CUQIpy 1.2.0.post0.dev294__tar.gz → 1.2.0.post0.dev314__tar.gz

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  1. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/PKG-INFO +1 -1
  2. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/PKG-INFO +1 -1
  3. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/_version.py +3 -3
  4. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_langevin_algorithm.py +6 -3
  5. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/geometry/_geometry.py +3 -0
  6. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/SOURCES.txt +0 -0
  7. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/dependency_links.txt +0 -0
  8. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/requires.txt +0 -0
  9. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/top_level.txt +0 -0
  10. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/LICENSE +0 -0
  11. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/README.md +0 -0
  12. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/__init__.py +0 -0
  13. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/_messages.py +0 -0
  14. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/array/__init__.py +0 -0
  15. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/array/_array.py +0 -0
  16. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/config.py +0 -0
  17. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/__init__.py +0 -0
  18. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/_data.py +0 -0
  19. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/astronaut.npz +0 -0
  20. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/camera.npz +0 -0
  21. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/cat.npz +0 -0
  22. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/cookie.png +0 -0
  23. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/data/satellite.mat +0 -0
  24. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/density/__init__.py +0 -0
  25. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/density/_density.py +0 -0
  26. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/diagnostics.py +0 -0
  27. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/__init__.py +0 -0
  28. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_beta.py +0 -0
  29. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_cauchy.py +0 -0
  30. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_cmrf.py +0 -0
  31. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_custom.py +0 -0
  32. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_distribution.py +0 -0
  33. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_gamma.py +0 -0
  34. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_gaussian.py +0 -0
  35. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_gmrf.py +0 -0
  36. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_inverse_gamma.py +0 -0
  37. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_joint_distribution.py +0 -0
  38. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_laplace.py +0 -0
  39. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_lmrf.py +0 -0
  40. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_lognormal.py +0 -0
  41. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_modifiedhalfnormal.py +0 -0
  42. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_normal.py +0 -0
  43. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_posterior.py +0 -0
  44. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_smoothed_laplace.py +0 -0
  45. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_truncated_normal.py +0 -0
  46. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/distribution/_uniform.py +0 -0
  47. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/__init__.py +0 -0
  48. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/__init__.py +0 -0
  49. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_conjugate.py +0 -0
  50. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_conjugate_approx.py +0 -0
  51. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_cwmh.py +0 -0
  52. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_direct.py +0 -0
  53. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_gibbs.py +0 -0
  54. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_hmc.py +0 -0
  55. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_laplace_approximation.py +0 -0
  56. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_mh.py +0 -0
  57. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_pcn.py +0 -0
  58. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_rto.py +0 -0
  59. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_sampler.py +0 -0
  60. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_utilities.py +0 -0
  61. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/geometry/__init__.py +0 -0
  62. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/implicitprior/__init__.py +0 -0
  63. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/implicitprior/_regularizedGMRF.py +0 -0
  64. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/implicitprior/_regularizedGaussian.py +0 -0
  65. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/implicitprior/_regularizedUnboundedUniform.py +0 -0
  66. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/implicitprior/_restorator.py +0 -0
  67. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/likelihood/__init__.py +0 -0
  68. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/likelihood/_likelihood.py +0 -0
  69. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/model/__init__.py +0 -0
  70. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/model/_model.py +0 -0
  71. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/operator/__init__.py +0 -0
  72. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/operator/_operator.py +0 -0
  73. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/pde/__init__.py +0 -0
  74. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/pde/_pde.py +0 -0
  75. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/problem/__init__.py +0 -0
  76. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/problem/_problem.py +0 -0
  77. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/__init__.py +0 -0
  78. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_conjugate.py +0 -0
  79. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_conjugate_approx.py +0 -0
  80. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_cwmh.py +0 -0
  81. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_gibbs.py +0 -0
  82. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_hmc.py +0 -0
  83. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_langevin_algorithm.py +0 -0
  84. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_laplace_approximation.py +0 -0
  85. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_mh.py +0 -0
  86. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_pcn.py +0 -0
  87. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_rto.py +0 -0
  88. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/sampler/_sampler.py +0 -0
  89. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/samples/__init__.py +0 -0
  90. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/samples/_samples.py +0 -0
  91. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/solver/__init__.py +0 -0
  92. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/solver/_solver.py +0 -0
  93. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/testproblem/__init__.py +0 -0
  94. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/testproblem/_testproblem.py +0 -0
  95. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/utilities/__init__.py +0 -0
  96. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/utilities/_get_python_variable_name.py +0 -0
  97. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/utilities/_utilities.py +0 -0
  98. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/pyproject.toml +0 -0
  99. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/requirements.txt +0 -0
  100. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/setup.cfg +0 -0
  101. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/setup.py +0 -0
  102. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_MRFs.py +0 -0
  103. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_abstract_distribution_density.py +0 -0
  104. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_bayesian_inversion.py +0 -0
  105. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_density.py +0 -0
  106. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_distribution.py +0 -0
  107. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_distributions_shape.py +0 -0
  108. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_geometry.py +0 -0
  109. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_implicit_priors.py +0 -0
  110. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_joint_distribution.py +0 -0
  111. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_likelihood.py +0 -0
  112. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_model.py +0 -0
  113. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_pde.py +0 -0
  114. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_posterior.py +0 -0
  115. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_problem.py +0 -0
  116. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_sampler.py +0 -0
  117. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_samples.py +0 -0
  118. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_solver.py +0 -0
  119. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_testproblem.py +0 -0
  120. {cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/tests/test_utilities.py +0 -0
{cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/CUQIpy.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.2.0.post0.dev294
3
+ Version: 1.2.0.post0.dev314
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
6
  License: Apache License
{cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.2.0.post0.dev294
3
+ Version: 1.2.0.post0.dev314
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
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  License: Apache License
{cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/_version.py RENAMED
@@ -8,11 +8,11 @@ import json
8
8
 
9
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  version_json = '''
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  {
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- "date": "2024-11-11T14:11:48+0100",
11
+ "date": "2024-11-20T10:51:18+0100",
12
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  "dirty": false,
13
13
  "error": null,
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- "full-revisionid": "231aec2928a511ab48f0c9628b93646ef51c3c8f",
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- "version": "1.2.0.post0.dev294"
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+ "full-revisionid": "42e096c7066472ac4d5701fc5f2de53636246f5d",
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+ "version": "1.2.0.post0.dev314"
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  }
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  ''' # END VERSION_JSON
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{cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/experimental/mcmc/_langevin_algorithm.py RENAMED
@@ -3,7 +3,7 @@ import cuqi
3
3
  from cuqi.experimental.mcmc import Sampler
4
4
  from cuqi.implicitprior import RestorationPrior, MoreauYoshidaPrior
5
5
  from cuqi.array import CUQIarray
6
- from copy import deepcopy
6
+ from copy import copy
7
7
 
8
8
  class ULA(Sampler): # Refactor to Proposal-based sampler?
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  """Unadjusted Langevin algorithm (ULA) (Roberts and Tweedie, 1996)
@@ -316,11 +316,14 @@ class MYULA(ULA):
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316
 
317
317
  def _create_smoothed_target(self, value):
318
318
  """ Create a smoothed target using a Moreau-Yoshida envelope. """
319
- copied_value = deepcopy(value)
319
+ copied_value = copy(value)
320
320
  if isinstance(copied_value.prior, RestorationPrior):
321
+ # Acceess the prior name
322
+ name = value.prior.name
321
323
  copied_value.prior = MoreauYoshidaPrior(
322
324
  copied_value.prior,
323
- self.smoothing_strength)
325
+ self.smoothing_strength,
326
+ name=name)
324
327
  return copied_value
325
328
 
326
329
  def validate_target(self):
{cuqipy-1.2.0.post0.dev294 → cuqipy-1.2.0.post0.dev314}/cuqi/geometry/_geometry.py RENAMED
@@ -522,6 +522,9 @@ class Image2D(Geometry):
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522
  Plotting is handled via matplotlib.pyplot.imshow.
523
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  Colormap is defaulted to grayscale.
524
524
 
525
+ A How-To guide on the use of Image2D as the domain/range geometry of a CUQI
526
+ :class:`Model` is available `here <https://cuqi-dtu.github.io/CUQIpy/user/_auto_howtos/myula.html>`_.
527
+
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  Parameters
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  -----------
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530
  im_shape : tuple