CUQIpy 1.0.0.post0.dev84__tar.gz → 1.0.0.post0.dev91__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Potentially problematic release.

This version of CUQIpy might be problematic. Click here for more details.

Files changed (107) hide show
  1. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/PKG-INFO +2 -2
  2. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/requires.txt +1 -1
  3. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/PKG-INFO +2 -2
  4. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/_version.py +3 -3
  5. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/samples/_samples.py +10 -3
  6. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/requirements.txt +1 -1
  7. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/SOURCES.txt +0 -0
  8. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/dependency_links.txt +0 -0
  9. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/top_level.txt +0 -0
  10. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/LICENSE +0 -0
  11. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/README.md +0 -0
  12. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/__init__.py +0 -0
  13. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/_messages.py +0 -0
  14. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/array/__init__.py +0 -0
  15. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/array/_array.py +0 -0
  16. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/config.py +0 -0
  17. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/__init__.py +0 -0
  18. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/_data.py +0 -0
  19. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/astronaut.npz +0 -0
  20. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/camera.npz +0 -0
  21. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/cat.npz +0 -0
  22. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/cookie.png +0 -0
  23. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/data/satellite.mat +0 -0
  24. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/density/__init__.py +0 -0
  25. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/density/_density.py +0 -0
  26. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/diagnostics.py +0 -0
  27. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/__init__.py +0 -0
  28. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_beta.py +0 -0
  29. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_cauchy.py +0 -0
  30. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_cmrf.py +0 -0
  31. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_custom.py +0 -0
  32. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_distribution.py +0 -0
  33. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_gamma.py +0 -0
  34. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_gaussian.py +0 -0
  35. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_gmrf.py +0 -0
  36. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_inverse_gamma.py +0 -0
  37. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_joint_distribution.py +0 -0
  38. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_laplace.py +0 -0
  39. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_lmrf.py +0 -0
  40. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_lognormal.py +0 -0
  41. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_normal.py +0 -0
  42. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_posterior.py +0 -0
  43. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/distribution/_uniform.py +0 -0
  44. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/__init__.py +0 -0
  45. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/__init__.py +0 -0
  46. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/_cwmh.py +0 -0
  47. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/_langevin_algorithm.py +0 -0
  48. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/_mh.py +0 -0
  49. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/_pcn.py +0 -0
  50. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/experimental/mcmc/_sampler.py +0 -0
  51. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/geometry/__init__.py +0 -0
  52. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/geometry/_geometry.py +0 -0
  53. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/implicitprior/__init__.py +0 -0
  54. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/implicitprior/_regularizedGMRF.py +0 -0
  55. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/implicitprior/_regularizedGaussian.py +0 -0
  56. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/likelihood/__init__.py +0 -0
  57. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/likelihood/_likelihood.py +0 -0
  58. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/model/__init__.py +0 -0
  59. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/model/_model.py +0 -0
  60. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/operator/__init__.py +0 -0
  61. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/operator/_operator.py +0 -0
  62. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/pde/__init__.py +0 -0
  63. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/pde/_pde.py +0 -0
  64. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/problem/__init__.py +0 -0
  65. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/problem/_problem.py +0 -0
  66. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/__init__.py +0 -0
  67. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_conjugate.py +0 -0
  68. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_conjugate_approx.py +0 -0
  69. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_cwmh.py +0 -0
  70. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_gibbs.py +0 -0
  71. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_hmc.py +0 -0
  72. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_langevin_algorithm.py +0 -0
  73. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_laplace_approximation.py +0 -0
  74. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_mh.py +0 -0
  75. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_pcn.py +0 -0
  76. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_rto.py +0 -0
  77. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/sampler/_sampler.py +0 -0
  78. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/samples/__init__.py +0 -0
  79. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/solver/__init__.py +0 -0
  80. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/solver/_solver.py +0 -0
  81. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/testproblem/__init__.py +0 -0
  82. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/testproblem/_testproblem.py +0 -0
  83. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/utilities/__init__.py +0 -0
  84. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/utilities/_get_python_variable_name.py +0 -0
  85. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/utilities/_utilities.py +0 -0
  86. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/pyproject.toml +0 -0
  87. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/setup.cfg +0 -0
  88. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/setup.py +0 -0
  89. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_MRFs.py +0 -0
  90. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_abstract_distribution_density.py +0 -0
  91. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_bayesian_inversion.py +0 -0
  92. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_density.py +0 -0
  93. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_distribution.py +0 -0
  94. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_distributions_shape.py +0 -0
  95. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_geometry.py +0 -0
  96. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_implicit_priors.py +0 -0
  97. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_joint_distribution.py +0 -0
  98. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_likelihood.py +0 -0
  99. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_model.py +0 -0
  100. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_pde.py +0 -0
  101. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_posterior.py +0 -0
  102. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_problem.py +0 -0
  103. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_sampler.py +0 -0
  104. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_samples.py +0 -0
  105. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_solver.py +0 -0
  106. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_testproblem.py +0 -0
  107. {CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/tests/test_utilities.py +0 -0
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.0.0.post0.dev84
3
+ Version: 1.0.0.post0.dev91
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
6
  License: Apache License
@@ -202,7 +202,7 @@ Description-Content-Type: text/markdown
202
202
  License-File: LICENSE
203
203
  Requires-Dist: matplotlib
204
204
  Requires-Dist: numpy>=1.17.0
205
- Requires-Dist: scipy
205
+ Requires-Dist: scipy<1.13
206
206
  Requires-Dist: arviz
207
207
 
208
208
  <div align="center">
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/CUQIpy.egg-info/requires.txt RENAMED
@@ -1,4 +1,4 @@
1
1
  matplotlib
2
2
  numpy>=1.17.0
3
- scipy
3
+ scipy<1.13
4
4
  arviz
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: CUQIpy
3
- Version: 1.0.0.post0.dev84
3
+ Version: 1.0.0.post0.dev91
4
4
  Summary: Computational Uncertainty Quantification for Inverse problems in Python
5
5
  Maintainer-email: "Nicolai A. B. Riis" <nabr@dtu.dk>, "Jakob S. Jørgensen" <jakj@dtu.dk>, "Amal M. Alghamdi" <amaal@dtu.dk>, Chao Zhang <chaz@dtu.dk>
6
6
  License: Apache License
@@ -202,7 +202,7 @@ Description-Content-Type: text/markdown
202
202
  License-File: LICENSE
203
203
  Requires-Dist: matplotlib
204
204
  Requires-Dist: numpy>=1.17.0
205
- Requires-Dist: scipy
205
+ Requires-Dist: scipy<1.13
206
206
  Requires-Dist: arviz
207
207
 
208
208
  <div align="center">
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/_version.py RENAMED
@@ -8,11 +8,11 @@ import json
8
8
 
9
9
  version_json = '''
10
10
  {
11
- "date": "2024-03-15T10:58:55+0100",
11
+ "date": "2024-04-04T16:40:53+0200",
12
12
  "dirty": false,
13
13
  "error": null,
14
- "full-revisionid": "680cbe76e755e836b16b4ce98e7125d1d158fca2",
15
- "version": "1.0.0.post0.dev84"
14
+ "full-revisionid": "91a1edb3f1ae9412a27489f3faa9a4a9c8ff8a4a",
15
+ "version": "1.0.0.post0.dev91"
16
16
  }
17
17
  ''' # END VERSION_JSON
18
18
 
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/cuqi/samples/_samples.py RENAMED
@@ -8,13 +8,20 @@ from copy import copy
8
8
  from numbers import Number
9
9
 
10
10
  try:
11
- import arviz # Plotting tool
12
- except ImportError:
11
+ import arviz # Plotting tool
12
+ except ImportError as e:
13
13
  arviz = None
14
+ arviz_import_error = e
15
+
14
16
 
15
17
  def _check_for_arviz():
16
18
  if arviz is None:
17
- raise ImportError("The arviz package is required for this functionality. Please install arviz using `pip install arviz`.")
19
+ msg = "The arviz package is required for this functionality. "\
20
+ + "Please make sure arviz is installed. "\
21
+ + "See below for the original error message:\n"\
22
+ + arviz_import_error.args[0]
23
+
24
+ raise ImportError(msg)
18
25
 
19
26
 
20
27
  class Samples(object):
{CUQIpy-1.0.0.post0.dev84 → CUQIpy-1.0.0.post0.dev91}/requirements.txt RENAMED
@@ -1,4 +1,4 @@
1
1
  matplotlib
2
2
  numpy>=1.17.0
3
- scipy
3
+ scipy<1.13
4
4
  arviz