Braindecode 1.3.0.dev176089716__tar.gz → 1.3.0.dev176481332__tar.gz

{braindecode-1.3.0.dev176089716/braindecode.egg-info → braindecode-1.3.0.dev176481332}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: braindecode
-Version: 1.3.0.dev176089716
+Version: 1.3.0.dev176481332
 Summary: Deep learning software to decode EEG, ECG or MEG signals
 Author-email: Robin Tibor Schirrmeister <robintibor@gmail.com>
 Maintainer-email: Alexandre Gramfort <agramfort@meta.com>, Bruno Aristimunha Pinto <b.aristimunha@gmail.com>, Robin Tibor Schirrmeister <robintibor@gmail.com>

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/datasets/__init__.py

@@ -12,7 +12,7 @@ from .base import (
 from .bcicomp import BCICompetitionIVDataset4
 from .bids import BIDSDataset, BIDSEpochsDataset
 from .mne import create_from_mne_epochs, create_from_mne_raw
-from .moabb import BNCI2014_001, HGD, MOABBDataset
+from .moabb import BNCI2014001, HGD, MOABBDataset
 from .nmt import NMT
 from .sleep_physio_challe_18 import SleepPhysionetChallenge2018
 from .sleep_physionet import SleepPhysionet
@@ -29,7 +29,7 @@ __all__ = [
     "BIDSEpochsDataset",
     "MOABBDataset",
     "HGD",
-    "BNCI2014_001",
+    "BNCI2014001",
     "create_from_mne_raw",
     "create_from_mne_epochs",
     "TUH",

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/datasets/moabb.py

@@ -15,7 +15,6 @@ from typing import Any
 
 import mne
 import pandas as pd
-from mne.utils import deprecated
 
 from braindecode.util import _update_moabb_docstring
 
@@ -170,8 +169,8 @@ class MOABBDataset(BaseConcatDataset):
         super().__init__(all_base_ds)
 
 
-class BNCI2014_001(MOABBDataset):
-    doc = """See moabb.datasets.bnci.BNCI2014_001
+class BNCI2014001(MOABBDataset):
+    doc = """See moabb.datasets.bnci.BNCI2014001
 
     Parameters
     ----------
@@ -180,14 +179,14 @@ class BNCI2014_001(MOABBDataset):
         subjects is fetched.
     """
     try:
-        from moabb.datasets import BNCI2014_001
+        from moabb.datasets import BNCI2014001
 
-        __doc__ = _update_moabb_docstring(BNCI2014_001, doc)
+        __doc__ = _update_moabb_docstring(BNCI2014001, doc)
     except ModuleNotFoundError:
         pass  # keep moabb soft dependency, otherwise crash on loading of datasets.__init__.py
 
     def __init__(self, subject_ids):
-        super().__init__("BNCI2014_001", subject_ids=subject_ids)
+        super().__init__("BNCI2014001", subject_ids=subject_ids)
 
 
 class HGD(MOABBDataset):
@@ -208,12 +207,3 @@ class HGD(MOABBDataset):
 
     def __init__(self, subject_ids):
         super().__init__("Schirrmeister2017", subject_ids=subject_ids)
-
-
-@deprecated(
-    "`BNCI2014001` was renamed to `BNCI2014_001` in v1.13; this alias will be removed in v1.14."
-)
-class BNCI2014001(BNCI2014_001):
-    """Deprecated alias for BNCI2014001."""
-
-    pass

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/datautil/__init__.py

@@ -2,10 +2,6 @@
 Utilities for data manipulation.
 """
 
-from .channel_utils import (
-    division_channels_idx,
-    match_hemisphere_chans,
-)
 from .serialization import (
     _check_save_dir_empty,
     load_concat_dataset,
@@ -53,10 +49,4 @@ def __getattr__(name):
     raise AttributeError("No possible import named " + name)
 
 
-__all__ = [
-    "load_concat_dataset",
-    "save_concat_dataset",
-    "_check_save_dir_empty",
-    "match_hemisphere_chans",
-    "division_channels_idx",
-]
+__all__ = ["load_concat_dataset", "save_concat_dataset", "_check_save_dir_empty"]

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/models/__init__.py

@@ -20,7 +20,6 @@ from .eegminer import EEGMiner
 from .eegnet import EEGNet, EEGNetv4
 from .eegnex import EEGNeX
 from .eegsimpleconv import EEGSimpleConv
-from .eegsym import EEGSym
 from .eegtcnet import EEGTCNet
 from .fbcnet import FBCNet
 from .fblightconvnet import FBLightConvNet
@@ -28,7 +27,6 @@ from .fbmsnet import FBMSNet
 from .hybrid import HybridNet
 from .ifnet import IFNet
 from .labram import Labram
-from .medformer import MEDFormer
 from .msvtnet import MSVTNet
 from .patchedtransformer import PBT
 from .sccnet import SCCNet
@@ -74,7 +72,6 @@ __all__ = [
     "EEGNet",
     "EEGNetv4",
     "EEGNeX",
-    "EEGSym",
     "EEGSimpleConv",
     "EEGTCNet",
     "FBCNet",
@@ -83,7 +80,6 @@ __all__ = [
     "HybridNet",
     "IFNet",
     "Labram",
-    "MEDFormer",
     "MSVTNet",
     "PBT",
     "SCCNet",

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/models/fbcnet.py

@@ -69,9 +69,7 @@ class FBCNet(EEGModuleMixin, nn.Module):
     linear_max_norm : float, default=0.5
         Maximum norm for the final linear layer.
     filter_parameters: dict, default None
-        Dictionary of parameters to use for the FilterBankLayer.
-        If None, a default Chebyshev Type II filter with transition bandwidth of
-        2 Hz and stop-band ripple of 30 dB will be used.
+        Parameters for the FilterBankLayer
 
     References
     ----------

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/models/fbmsnet.py

@@ -1,6 +1,6 @@
 from __future__ import annotations
 
-from typing import Any, Sequence
+from typing import Optional, Sequence
 
 import torch
 from einops.layers.torch import Rearrange
@@ -57,28 +57,16 @@ class FBMSNet(EEGModuleMixin, nn.Module):
     ----------
     n_bands : int, default=9
         Number of input channels (e.g., number of frequency bands).
-    n_filters_spat : int, default=36
-        Number of output channels from the MixedConv2d layer.
-    temporal_layer : str, default='LogVarLayer'
-        Temporal aggregation layer to use.
-    n_dim: int, default=3
-        Dimension of the temporal reduction layer.
     stride_factor : int, default=4
         Stride factor for temporal segmentation.
+    temporal_layer : str, default='LogVarLayer'
+        Temporal aggregation layer to use.
+    n_filters_spat : int, default=36
+        Number of output channels from the MixedConv2d layer.
     dilatability : int, default=8
         Expansion factor for the spatial convolution block.
     activation : nn.Module, default=nn.SiLU
         Activation function class to apply.
-    kernels_weights : Sequence[int], default=(15, 31, 63, 125)
-        Kernel sizes for the MixedConv2d layer.
-    cnn_max_norm : float, default=2
-        Maximum norm constraint for the convolutional layers.
-    linear_max_norm : float, default=0.5
-        Maximum norm constraint for the linear layers.
-    filter_parameters : dict, default=None
-        Dictionary of parameters to use for the FilterBankLayer.
-        If None, a default Chebyshev Type II filter with transition bandwidth of
-        2 Hz and stop-band ripple of 30 dB will be used.
     verbose: bool, default False
         Verbose parameter to create the filter using mne.
 
@@ -115,7 +103,7 @@ class FBMSNet(EEGModuleMixin, nn.Module):
         cnn_max_norm: float = 2,
         linear_max_norm: float = 0.5,
         verbose: bool = False,
-        filter_parameters: dict[Any, Any] | None = None,
+        filter_parameters: Optional[dict] = None,
     ):
         super().__init__(
             n_chans=n_chans,

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/models/summary.csv

@@ -13,7 +13,6 @@ EEGInceptionMI,Motor Imagery,Classification,250,"n_chans, n_outputs, n_times",55
 EEGITNet,Motor Imagery,Classification,125,"n_chans, n_outputs, n_times",5212,"EEGITNet(n_chans=22,  n_outputs=4,  n_times=500)","Convolution,Recurrent"
 EEGNet,General,Classification,128,"n_chans, n_outputs, n_times",2484,"EEGNet(n_chans=22,  n_outputs=4,  n_times=512)","Convolution"
 EEGNeX,Motor Imagery,Classification,125,"n_chans, n_outputs, n_times",55940,"EEGNeX(n_chans=22,  n_outputs=4,  n_times=500)","Convolution"
-EEGSym,Motor Imagery,Classification,250,"n_chans, n_outputs, n_times, sfreq",299218,"EEGSym(n_chans=22, n_outputs=4, n_times=1000, sfreq=250)","Convolution,Channel"
 EEGMiner,Emotion Recognition,Classification,128,"n_chans, n_outputs, n_times, sfreq",7572,"EEGMiner(n_chans=62, n_outputs=2, n_times=2560, sfreq=128)","Convolution,Interpretability"
 EEGSimpleConv,Motor Imagery,Classification,80,"n_chans, n_outputs, sfreq",730404,"EEGSimpleConv(n_chans=22,  n_outputs=4,  n_times=320, sfreq=80)","Convolution"
 EEGTCNet,Motor Imagery,Classification,250,"n_chans, n_outputs",4516,"EEGTCNet(n_chans=22,  n_outputs=4,  n_times=1000, kern_length=32)","Convolution,Recurrent"
@@ -41,4 +40,3 @@ IFNet,Motor Imagery,Classification,250,"n_chans, n_outputs, n_times, sfreq",9860
 PBT,General,Classification,250,"n_chans, n_outputs, n_times",818948,"PBT(n_chans=22, n_outputs=4, n_times=1000, sfreq=250)","Large Brain Model"
 SSTDPN,Motor Imagery,Classification,250,"n_chans, n_outputs, n_times",19502,"SSTDPN(n_chans=22, n_outputs=4, n_times=1000)","Convolution,Small Attention"
 BENDR,General,"Classification,Embedding",250,"n_chans, n_times, n_outputs",157141049,"BENDR(n_chans=22, n_outputs=4, n_times=1000)","Large Brain Model,Convolution"
-MEDFormer,General,Classification,250,"n_chans, n_outputs, n_times",5313924,"MEDFormer(n_chans=22, n_outputs=4, n_times=1000)","Large Brain Model,Convolution"

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/models/util.py

@@ -79,7 +79,6 @@ models_mandatory_parameters = [
     ("SPARCNet", ["n_chans", "n_outputs", "n_times"], None),
     ("ContraWR", ["n_chans", "n_outputs", "sfreq", "n_times"], dict(sfreq=200.0)),
     ("EEGNeX", ["n_chans", "n_outputs", "n_times"], None),
-    ("EEGSym", ["chs_info", "n_chans", "n_outputs", "n_times", "sfreq"], None),
     ("TSception", ["n_chans", "n_outputs", "n_times", "sfreq"], dict(sfreq=200.0)),
     ("EEGTCNet", ["n_chans", "n_outputs", "n_times"], None),
     ("SyncNet", ["n_chans", "n_outputs", "n_times"], None),
@@ -99,7 +98,6 @@ models_mandatory_parameters = [
     ("PBT", ["n_chans", "n_outputs", "n_times"], None),
     ("SSTDPN", ["n_chans", "n_outputs", "n_times", "sfreq"], None),
     ("BENDR", ["n_chans", "n_outputs", "n_times"], None),
-    ("MEDFormer", ["n_chans", "n_outputs", "n_times"], None),
 ]
 
 ################################################################

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/modules/filter.py

@@ -109,6 +109,11 @@ class FilterBankLayer(nn.Module):
         or "firwin2" to use :func:`scipy.signal.firwin2`. "firwin" uses
         a time-domain design technique that generally gives improved
         attenuation using fewer samples than "firwin2".
+    pad : str, default='reflect_limited'
+        The type of padding to use. Supports all func:`numpy.pad()` mode options.
+        Can also be "reflect_limited", which pads with a reflected version of
+        each vector mirrored on the first and last values of the vector,
+        followed by zeros. Only used for ``method='fir'``.
     verbose: bool | str | int | None, default=True
         Control verbosity of the logging output. If ``None``, use the default
         verbosity level. See the func:`mne.verbose` for details.
@@ -178,6 +183,7 @@ class FilterBankLayer(nn.Module):
                     "The band_filters items should be splitable in 2 values."
                 )
 
+        # and we accepted as
         self.band_filters = band_filters
         self.n_bands = len(band_filters)
         self.phase = phase

braindecode-1.3.0.dev176481332/braindecode/preprocessing/__init__.py

@@ -0,0 +1,61 @@
+from .eegprep_preprocess import (
+    EEGPrep,
+    ReinterpolateRemovedChannels,
+    RemoveBadChannels,
+    RemoveBadChannelsNoLocs,
+    RemoveBadWindows,
+    RemoveBursts,
+    RemoveCommonAverageReference,
+    RemoveDCOffset,
+    RemoveDrifts,
+    RemoveFlatChannels,
+    Resampling,
+)
+from .mne_preprocess import (  # type: ignore[attr-defined]
+    Crop,
+    DropChannels,
+    Filter,
+    Pick,
+    Resample,
+    SetEEGReference,
+)
+from .preprocess import (
+    Preprocessor,
+    exponential_moving_demean,
+    exponential_moving_standardize,
+    filterbank,
+    preprocess,
+)
+from .windowers import (
+    create_fixed_length_windows,
+    create_windows_from_events,
+    create_windows_from_target_channels,
+)
+
+__all__ = [
+    "exponential_moving_demean",
+    "exponential_moving_standardize",
+    "filterbank",
+    "preprocess",
+    "Preprocessor",
+    "Resample",
+    "DropChannels",
+    "SetEEGReference",
+    "Filter",
+    "Pick",
+    "Crop",
+    "EEGPrep",
+    "RemoveDCOffset",
+    "Resampling",
+    "RemoveFlatChannels",
+    "RemoveDrifts",
+    "RemoveBadChannels",
+    "RemoveBadChannelsNoLocs",
+    "RemoveBursts",
+    "RemoveBadWindows",
+    "ReinterpolateRemovedChannels",
+    "RemoveCommonAverageReference",
+    "create_windows_from_events",
+    "create_fixed_length_windows",
+    "create_windows_from_target_channels",
+]

braindecode-1.3.0.dev176481332/braindecode/preprocessing/mne_preprocess.py

@@ -0,0 +1,77 @@
+"""Preprocessor objects based on mne methods."""
+
+# Authors: Bruna Lopes <brunajaflopes@gmail.com>
+#          Bruno Aristimunha <b.aristimunha@gmail.com>
+#
+# License: BSD-3
+import inspect
+
+import mne.io
+
+from braindecode.preprocessing.preprocess import Preprocessor
+from braindecode.util import _update_moabb_docstring
+
+
+def _generate_init_method(func):
+    """
+    Generate an __init__ method for a class based on the function's signature.
+    """
+    parameters = list(inspect.signature(func).parameters.values())
+    param_names = [param.name for param in parameters]
+
+    def init_method(self, *args, **kwargs):
+        for name, value in zip(param_names, args):
+            setattr(self, name, value)
+        for name, value in kwargs.items():
+            setattr(self, name, value)
+        self.kwargs = kwargs
+
+    init_method.__signature__ = inspect.signature(func)
+    return init_method
+
+
+def _generate_mne_pre_processor(function):
+    """
+    Generate a class based on an MNE function for preprocessing.
+    """
+    class_name = "".join(word.title() for word in function.__name__.split("_")).replace(
+        "Eeg", "EEG"
+    )
+    import_path = f"{function.__module__}.{function.__name__}"
+    doc = f" See more details in {import_path}"
+
+    base_classes = (Preprocessor,)
+    class_attrs = {
+        "__init__": _generate_init_method(function),
+        "__doc__": _update_moabb_docstring(function, doc),
+        "fn": function.__name__,
+    }
+    generated_class = type(class_name, base_classes, class_attrs)
+
+    return generated_class
+
+
+# List of MNE functions to generate classes for
+mne_functions = [
+    mne.filter.resample,
+    mne.io.Raw.drop_channels,
+    mne.io.Raw.filter,
+    mne.io.Raw.crop,
+    mne.io.Raw.pick,
+    mne.io.Raw.set_eeg_reference,
+]
+
+# Automatically generate and add classes to the global namespace
+for function in mne_functions:
+    class_obj = _generate_mne_pre_processor(function)
+    globals()[class_obj.__name__] = class_obj
+
+# Define __all__ based on the generated class names
+__all__ = [
+    class_obj.__name__
+    for class_obj in globals().values()
+    if isinstance(class_obj, type)
+]
+
+# Clean up unnecessary variables
+del mne_functions, function, class_obj

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode/preprocessing/preprocess.py

@@ -85,7 +85,7 @@ class Preprocessor(object):
 
     def apply(self, raw_or_epochs: BaseRaw | BaseEpochs):
         try:
-            return self._try_apply(raw_or_epochs)
+            self._try_apply(raw_or_epochs)
         except RuntimeError:
             # Maybe the function needs the data to be loaded and the data was
             # not loaded yet. Not all MNE functions need data to be loaded,
@@ -93,20 +93,15 @@ class Preprocessor(object):
             # without preloading data which can make the overall preprocessing
             # pipeline substantially faster.
             raw_or_epochs.load_data()
-            return self._try_apply(raw_or_epochs)
+            self._try_apply(raw_or_epochs)
 
     def _try_apply(self, raw_or_epochs):
         if callable(self.fn):
-            result = self.fn(raw_or_epochs, **self.kwargs)
-            # For standalone functions that return a new object, propagate it back
-            if result is not None and result is not raw_or_epochs:
-                return result
-            return raw_or_epochs
+            self.fn(raw_or_epochs, **self.kwargs)
         else:
             if not hasattr(raw_or_epochs, self.fn):
                 raise AttributeError(f"MNE object does not have a {self.fn} method.")
             getattr(raw_or_epochs, self.fn)(**self.kwargs)
-            return raw_or_epochs
 
 
 def preprocess(
@@ -256,21 +251,16 @@ def _preprocess(
         if raw_or_epochs.preload and copy_data:
             raw_or_epochs._data = raw_or_epochs._data.copy()
         for preproc in preprocessors:
-            raw_or_epochs = preproc.apply(raw_or_epochs)
-        return raw_or_epochs
+            preproc.apply(raw_or_epochs)
 
     if hasattr(ds, "raw"):
         if isinstance(ds, EEGWindowsDataset):
             warn(
                 f"Applying preprocessors {preprocessors} to the mne.io.Raw of an EEGWindowsDataset."
             )
-        processed = _preprocess_raw_or_epochs(ds.raw, preprocessors)
-        if processed is not ds.raw:
-            ds.raw = processed
+        _preprocess_raw_or_epochs(ds.raw, preprocessors)
     elif hasattr(ds, "windows"):
-        processed = _preprocess_raw_or_epochs(ds.windows, preprocessors)
-        if processed is not ds.windows:
-            ds.windows = processed
+        _preprocess_raw_or_epochs(ds.windows, preprocessors)
     else:
         raise ValueError(
             "Can only preprocess concatenation of RecordDataset, "

braindecode-1.3.0.dev176481332/braindecode/version.py

@@ -0,0 +1 @@
+__version__ = "1.3.0.dev176481332"

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332/braindecode.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: braindecode
-Version: 1.3.0.dev176089716
+Version: 1.3.0.dev176481332
 Summary: Deep learning software to decode EEG, ECG or MEG signals
 Author-email: Robin Tibor Schirrmeister <robintibor@gmail.com>
 Maintainer-email: Alexandre Gramfort <agramfort@meta.com>, Bruno Aristimunha Pinto <b.aristimunha@gmail.com>, Robin Tibor Schirrmeister <robintibor@gmail.com>

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/braindecode.egg-info/SOURCES.txt

@@ -33,7 +33,6 @@ braindecode/datasets/sleep_physionet.py
 braindecode/datasets/tuh.py
 braindecode/datasets/xy.py
 braindecode/datautil/__init__.py
-braindecode/datautil/channel_utils.py
 braindecode/datautil/serialization.py
 braindecode/datautil/util.py
 braindecode/functional/__init__.py
@@ -58,7 +57,6 @@ braindecode/models/eegminer.py
 braindecode/models/eegnet.py
 braindecode/models/eegnex.py
 braindecode/models/eegsimpleconv.py
-braindecode/models/eegsym.py
 braindecode/models/eegtcnet.py
 braindecode/models/fbcnet.py
 braindecode/models/fblightconvnet.py
@@ -66,7 +64,6 @@ braindecode/models/fbmsnet.py
 braindecode/models/hybrid.py
 braindecode/models/ifnet.py
 braindecode/models/labram.py
-braindecode/models/medformer.py
 braindecode/models/msvtnet.py
 braindecode/models/patchedtransformer.py
 braindecode/models/sccnet.py

{braindecode-1.3.0.dev176089716 → braindecode-1.3.0.dev176481332}/docs/api.rst

@@ -73,14 +73,12 @@ save and load models from the Hugging Face Hub, if the ``braindecode[hug]`` pack
     EEGNet
     EEGNeX
     EEGSimpleConv
-    EEGSym
     EEGTCNet
     FBCNet
     FBLightConvNet
     FBMSNet
     IFNet
     Labram
-    MEDFormer
     MSVTNet
     PBT
     SCCNet
@@ -333,7 +331,7 @@ Common Datasets
    :toctree: generated/
 
     BCICompetitionIVDataset4
-    BNCI2014_001
+    BNCI2014001
     HGD
     MOABBDataset
     NMT
@@ -365,28 +363,37 @@ Preprocessing
 
 .. currentmodule:: braindecode.preprocessing
 
-Core Functions
-''''''''''''''
-
 .. autosummary::
    :toctree: generated/
 
-    preprocess
-    Preprocessor
     create_windows_from_events
     create_fixed_length_windows
     create_windows_from_target_channels
     exponential_moving_demean
     exponential_moving_standardize
     filterbank
+    preprocess
+    Preprocessor
+    EEGPrep
 
-EEGPrep Pipeline
-''''''''''''''''
+
+Preprocessing Transform
+''''''''''''''''''''''''
+
+These modules implement various preprocessing transforms that can be applied
+to EEG data, including cropping, filtering, resampling, and channel selection.
+
+:py:mod:`braindecode.preprocessing`:
+
+.. currentmodule:: braindecode.preprocessing
 
 .. autosummary::
    :toctree: generated/
 
-    EEGPrep
+    Crop
+    DropChannels
+    Filter
+    Pick
     ReinterpolateRemovedChannels
     RemoveBadChannels
     RemoveBadChannelsNoLocs
@@ -396,107 +403,9 @@ EEGPrep Pipeline
     RemoveDCOffset
     RemoveDrifts
     RemoveFlatChannels
-
-Signal Processing
-'''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
     Resample
     Resampling
-    Filter
-    FilterData
-    NotchFilter
-    SavgolFilter
-    ApplyHilbert
-    Rescale
-    OversampledTemporalProjection
-
-Channel Management
-''''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
-    Pick
-    PickChannels
-    PickTypes
-    DropChannels
-    AddChannels
-    CombineChannels
-    RenameChannels
-    ReorderChannels
-    SetChannelTypes
-    InterpolateBads
-    InterpolateTo
-    InterpolateBridgedElectrodes
-    ComputeBridgedElectrodes
-    EqualizeChannels
-    EqualizeBads
-    FindBadChannelsLof
-
-Reference & Montage
-'''''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
     SetEEGReference
-    SetBipolarReference
-    AddReferenceChannels
-    SetMontage
-
-SSP Projections
-'''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
-    AddProj
-    ApplyProj
-    DelProj
-
-Data Transformation
-'''''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
-    Crop
-    CropByAnnotations
-    ComputeCurrentSourceDensity
-    FixStimArtifact
-    MaxwellFilter
-    RealignRaw
-    RegressArtifact
-
-Artifact Detection & Annotation
-''''''''''''''''''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
-    AnnotateAmplitude
-    AnnotateBreak
-    AnnotateMovement
-    AnnotateMuscleZscore
-    AnnotateNan
-
-Metadata & Configuration
-'''''''''''''''''''''''''
-
-.. autosummary::
-   :toctree: generated/
-
-    Anonymize
-    SetAnnotations
-    SetMeasDate
-    AddEvents
-    FixMagCoilTypes
-    ApplyGradientCompensation
-
-
 
 
 Data Utils