BERATools 0.1.0__tar.gz

beratools-0.1.0/.gitignore

@@ -0,0 +1,23 @@
+__pycache__
+/.idea
+/.spyproject
+.virtual_documents
+/dist
+/output
+
+*.slurm
+*.out
+*.pyc
+*.whl
+.project
+.pydevproject
+
+.env
+config.ini
+
+*.egg-info
+.pixi
+pixi.lock
+
+.vscode/
+/_build/

beratools-0.1.0/LICENSE

@@ -0,0 +1,22 @@
+MIT License
+
+Copyright (c) 2023, AppliedGRG
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.
+

beratools-0.1.0/PKG-INFO

@@ -0,0 +1,134 @@
+Metadata-Version: 2.4
+Name: BERATools
+Version: 0.1.0
+Summary: An advanced forest line feature analysis platform
+Project-URL: Homepage, https://github.com/appliedgrg/beratools
+Author-email: AppliedGRG <appliedgrg@gmail.com>, Richard Zeng <richardqzeng@gmail.com>
+License: MIT License
+        
+        Copyright (c) 2023, AppliedGRG
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+        
+License-File: LICENSE
+Keywords: BERA,Line
+Classifier: Development Status :: 2 - Pre-Alpha
+Classifier: Intended Audience :: Developers
+Classifier: License :: OSI Approved :: MIT License
+Classifier: Natural Language :: English
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
+Requires-Python: >=3.10
+Requires-Dist: bera-centerlines
+Requires-Dist: gdal; platform_system != 'Windows'
+Requires-Dist: geopandas
+Requires-Dist: pyogrio>=0.9.0
+Requires-Dist: pyqt5
+Requires-Dist: rasterio
+Requires-Dist: scikit-image>=0.24.0
+Requires-Dist: tqdm
+Requires-Dist: xarray-spatial
+Provides-Extra: dev
+Requires-Dist: build; extra == 'dev'
+Requires-Dist: isort; extra == 'dev'
+Requires-Dist: mypy; extra == 'dev'
+Requires-Dist: pre-commit; extra == 'dev'
+Requires-Dist: ruff; extra == 'dev'
+Requires-Dist: tox; extra == 'dev'
+Requires-Dist: twine; extra == 'dev'
+Provides-Extra: test
+Requires-Dist: pytest; extra == 'test'
+Description-Content-Type: text/markdown
+
+# BERA Tools
+<div align="center">
+BERA Tools is successor of [Forest Line Mapper](https://github.com/appliedgrg/flm). It is a toolset for enhanced delineation and attribution of linear disturbances in forests.
+
+[![GitHub Workflow Status (Build)](https://img.shields.io/github/actions/workflow/status/appliedgrg/bera-tools/python-tests.yml?branch=develop&style=for-the-badge)](https://github.com/appliedgrg/bera-tools/actions/workflows/python-tests.yml)
+[![Read the Docs](https://img.shields.io/readthedocs/bera-tools?style=for-the-badge&logo=readthedocs&logoColor=white)](https://bera-tools.readthedocs.io/en/latest/)
+<br>
+[![Conda Version](https://img.shields.io/conda/v/AppliedGRG/beratools?style=for-the-badge&logo=anaconda&color=green)](https://anaconda.org/AppliedGRG/beratools)
+[![Python - Version](https://img.shields.io/badge/PYTHON-3.9+-blue?style=for-the-badge&logo=python&logoColor=white)](https://www.python.org/downloads/release/python-390/)
+<br>
+[![License: MIT](https://img.shields.io/github/license/appliedgrg/bera-tools?style=for-the-badge&color=blue)](https://github.com/appliedgrg/bera-tools/blob/main/LICENSE)
+
+</div>
+<!--![Banner](docs/files/images/BERALogo.png)-->
+
+## [Quick Start](https://appliedgrg.github.io/beratools)
+
+BERA Tools is built upon open-source Python libraries. Anaconda is used to manage runtime environments.
+
+Installation Steps:
+
+- Install Miniconda. Download Miniconda from [Miniconda](https://docs.anaconda.com/miniconda/) and install on your machine.
+- Launch **Anaconda Prompt**. Run the following command to create a new environment. **BERA Tools** will be installed in the new environment at the same time. Download the file [conda_environment.yml](https://github.com/RichardQZeng/BTools/blob/main/conda_environment.yml) first.
+
+   ```bash
+   $ conda env create -f conda_environment.yml
+   ```
+
+   Wait until the installation is done.
+- Activate the **bera** environment and launch BERA Tools:
+
+  ```bash
+  $ conda activate bera
+  $ beratools
+  ```
+
+
+## User Guide
+
+Check the online [User Guide](https://appliedgrg.github.io/beratools/) for more information.
+
+## Technical Documentation
+
+BERA Tools provides a series of tools for forest lines processing. Please refer to the technical documentation for programming APIs and algorithm details.
+
+[Technical Documentation](https://appliedgrg.github.io/beratools/)
+
+## Development and Testing
+
+To install test dependencies:
+```bash
+pip install .[test]
+```
+
+To install development tools (e.g., ruff):
+```bash
+pip install .[dev]
+```
+
+You can combine extras:
+```bash
+pip install .[test,dev]
+```
+
+## Contribution Guide
+
+We welcome contributions! Please see our [Contribution Guide](contribution_guide.md) for details.
+
+## Credits
+
+This tool is part of the [**Boreal Ecosystem Recovery and Assessment (BERA)**](http://www.beraproject.org/) Project, and is being actively developed by the [**Applied Geospatial Research Group**](https://www.appliedgrg.ca/).
+
+![Logos](docs/files/images/BERALogo.png)
+*Copyright (C) 2025  Applied Geospatial Research Group*

beratools-0.1.0/README.md

@@ -0,0 +1,74 @@
+# BERA Tools
+<div align="center">
+BERA Tools is successor of [Forest Line Mapper](https://github.com/appliedgrg/flm). It is a toolset for enhanced delineation and attribution of linear disturbances in forests.
+
+[![GitHub Workflow Status (Build)](https://img.shields.io/github/actions/workflow/status/appliedgrg/bera-tools/python-tests.yml?branch=develop&style=for-the-badge)](https://github.com/appliedgrg/bera-tools/actions/workflows/python-tests.yml)
+[![Read the Docs](https://img.shields.io/readthedocs/bera-tools?style=for-the-badge&logo=readthedocs&logoColor=white)](https://bera-tools.readthedocs.io/en/latest/)
+<br>
+[![Conda Version](https://img.shields.io/conda/v/AppliedGRG/beratools?style=for-the-badge&logo=anaconda&color=green)](https://anaconda.org/AppliedGRG/beratools)
+[![Python - Version](https://img.shields.io/badge/PYTHON-3.9+-blue?style=for-the-badge&logo=python&logoColor=white)](https://www.python.org/downloads/release/python-390/)
+<br>
+[![License: MIT](https://img.shields.io/github/license/appliedgrg/bera-tools?style=for-the-badge&color=blue)](https://github.com/appliedgrg/bera-tools/blob/main/LICENSE)
+
+</div>
+<!--![Banner](docs/files/images/BERALogo.png)-->
+
+## [Quick Start](https://appliedgrg.github.io/beratools)
+
+BERA Tools is built upon open-source Python libraries. Anaconda is used to manage runtime environments.
+
+Installation Steps:
+
+- Install Miniconda. Download Miniconda from [Miniconda](https://docs.anaconda.com/miniconda/) and install on your machine.
+- Launch **Anaconda Prompt**. Run the following command to create a new environment. **BERA Tools** will be installed in the new environment at the same time. Download the file [conda_environment.yml](https://github.com/RichardQZeng/BTools/blob/main/conda_environment.yml) first.
+
+   ```bash
+   $ conda env create -f conda_environment.yml
+   ```
+
+   Wait until the installation is done.
+- Activate the **bera** environment and launch BERA Tools:
+
+  ```bash
+  $ conda activate bera
+  $ beratools
+  ```
+
+
+## User Guide
+
+Check the online [User Guide](https://appliedgrg.github.io/beratools/) for more information.
+
+## Technical Documentation
+
+BERA Tools provides a series of tools for forest lines processing. Please refer to the technical documentation for programming APIs and algorithm details.
+
+[Technical Documentation](https://appliedgrg.github.io/beratools/)
+
+## Development and Testing
+
+To install test dependencies:
+```bash
+pip install .[test]
+```
+
+To install development tools (e.g., ruff):
+```bash
+pip install .[dev]
+```
+
+You can combine extras:
+```bash
+pip install .[test,dev]
+```
+
+## Contribution Guide
+
+We welcome contributions! Please see our [Contribution Guide](contribution_guide.md) for details.
+
+## Credits
+
+This tool is part of the [**Boreal Ecosystem Recovery and Assessment (BERA)**](http://www.beraproject.org/) Project, and is being actively developed by the [**Applied Geospatial Research Group**](https://www.appliedgrg.ca/).
+
+![Logos](docs/files/images/BERALogo.png)
+*Copyright (C) 2025  Applied Geospatial Research Group*

beratools-0.1.0/beratools/__init__.py

@@ -0,0 +1,3 @@
+__author__ = """AppliedGRG"""
+__email__ = 'appliedgrg@gmail.com'
+__version__ = '0.1.0'