -0
  23. cosmosim-2.8.0/src/CosmoSim/__pycache__/Simulator.cpython-313.pyc +0 -0
  24. cosmosim-2.8.0/src/CosmoSim/__pycache__/__init__.cpython-313.pyc +0 -0
  25. {cosmosim-2.8.0 → cosmosim-2.8.1}/CMakeLists.txt +0 -0
  26. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/.gitignore +0 -0
  27. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/README.md +0 -0
  28. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/cluster.toml +0 -0
  29. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/dataset.toml +0 -0
  30. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/dataset2.toml +0 -0
  31. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/debug.csv +0 -0
  32. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/mask.csv +0 -0
  33. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/performance.py +0 -0
  34. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/roulletedemo.csv +0 -0
  35. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/sersic.csv +0 -0
  36. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/sie.csv +0 -0
  37. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/sis.csv +0 -0
  38. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/triangle.csv +0 -0
  39. {cosmosim-2.8.0 → cosmosim-2.8.1}/Datasets/triangle2.csv +0 -0
  40. {cosmosim-2.8.0 → cosmosim-2.8.1}/LICENSE +0 -0
  41. {cosmosim-2.8.0 → cosmosim-2.8.1}/MANIFEST.in +0 -0
  42. {cosmosim-2.8.0 → cosmosim-2.8.1}/README.md +0 -0
  43. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/.gitignore +0 -0
  44. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/Makefile +0 -0
  45. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/.gitignore +0 -0
  46. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/Makefile +0 -0
  47. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/amreg200.slurm +0 -0
  48. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/amreg50.slurm +0 -0
  49. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/pythonenv.config +0 -0
  50. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/short.slurm +0 -0
  51. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/sie-short.slurm +0 -0
  52. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/sie-time.slurm +0 -0
  53. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/sim.slurm +0 -0
  54. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/amplitudes/time.slurm +0 -0
  55. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/bin/compareimages.sh +0 -0
  56. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/bin/config.sh +0 -0
  57. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/bin/makeimages.sh +0 -0
  58. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/bin/montageimages.sh +0 -0
  59. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/Makefile +0 -0
  60. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline.config +0 -0
  61. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl01.png +0 -0
  62. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl02.png +0 -0
  63. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl03.png +0 -0
  64. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl11.png +0 -0
  65. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl12.png +0 -0
  66. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/dbl13.png +0 -0
  67. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/sie01.png +0 -0
  68. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/baseline20241016/sis01.png +0 -0
  69. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-raytrace/local.config +0 -0
  70. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/Makefile +0 -0
  71. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline.config +0 -0
  72. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl01.png +0 -0
  73. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl02.png +0 -0
  74. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl03.png +0 -0
  75. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl11.png +0 -0
  76. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl12.png +0 -0
  77. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/dbl13.png +0 -0
  78. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/sie01.png +0 -0
  79. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241016/sis01.png +0 -0
  80. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl01.png +0 -0
  81. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl02.png +0 -0
  82. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl03.png +0 -0
  83. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl11.png +0 -0
  84. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl12.png +0 -0
  85. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/dbl13.png +0 -0
  86. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/sie01.png +0 -0
  87. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/baseline20241018/sis01.png +0 -0
  88. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-roulette/local.config +0 -0
  89. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/Makefile +0 -0
  90. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline.config +0 -0
  91. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl01.png +0 -0
  92. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl02.png +0 -0
  93. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl03.png +0 -0
  94. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl11.png +0 -0
  95. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl12.png +0 -0
  96. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/dbl13.png +0 -0
  97. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/sie01.png +0 -0
  98. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/baseline20241016/sis01.png +0 -0
  99. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-raytrace/local.config +0 -0
  100. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/Makefile +0 -0
  101. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline.config +0 -0
  102. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl01.png +0 -0
  103. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl02.png +0 -0
  104. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl03.png +0 -0
  105. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl11.png +0 -0
  106. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl12.png +0 -0
  107. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/dbl13.png +0 -0
  108. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/sie01.png +0 -0
  109. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/baseline20241016/sis01.png +0 -0
  110. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster-sampled-roulette/local.config +0 -0
  111. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/cluster.csv +0 -0
  112. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/dataset.csv +0 -0
  113. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/Makefile +0 -0
  114. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-e06.png +0 -0
  115. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-e07.png +0 -0
  116. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-e08.png +0 -0
  117. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-e09.png +0 -0
  118. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-e10.png +0 -0
  119. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-s01.png +0 -0
  120. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-s02.png +0 -0
  121. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-s03.png +0 -0
  122. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-s04.png +0 -0
  123. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-s05.png +0 -0
  124. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/baseline20230705/exactpm-t011.png +0 -0
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  129. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/exactpm/debug.csv +0 -0
  130. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/makefile-template +0 -0
  131. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/Makefile +0 -0
  132. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline.config +0 -0
  133. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie01.png +0 -0
  134. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie02.png +0 -0
  135. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie03.png +0 -0
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  138. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie12.png +0 -0
  139. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie13.png +0 -0
  140. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie14.png +0 -0
  141. {cosmosim-2.8.0 → cosmosim-2.8.1}/RegressionTest/new-raytrace/baseline20241016/sie21.png +0 -0
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@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: CosmoSim
3
- Version: 2.8.0
3
+ Version: 2.8.1
4
4
  Summary: Simulator of Gravitational Lenses
5
5
  Author: Hans Georg Schaathun et al
6
6
  Author-email: Hans Georg Schaathun <georg+github@schaathun.net>
@@ -14,8 +14,10 @@
14
14
 
15
15
 
16
16
  CosmoSim::CosmoSim() {
17
- std::cout << "CosmoSim Constructor\n" ;
18
- std::cout << "Number of CPU cores: " << std::thread::hardware_concurrency() << std::endl ;
17
+ if (DEBUG) {
18
+ std::cout << "CosmoSim Constructor\n" ;
19
+ std::cout << "Number of CPU cores: " << std::thread::hardware_concurrency() << std::endl ;
20
+ }
19
21
  rPos = -1 ;
20
22
  }
21
23
 
@@ -124,24 +126,24 @@ void CosmoSim::setModelMode(int m) {
124
126
  }
125
127
  void CosmoSim::setLensMode(int m) {
126
128
  if ( lensmode != m ) {
127
- std::cout << "[CosmoSim.cpp] setLensMode(" << lensmode
129
+ if (DEBUG) std::cout << "[CosmoSim.cpp] setLensMode(" << lensmode
128
130
  << " -> " << m << ")\n" ;
129
131
  lensmode = m ;
130
132
  modelchanged = 1 ;
131
133
  } else {
132
- std::cout << "[CosmoSim.cpp] setLensMode(" << lensmode << ") unchanged\n" ;
134
+ if (DEBUG) std::cout << "[CosmoSim.cpp] setLensMode(" << lensmode << ") unchanged\n" ;
133
135
  }
134
136
  }
135
137
  void CosmoSim::setLens(PsiFunctionLens *l) {
136
- std::cout << "[CosmoSim::setLens]\n" ;
138
+ if (DEBUG) std::cout << "[CosmoSim::setLens]\n" ;
137
139
  lensmode = CSIM_PSI_CLUSTER ;
138
140
  modelchanged = 1 ;
139
141
  lens = psilens = l ;
140
- std::cout << "[CosmoSim::setLens] returning\n" ;
142
+ if (DEBUG) std::cout << "[CosmoSim::setLens] returning\n" ;
141
143
  }
142
144
  void CosmoSim::setSampled(int m) {
143
145
  if ( sampledlens != m ) {
144
- std::cout << "[CosmoSim.cpp] setSampled(" << m << " -> " << m << ")\n" ;
146
+ if (DEBUG) std::cout << "[CosmoSim.cpp] setSampled(" << m << " -> " << m << ")\n" ;
145
147
  sampledlens = m ;
146
148
  modelchanged = 1 ;
147
149
  }
@@ -152,10 +154,10 @@ void CosmoSim::initLens() {
152
154
  if (DEBUG) std::cout << "[initLens] ellipseratio = " << ellipseratio << "\n" ;
153
155
  if ( ! modelchanged ) return ;
154
156
  if ( sim ) {
155
- std::cout << "[initLens] delete sim\n" ;
157
+ if (DEBUG) std::cout << "[initLens] delete sim\n" ;
156
158
  delete sim ;
157
159
  }
158
- std::cout << "switch( lensmode )\n" ;
160
+ if (DEBUG) std::cout << "switch( lensmode )\n" ;
159
161
  switch ( lensmode ) {
160
162
  case CSIM_PSI_CLUSTER:
161
163
  std::cout << "[initLens] ClusterLens - no further init\n" ;
@@ -181,9 +183,9 @@ void CosmoSim::initLens() {
181
183
  std::cerr << "No such lens model!\n" ;
182
184
  throw NotImplemented();
183
185
  }
184
- std::cout << "[initLens] instantiated lens\n" ;
186
+ if (DEBUG) std::cout << "[initLens] instantiated lens\n" ;
185
187
 
186
- std::cout << "switch( modelmode )\n" ;
188
+ if (DEBUG) std::cout << "switch( modelmode )\n" ;
187
189
  switch ( modelmode ) {
188
190
  case CSIM_MODEL_POINTMASS_ROULETTE:
189
191
  if (DEBUG) std::cout << "Running Roulette Point Mass Lens (mode="
@@ -249,18 +251,18 @@ void CosmoSim::setResolution(int sz ) {
249
251
  basesize = sz ;
250
252
  }
251
253
  int CosmoSim::setSource( Source *src ) {
252
- std::cout << "[setSource]\n" ;
254
+ if (DEBUG) std::cout << "[setSource]\n" ;
253
255
  srcmode = CSIM_SOURCE_EXTERN ;
254
256
  this->src = src ;
255
257
  return 1 ;
256
258
  }
257
259
  bool CosmoSim::runSim() {
258
- std::cout << "[runSim] starting \n" ;
260
+ if (DEBUG) std::cout << "[runSim] starting \n" ;
259
261
 
260
262
  // Configure the lens
261
263
  initLens() ; // initLens() implements changing lens and model modes
262
264
  if ( sim == NULL ) {
263
- std::cout << "Simulator not initialised after initLens().\n" ;
265
+ if (DEBUG) std::cout << "Simulator not initialised after initLens().\n" ;
264
266
  throw std::logic_error("Simulator not initialised") ;
265
267
  }
266
268
  configLens() ; // configLens() implements parameter changes
@@ -284,13 +286,13 @@ bool CosmoSim::runSim() {
284
286
  // Py_BEGIN_ALLOW_THREADS
285
287
  if (DEBUG) std::cout << "[runSim] thread section\n" ;
286
288
  if ( sim == NULL ) {
287
- std::cout << "Simulator not initialised in thread section.\n" ;
289
+ if (DEBUG) std::cout << "Simulator not initialised in thread section.\n" ;
288
290
  throw std::logic_error("Simulator not initialised") ;
289
291
  }
290
292
  sim->update() ;
291
293
  // Py_END_ALLOW_THREADS
292
294
 
293
- std::cout << "[runSim] completes\n" ;
295
+ if (DEBUG) std::cout << "[runSim] completes\n" ;
294
296
  return true ;
295
297
  }
296
298
  bool CosmoSim::moveSim( double rot, double scale ) {
@@ -0,0 +1,51 @@
1
+ # (C) 2024,2026: Hans Georg Schaathun <georg@schaathun.net>
2
+
3
+ class Parameters:
4
+ """
5
+ The Parameters class wraps the commandline arguments as well as a CSV
6
+ row as a dict-like object.
7
+
8
+ The constructor can take either an `ArgumentParser` object (`args`) or
9
+ a flat `dict` structure (`cfg`) as well as a nested `dict` (`hcfg`)
10
+ as given by a TOML file. Only selected parameters are used from the
11
+ TOML format, and they will never override `args`/`cfg` parameters.
12
+
13
+ For executable scripts, one can use `CosmoParser` object directly as
14
+ the `args` argument, in addition to a TOML file if available.
15
+ For API use, one should normally use the `cfg` argument.
16
+
17
+ To add a row from the dataset, use the `serRow()` method. Values
18
+ from the row will always override other parameters.
19
+ """
20
+ def __init__(self,args=None,cfg=None,hcfg=None):
21
+ if args:
22
+ self._args = args.__dict__
23
+ if cfg is not None:
24
+ raise ValueError( "Cannot specify both args and cfg." )
25
+ elif cfg:
26
+ self._args = cfg
27
+ else:
28
+ self._args = {}
29
+ self._row = {}
30
+ if hcfg:
31
+ cfg1 = hcfg["simulator"]
32
+ if "cropsize" not in self._args:
33
+ self._args.cropsize = cfg1.get( "cropsize", 256 )
34
+ if "imagesize" not in self._args:
35
+ self._args.imagesize = cfg1.get( "imagesize", 512 )
36
+ if "source" not in self._args:
37
+ try:
38
+ self._args.source = hcfg["source"]["mode"]
39
+ except:
40
+ self._args.source = None
41
+ def setRow(self,row):
42
+ self._row = row
43
+ def get(self,key,default=None,verbose=0):
44
+ r = self._args.get( key, default )
45
+ r = self._row.get(key,r)
46
+ return r
47
+ def __getitem__(self,key):
48
+ return self.get(key)
49
+ def __setitem__(self,key,v):
50
+ self._row[key] = v
51
+
@@ -31,7 +31,7 @@ from . import CosmoSim
31
31
  from .Image import centreImage, drawAxes, crop, annotatePoint, annotateCircle, translateImage
32
32
 
33
33
  from .Arguments import CosmoParser
34
- from .Parameters import Parameters
34
+ from . import Parameters
35
35
  import pandas as pd
36
36
 
37
37
  defaultoutcols = [ "index", "filename", "source", "lens", "chi", "R", "phi", "einsteinR", "sigma", "sigma2", "theta", "x", "y" ]
@@ -41,20 +41,23 @@ class GenericSim:
41
41
  This is a generic superclass for shared methods.
42
42
  """
43
43
  def __init__(self,param=None,row=None,name=None,outcols=None,verbose=1):
44
- if verbose > 0: print( "[GenericSim] init ..." )
44
+ if verbose > 1: print( "[GenericSim] init ..." )
45
45
  self.verbose = verbose
46
46
 
47
47
  self.outcols = outcols
48
48
 
49
49
  self.name = name
50
50
  if param is None:
51
- print( "[GenericSim] No parameters give. Using defaults" )
51
+ if verbose: print( "[GenericSim] No parameters give. Using defaults" )
52
52
  param = Parameters()
53
53
  self.param = param
54
54
  self.directory = param.get( "directory" )
55
55
  if self.directory:
56
56
  os.makedirs( self.directory, exist_ok=True )
57
57
 
58
+ if self.verbose > 2:
59
+ print( "[GenericSim] xireference =", self.param.get( "xireference" ) )
60
+
58
61
  def setParameters(self,row):
59
62
  """
60
63
  Reset parameters in the backend simulator, using the given data row.
@@ -67,9 +70,9 @@ class GenericSim:
67
70
  Run the simulator with the given data row.
68
71
  """
69
72
  if not row is None:
70
- if self.verbose: print( "[initSim] using row" )
73
+ if self.verbose > 1: print( "[initSim] using row" )
71
74
  self.setParameters( row )
72
- if self.verbose: print( "index", row.get( "index", None ) )
75
+ if self.verbose > 1: print( "index", row.get( "index", None ) )
73
76
  self.param.setRow( row )
74
77
  try:
75
78
  name = row.name.split(".")[0]
@@ -77,17 +80,18 @@ class GenericSim:
77
80
  name = row["filename"].split(".")[0]
78
81
  self.row = row
79
82
  self.name = name
80
- elif self.verbose: print( "[initSim] row is None" )
83
+ elif self.verbose > 1: print( "[initSim] row is None" )
81
84
  if self.name is None:
82
85
  self.name = self.param.get( "name" )
83
- if self.verbose: print( "[initSim] item name:", self.name )
86
+ if self.verbose>1: print( "[initSim] item name:", self.name )
84
87
 
85
88
  self.runSim()
86
89
 
87
90
  self.image = self.getDistortedImage( )
88
91
  (self.centreimage,self.centrepoint) = centreImage(self.image)
89
- print( "[datagen.py] Centre Point", self.centrepoint,
90
- "(Centre of Luminence in Planar Co-ordinates)" )
92
+ if self.verbose: print(
93
+ "[datagen.py] Centre Point", self.centrepoint,
94
+ "(Centre of Luminence in Planar Co-ordinates)" )
91
95
  def getDistortedImage(self):
92
96
  return self.sim.getDistortedImage(
93
97
  critical=self.param.get( "criticalcurves" ),
@@ -95,11 +99,11 @@ class GenericSim:
95
99
  def setParameters(self):
96
100
  raise Exception("Not implemented")
97
101
  def runSim(self):
98
- if self.verbose: print( "[runSim]" )
102
+ if self.verbose>2: print( "[runSim]" )
99
103
  self.sim.makeSource( self.param )
100
- if self.verbose > 0: print ( "[initSim] ready for runSim()\n" ) ;
104
+ if self.verbose > 1: print ( "[GenericSim] ready for runSim()\n" ) ;
101
105
  self.sim.runSim()
102
- if self.verbose > 0: print ( "[initSim] runSim() completed\n" ) ;
106
+ if self.verbose > 1: print ( "[GenericSim] runSim() completed\n" ) ;
103
107
  def getActual(self):
104
108
  param = self.param
105
109
  name = self.name
@@ -114,8 +118,12 @@ class GenericSim:
114
118
  cv.imwrite(fn,im)
115
119
  def getAnnotated(self,centred=None,cropsize=None):
116
120
  """
117
- Stub for a future function to get an image with annotations.
121
+ Get an image with annotations showing key points and the convergence ring.
122
+ This is incomplete and should be extended with addition annotations and
123
+ options.
118
124
  """
125
+ if centred is not None:
126
+ raise NotImplementedError("centred option for getAnnotated() is not implemented yet.")
119
127
  im = self.sim.getDistortedImage( critical=True )
120
128
  im = annotatePoint( im, self.centrepoint, colour=( 64, 255, 64 ) )
121
129
  pt = self.sim.getXiOffset( (0,0) )
@@ -123,18 +131,21 @@ class GenericSim:
123
131
  x, y = pt
124
132
  convradius = np.sqrt( x*x + y*y )
125
133
  im = annotateCircle( im, pt, radius=convradius, colour=( 64, 64, 255 ) )
134
+ if cropsize is None: cropsize = self.param.get( "cropsize" )
135
+ if cropsize:
136
+ im = crop(im,int( cropsize ) )
126
137
  return im
127
- def getImage(self,centred=None,cropsize=None):
128
- param = self.param
129
- if centred is None: centred = param.get( "centred" )
138
+ def getImage(self,centred=None,cropsize=None,reflines=None):
139
+ if centred is None: centred = self.param.get( "centred" )
140
+ if reflines is None: reflines = self.param.get( "reflines" )
130
141
  if centred:
131
- im = self.centreimage
142
+ im = self.centreimage.copy()
132
143
  else:
133
- im = self.image
134
- if cropsize is None: cropsize = param.get( "cropsize" )
144
+ im = self.image.copy()
145
+ if cropsize is None: cropsize = self.param.get( "cropsize" )
135
146
  if cropsize:
136
- im = crop(im,int( param.get( "cropsize" ) ))
137
- if param.get( "reflines" ):
147
+ im = crop(im,int( cropsize ) )
148
+ if reflines:
138
149
  drawAxes(im)
139
150
  return im
140
151
  def saveImage(self,name=None):
@@ -1,4 +1,4 @@
1
- # (C) 2022-24: Hans Georg Schaathun <georg@schaathun.net>
1
+ # (C) 2022-26: Hans Georg Schaathun <georg@schaathun.net>
2
2
 
3
3
  """
4
4
  The CosmoSim package comprises several components, including scripts,
@@ -11,24 +11,28 @@ import threading as th
11
11
  import os, sys
12
12
 
13
13
  import traceback
14
+ from .Helper.Parameters import Parameters
14
15
 
15
- __version__ = "2.8.0"
16
+ __version__ = "2.8.1"
16
17
 
17
18
  ModelSpec = cs.ModelSpec
18
19
  SourceSpec = cs.SourceSpec
19
20
  PsiSpec = cs.PsiSpec
20
21
  LightProfileSpec = cs.LightProfileSpec
22
+ Point = cs.Point
21
23
 
22
24
  class RouletteRegenerator(cs.RouletteRegenerator):
23
- def __init__(self,*a,**kw):
25
+ def __init__(self,*a,verbose=1,**kw):
24
26
  super().__init__(*a,**kw)
27
+ self.verbose = verbose
25
28
  self.bgcolour = 0
26
29
  def makeSource(self,param):
27
30
  if param.get( "imagesize" ) is None:
28
31
  raise Exception( "Image size not specified" )
29
32
  self._src = makeSource(param)
30
33
  self.setSource( self._src )
31
- print( "RouletteRegenerator.makeSource() returns" )
34
+ if self.verbose>1:
35
+ print( "RouletteRegenerator.makeSource() returns" )
32
36
  def getDistortedImage(self,reflines=False,critical=False,mask=False,showmask=False):
33
37
  """
34
38
  Return the Distorted Image from the simulator as a numpy array.
@@ -48,12 +52,12 @@ class RouletteRegenerator(cs.RouletteRegenerator):
48
52
  raise e
49
53
  if im.shape[2] == 1 : im.shape = im.shape[:2]
50
54
  return np.maximum(im,self.bgcolour)
51
- Point = cs.Point
52
55
 
53
- def makeSourceConstellation(src,size):
56
+ def makeSourceConstellation(src,size,verbose=1):
54
57
  ss = src.split(";")
55
58
  sl = [ x.split("/") for x in ss ]
56
- print( "makeSourceConstellation: src=", src, "size=", size, "sl=", sl )
59
+ if verbose:
60
+ print( "makeSourceConstellation: src=", src, "size=", size, "sl=", sl )
57
61
  constellation = SourceConstellation(size)
58
62
  for s in sl:
59
63
  mode = sourceDict[s[0]]
@@ -71,24 +75,27 @@ def makeSourceConstellation(src,size):
71
75
  raise Exception( "Unknown Source Mode" )
72
76
 
73
77
  constellation.addSource( constituent, float(s[1]), float(s[2]))
74
- print( "makeSourceConstellation() returns" )
78
+ if verbose>1:
79
+ print( "makeSourceConstellation() returns" )
75
80
  return constellation
76
81
 
77
- def makeSource(param):
82
+ def makeSource(param,verbose=0):
78
83
  """
79
84
  Factory function to create a Source object given the parameter list.
80
85
  """
81
86
  size = int( param.get( "imagesize" ) )
82
87
  src = param.get("source")
83
88
  ltprf0 = param.get( "lightprofile", None )
84
- print( f"[makeSource] src={src}, ltprf0={ltprf0}" )
89
+ if verbose:
90
+ print( f"[makeSource] src={src}, ltprf0={ltprf0}" )
85
91
  if src.find("/") < 0:
86
92
  mode = sourceDict[src]
87
93
  if ltprf0 is None:
88
94
  ltprf = lightProfileDict.get( src, LightProfileSpec.Gaussian )
89
95
  else:
90
96
  ltprf = lightProfileDict.get( ltprf0, LightProfileSpec.Gaussian )
91
- print( f"[makeSource] mode={mode}, ltprf={ltprf}" )
97
+ if verbose:
98
+ print( f"[makeSource] mode={mode}, ltprf={ltprf}" )
92
99
  if mode == sourceDict.get( "Spherical" ):
93
100
  r = cs.SphericalSource( size, float(param.get( "sigma" )), ltprf)
94
101
  elif mode == sourceDict.get( "Ellipsoid" ):
@@ -103,8 +110,10 @@ def makeSource(param):
103
110
  raise Exception( "Unknown Source Mode" )
104
111
  else:
105
112
  r = makeSourceConstellation(src,size)
106
- print( "makeSource() - makeSourceConstellation() has returned" )
107
- print( "makeSource() returns" )
113
+ if verbose:
114
+ print( "makeSource() - makeSourceConstellation() has returned" )
115
+ if verbose>1:
116
+ print( "makeSource() returns" )
108
117
  return r
109
118
 
110
119
  lensDict = {
@@ -211,9 +220,10 @@ def getSourceFileName():
211
220
 
212
221
 
213
222
  class SourceConstellation(cs.SourceConstellation):
214
- def __init__(self,size):
223
+ def __init__(self,size,verbose=1):
215
224
  self._sources = []
216
- print( "SourceConstellation.__init__" )
225
+ self.verbose = 1
226
+ if verbose: print( "SourceConstellation.__init__" )
217
227
  super().__init__(size)
218
228
  def addSource(self,src,*a):
219
229
  self._sources.append(src)
@@ -335,8 +345,8 @@ class CosmoSim(cs.CosmoSim):
335
345
  print( f"setModelMode({s})")
336
346
  # traceback.print_stack()
337
347
  return super().setModelMode( int( modelDict[s] ) )
338
- def setConfigMode(self,s):
339
- print( f"setConfigMode({s})")
348
+ def setConfigMode(self,s,verbose=0):
349
+ if verbose > 1: print( f"setConfigMode({s})")
340
350
  (model,lens,sampleMode) = configDict[s]
341
351
  super().setSampled( int( sampleMode ) )
342
352
  super().setLensMode( int( lens ) )
@@ -19,7 +19,7 @@ from .Image import centreImage, drawAxes, crop, annotatePoint, annotateCircle, t
19
19
  from . import getMSheaders,CosmoSim,__version__
20
20
 
21
21
  from .Arguments import CosmoParser
22
- from .Parameters import Parameters
22
+ from . import Parameters
23
23
  import pandas as pd
24
24
 
25
25
  defaultoutcols = [ "index", "filename", "source", "lens", "chi", "R", "phi", "einsteinR", "sigma", "sigma2", "theta", "x", "y" ]
@@ -69,9 +69,15 @@ class SimImage(GenericSim):
69
69
  def __init__(self,sim=None,row=None,**kw):
70
70
  super().__init__(**kw)
71
71
 
72
- if sim is None: sim = CosmoSim()
72
+ if sim is None:
73
+ sim = CosmoSim()
74
+ msk = self.param.get( "mask" )
75
+ if msk is not None:
76
+ sim.setMaskMode( msk )
73
77
  self.sim = sim
74
78
  self.initSim(row)
79
+ if self.verbose>2:
80
+ print( "[SimImage] Verbosity", self.verbose )
75
81
 
76
82
  def setParameters(self,row):
77
83
  """
@@ -81,7 +87,7 @@ class SimImage(GenericSim):
81
87
  return setParameters(self.sim,row)
82
88
  def getData(self):
83
89
  sim = self.sim
84
- if self.param( "centred" ):
90
+ if self.param.get( "centred" ):
85
91
  centrepoint = self.centrepoint
86
92
  else:
87
93
  centrepoint = (0,0)
@@ -94,8 +100,12 @@ class SimImage(GenericSim):
94
100
  offset = sim.getOffset(centrepoint=centrepoint)
95
101
  xioffset = sim.getXiOffset(centrepoint)
96
102
  if xireference:
103
+ if self.verbose>1:
104
+ print( "[xireference=True] nterms =", maxm )
97
105
  ab = sim.getAlphaBetas(maxm)
98
106
  else:
107
+ if self.verbose>1:
108
+ print( "[xireference=False] nterms =", maxm )
99
109
  ab = sim.getAlphaBetas(maxm,pt=centrepoint)
100
110
  relcols = [ "centreX", "centreY",
101
111
  "reletaX", "reletaY",
@@ -12,7 +12,7 @@ import numpy as np
12
12
  import pandas as pd
13
13
 
14
14
  from .Image import drawAxes
15
- from .Parameters import Parameters
15
+ from . import Parameters
16
16
  from .datagen import crop
17
17
 
18
18
  from .Arguments import CosmoParser
@@ -33,13 +33,12 @@ class Resim(GenericSim):
33
33
  """
34
34
  Note that `args` overrides Boolean parameters.
35
35
  """
36
- print( "[Resim]", kw.get( "param" ) )
37
36
  super().__init__(**kw)
38
- if self.verbose: print( "[Resim.__init__]" )
37
+ if self.verbose>2: print( "[Resim.__init__]" )
39
38
  if sim is None: sim = RouletteRegenerator()
40
39
  self.xireference = self.param.get( "xireference" )
41
40
  self.nterms = self.param.get( "nterms" )
42
- if self.verbose: print( "[Resim] nterms =", self.nterms )
41
+ if self.verbose>1: print( "[Resim] nterms =", self.nterms )
43
42
 
44
43
  self.sim = sim
45
44
  self.loadData( row )
@@ -56,7 +55,7 @@ class Resim(GenericSim):
56
55
  print( "Image shape", (m,n) )
57
56
  raise e
58
57
  def runSim( self ):
59
- if self.verbose: print( "[Resim.runSim]" )
58
+ if self.verbose>2: print( "[Resim.runSim]" )
60
59
  self.sim.makeSource( self.param )
61
60
  self.sim.update()
62
61
  def getDistortedImage(self):
@@ -66,33 +65,36 @@ class Resim(GenericSim):
66
65
  Reset the parameters in the backend simulator, using the
67
66
  give data row.
68
67
  """
69
- if self.verbose: print( "[setParameters]" )
68
+ if self.verbose>2: print( "[setParameters]" )
70
69
  maxm = self.coefs.getNterms()
71
70
  rsim = self.sim
72
71
 
73
72
  if self.xireference:
74
- print( "xi", row["xiX"], row["xiY"], row["sigma"] )
73
+ if self.verbose:
74
+ print( "xi", row["xiX"], row["xiY"], row["sigma"] )
75
75
  pt = (0,0)
76
76
  else:
77
- print( "Offset", row["offsetX"], row["offsetY"], row["sigma"] )
77
+ if self.verbose:
78
+ print( "Offset", row["offsetX"], row["offsetY"], row["sigma"] )
78
79
  pt = ( row["offsetX"], row["offsetY"] )
79
80
  rsim.setCentrePy( *pt )
80
81
  print( "Initialised simulator at point", pt )
81
82
 
82
83
  for m in range(maxm+1):
83
84
  for s in range((m+1)%2, m+2, 2):
84
- print( "row is", type( row ) )
85
+ if self.verbose>1: print( "row is", type( row ) )
85
86
  alpha = row.get( f"alpha[{m}][{s}]", 0.0 )
86
87
  beta = row.get( f"beta[{m}][{s}]", 0.0 )
87
- print( "alpha/beta are", type( alpha ), type( beta ) )
88
- print( f"alpha[{m}][{s}] = {alpha}\t\tbeta[{m}][{s}] = {beta}." )
88
+ if self.verbose>1:
89
+ print( "alpha/beta are", type( alpha ), type( beta ) )
90
+ print( f"alpha[{m}][{s}] = {alpha}\t\tbeta[{m}][{s}] = {beta}." )
89
91
  rsim.setAlphaXi( m, s, alpha )
90
92
  rsim.setBetaXi( m, s, beta )
91
93
  self.param.setRow( row )
92
- if self.verbose:
94
+ if self.verbose>1:
93
95
  print( "Source spec:", self.param.get( "source" ) )
94
96
  def loadData( self, csvfile ):
95
- if self.verbose: print( "[loadData]" )
97
+ if self.verbose>2: print( "[loadData]" )
96
98
  if isinstance(csvfile,pd.DataFrame):
97
99
  print( "Received dataframe for resimulation" )
98
100
  frame = csvfile
@@ -105,16 +107,18 @@ class Resim(GenericSim):
105
107
  print( "Load CSV file:", csvfile )
106
108
  frame = pd.read_csv(csvfile,index_col="filename")
107
109
  cols = frame.columns
108
- print( "columns:", cols )
110
+ if self.verbose>1: print( "columns:", cols )
109
111
 
110
112
  coefs = RouletteAmplitudes(cols)
111
- print( "Number of roulette terms: ", coefs.getNterms() )
113
+ if self.verbose:
114
+ print( "Number of roulette terms: ", coefs.getNterms() )
112
115
  if self.nterms:
113
- print( "[Resim.loadData()] Set nterms from self", int(self.nterms) )
116
+ if self.verbose:
117
+ print( "[Resim.loadData()] Set nterms from self", int(self.nterms) )
114
118
  self.sim.setNterms( int(self.nterms) )
115
119
  else:
116
120
  nterms = coefs.getNterms()
117
- print( "[Resim.loadData()] Set nterms from coefs", nterms )
121
+ if self.verbose: print( "[Resim.loadData()] Set nterms from coefs", nterms )
118
122
  self.sim.setNterms( nterms )
119
123
  self.coefs = coefs
120
124
  self.cols = cols
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: CosmoSim
3
- Version: 2.8.0
3
+ Version: 2.8.1
4
4
  Summary: Simulator of Gravitational Lenses
5
5
  Author: Hans Georg Schaathun et al
6
6
  Author-email: Hans Georg Schaathun <georg+github@schaathun.net>
@@ -594,7 +594,6 @@ src/CosmoSim/CosmoSimPy.cpython-313-x86_64-linux-gnu.so
594
594
  src/CosmoSim/GUI.py
595
595
  src/CosmoSim/Image.py
596
596
  src/CosmoSim/Makefile
597
- src/CosmoSim/Parameters.py
598
597
  src/CosmoSim/RouletteAmplitudes.py
599
598
  src/CosmoSim/Simulator.py
600
599
  src/CosmoSim/View.py
@@ -613,9 +612,10 @@ src/CosmoSim.egg-info/SOURCES.txt
613
612
  src/CosmoSim.egg-info/dependency_links.txt
614
613
  src/CosmoSim.egg-info/requires.txt
615
614
  src/CosmoSim.egg-info/top_level.txt
615
+ src/CosmoSim/Helper/Parameters.py
616
+ src/CosmoSim/Helper/__pycache__/Parameters.cpython-313.pyc
616
617
  src/CosmoSim/__pycache__/Arguments.cpython-313.pyc
617
618
  src/CosmoSim/__pycache__/Image.cpython-313.pyc
618
- src/CosmoSim/__pycache__/Parameters.cpython-313.pyc
619
619
  src/CosmoSim/__pycache__/Simulator.cpython-313.pyc
620
620
  src/CosmoSim/__pycache__/__init__.cpython-313.pyc
621
621
  src/CosmoSim/__pycache__/datagen.cpython-313.pyc
@@ -1,5 +1,7 @@
1
1
  /* (C) 2023: Hans Georg Schaathun <georg@schaathun.net> */
2
2
 
3
+ #define DEBUG 1
4
+
3
5
  #include "cosmosim/Roulette.h"
4
6
  #include "simaux.h"
5
7
 
@@ -9,7 +11,7 @@
9
11
  RouletteModel::RouletteModel() :
10
12
  SimulatorModel::SimulatorModel()
11
13
  {
12
- std::cout << "Instantiating RouletteModel ... \n" ;
14
+ if (DEBUG) std::cout << "Instantiating RouletteModel ... \n" ;
13
15
  }
14
16
 
15
17
  void RouletteModel::setLens( Lens *l ) {