CUQIpy 1.1.1.post0.dev86__tar.gz → 1.1.1.post0.dev88__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.


This version of CUQIpy might be problematic. Click here for more details.

Files changed (118) hide show
  1. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/CUQIpy.egg-info/PKG-INFO +1 -1
  2. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/PKG-INFO +1 -1
  3. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/_version.py +3 -3
  4. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_gibbs.py +2 -2
  5. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_sampler.py +2 -2
  6. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/CUQIpy.egg-info/SOURCES.txt +0 -0
  7. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/CUQIpy.egg-info/dependency_links.txt +0 -0
  8. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/CUQIpy.egg-info/requires.txt +0 -0
  9. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/CUQIpy.egg-info/top_level.txt +0 -0
  10. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/LICENSE +0 -0
  11. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/README.md +0 -0
  12. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/__init__.py +0 -0
  13. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/_messages.py +0 -0
  14. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/array/__init__.py +0 -0
  15. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/array/_array.py +0 -0
  16. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/config.py +0 -0
  17. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/__init__.py +0 -0
  18. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/_data.py +0 -0
  19. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/astronaut.npz +0 -0
  20. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/camera.npz +0 -0
  21. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/cat.npz +0 -0
  22. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/cookie.png +0 -0
  23. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/data/satellite.mat +0 -0
  24. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/density/__init__.py +0 -0
  25. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/density/_density.py +0 -0
  26. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/diagnostics.py +0 -0
  27. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/__init__.py +0 -0
  28. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_beta.py +0 -0
  29. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_cauchy.py +0 -0
  30. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_cmrf.py +0 -0
  31. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_custom.py +0 -0
  32. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_distribution.py +0 -0
  33. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_gamma.py +0 -0
  34. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_gaussian.py +0 -0
  35. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_gmrf.py +0 -0
  36. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_inverse_gamma.py +0 -0
  37. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_joint_distribution.py +0 -0
  38. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_laplace.py +0 -0
  39. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_lmrf.py +0 -0
  40. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_lognormal.py +0 -0
  41. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_modifiedhalfnormal.py +0 -0
  42. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_normal.py +0 -0
  43. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_posterior.py +0 -0
  44. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_smoothed_laplace.py +0 -0
  45. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/distribution/_uniform.py +0 -0
  46. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/__init__.py +0 -0
  47. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/__init__.py +0 -0
  48. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_conjugate.py +0 -0
  49. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_conjugate_approx.py +0 -0
  50. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_cwmh.py +0 -0
  51. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_direct.py +0 -0
  52. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_hmc.py +0 -0
  53. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_langevin_algorithm.py +0 -0
  54. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_laplace_approximation.py +0 -0
  55. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_mh.py +0 -0
  56. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_pcn.py +0 -0
  57. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_rto.py +0 -0
  58. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/experimental/mcmc/_utilities.py +0 -0
  59. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/geometry/__init__.py +0 -0
  60. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/geometry/_geometry.py +0 -0
  61. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/implicitprior/__init__.py +0 -0
  62. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/implicitprior/_regularizedGMRF.py +0 -0
  63. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/implicitprior/_regularizedGaussian.py +0 -0
  64. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/implicitprior/_regularizedUnboundedUniform.py +0 -0
  65. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/likelihood/__init__.py +0 -0
  66. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/likelihood/_likelihood.py +0 -0
  67. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/model/__init__.py +0 -0
  68. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/model/_model.py +0 -0
  69. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/operator/__init__.py +0 -0
  70. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/operator/_operator.py +0 -0
  71. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/pde/__init__.py +0 -0
  72. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/pde/_pde.py +0 -0
  73. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/problem/__init__.py +0 -0
  74. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/problem/_problem.py +0 -0
  75. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/__init__.py +0 -0
  76. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_conjugate.py +0 -0
  77. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_conjugate_approx.py +0 -0
  78. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_cwmh.py +0 -0
  79. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_gibbs.py +0 -0
  80. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_hmc.py +0 -0
  81. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_langevin_algorithm.py +0 -0
  82. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_laplace_approximation.py +0 -0
  83. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_mh.py +0 -0
  84. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_pcn.py +0 -0
  85. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_rto.py +0 -0
  86. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/sampler/_sampler.py +0 -0
  87. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/samples/__init__.py +0 -0
  88. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/samples/_samples.py +0 -0
  89. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/solver/__init__.py +0 -0
  90. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/solver/_solver.py +0 -0
  91. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/testproblem/__init__.py +0 -0
  92. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/testproblem/_testproblem.py +0 -0
  93. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/utilities/__init__.py +0 -0
  94. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/utilities/_get_python_variable_name.py +0 -0
  95. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/cuqi/utilities/_utilities.py +0 -0
  96. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/pyproject.toml +0 -0
  97. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/requirements.txt +0 -0
  98. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/setup.cfg +0 -0
  99. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/setup.py +0 -0
  100. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_MRFs.py +0 -0
  101. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_abstract_distribution_density.py +0 -0
  102. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_bayesian_inversion.py +0 -0
  103. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_density.py +0 -0
  104. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_distribution.py +0 -0
  105. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_distributions_shape.py +0 -0
  106. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_geometry.py +0 -0
  107. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_implicit_priors.py +0 -0
  108. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_joint_distribution.py +0 -0
  109. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_likelihood.py +0 -0
  110. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_model.py +0 -0
  111. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_pde.py +0 -0
  112. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_posterior.py +0 -0
  113. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_problem.py +0 -0
  114. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_sampler.py +0 -0
  115. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_samples.py +0 -0
  116. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_solver.py +0 -0
  117. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_testproblem.py +0 -0
  118. {cuqipy-1.1.1.post0.dev86 → cuqipy-1.1.1.post0.dev88}/tests/test_utilities.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.1.1.post0.dev86
3
+ Version: 1.1.1.post0.dev88
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
6
  License: Apache License
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.1.1.post0.dev86
3
+ Version: 1.1.1.post0.dev88
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
6
  License: Apache License
@@ -8,11 +8,11 @@ import json
8
8
 
9
9
  version_json = '''
10
10
  {
11
- "date": "2024-09-12T20:00:34+0200",
11
+ "date": "2024-09-12T22:06:24+0200",
12
12
  "dirty": false,
13
13
  "error": null,
14
- "full-revisionid": "464aa149f16618852db3d404a3d6702f34ffed0d",
15
- "version": "1.1.1.post0.dev86"
14
+ "full-revisionid": "f2fb34068f8c84bf37b3e4049a8a77391d3c432e",
15
+ "version": "1.1.1.post0.dev88"
16
16
  }
17
17
  ''' # END VERSION_JSON
18
18
 
@@ -161,7 +161,7 @@ class HybridGibbs:
161
161
 
162
162
  """
163
163
 
164
- for _ in tqdm(range(Ns)):
164
+ for _ in tqdm(range(Ns), "Sample: "):
165
165
 
166
166
  self.step()
167
167
 
@@ -184,7 +184,7 @@ class HybridGibbs:
184
184
 
185
185
  tune_interval = max(int(tune_freq * Nb), 1)
186
186
 
187
- for idx in tqdm(range(Nb)):
187
+ for idx in tqdm(range(Nb), "Warmup: "):
188
188
 
189
189
  self.step()
190
190
 
@@ -220,7 +220,7 @@ class Sampler(ABC):
220
220
  if hasattr(self, "_pre_sample"): self._pre_sample()
221
221
 
222
222
  # Draw samples
223
- for _ in tqdm( range(Ns) ):
223
+ for _ in tqdm( range(Ns), "Sample: "):
224
224
 
225
225
  # Perform one step of the sampler
226
226
  acc = self.step()
@@ -260,7 +260,7 @@ class Sampler(ABC):
260
260
  if hasattr(self, "_pre_warmup"): self._pre_warmup()
261
261
 
262
262
  # Draw warmup samples with tuning
263
- for idx in tqdm(range(Nb)):
263
+ for idx in tqdm(range(Nb), "Warmup: "):
264
264
 
265
265
  # Perform one step of the sampler
266
266
  acc = self.step()