AutoStatLib 0.4.5__tar.gz → 0.4.7__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (24) hide show
  1. {autostatlib-0.4.5/src/AutoStatLib.egg-info → autostatlib-0.4.7}/PKG-INFO +2 -2
  2. {autostatlib-0.4.5 → autostatlib-0.4.7}/README.md +1 -1
  3. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/StatPlots.py +3 -2
  4. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/_version.py +1 -1
  5. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/helpers.py +3 -0
  6. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/normality_tests.py +26 -18
  7. {autostatlib-0.4.5 → autostatlib-0.4.7/src/AutoStatLib.egg-info}/PKG-INFO +2 -2
  8. {autostatlib-0.4.5 → autostatlib-0.4.7}/LICENSE +0 -0
  9. {autostatlib-0.4.5 → autostatlib-0.4.7}/MANIFEST.in +0 -0
  10. {autostatlib-0.4.5 → autostatlib-0.4.7}/pyproject.toml +0 -0
  11. {autostatlib-0.4.5 → autostatlib-0.4.7}/requirements.txt +0 -0
  12. {autostatlib-0.4.5 → autostatlib-0.4.7}/setup.cfg +0 -0
  13. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/AutoStatLib.py +0 -0
  14. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/__init__.py +0 -0
  15. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/__main__.py +0 -0
  16. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/_protocol.py +0 -0
  17. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/statistical_tests.py +0 -0
  18. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/text_formatting.py +0 -0
  19. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib.egg-info/SOURCES.txt +0 -0
  20. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib.egg-info/dependency_links.txt +0 -0
  21. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib.egg-info/requires.txt +0 -0
  22. {autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib.egg-info/top_level.txt +0 -0
  23. {autostatlib-0.4.5 → autostatlib-0.4.7}/tests/test_autostatlib.py +0 -0
  24. {autostatlib-0.4.5 → autostatlib-0.4.7}/tests/test_statplots.py +0 -0
{autostatlib-0.4.5/src/AutoStatLib.egg-info → autostatlib-0.4.7}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AutoStatLib
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- Version: 0.4.5
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+ Version: 0.4.7
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  Summary: AutoStatLib - a simple statistical analysis tool
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  Author: Stemonitis, SciWare LLC
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  Author-email: konung-yaropolk <yaropolk1995@gmail.com>
@@ -38,7 +38,7 @@ Dynamic: license-file
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  [![GitHub Actions Workflow Status](https://img.shields.io/github/actions/workflow/status/konung-yaropolk/AutoStatLib/tests.yml?label=Tests)](https://github.com/konung-yaropolk/AutoStatLib/actions/workflows/tests.yml)
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  [![pypi_version](https://img.shields.io/pypi/v/AutoStatLib?label=PyPI&color=green)](https://pypi.org/project/AutoStatLib)
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  [![GitHub Release](https://img.shields.io/github/v/release/konung-yaropolk/AutoStatLib?label=GitHub&color=green&link=https%3A%2F%2Fgithub.com%2Fkonung-yaropolk%2FAutoStatLib)](https://github.com/konung-yaropolk/AutoStatLib)
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- [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib)](https://pypi.org/project/AutoStatLib)
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+ [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib?color=green)](https://pypi.org/project/AutoStatLib)
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  [![Python](https://img.shields.io/badge/Python-v3.10%5E-green?logo=python)](https://pypi.org/project/AutoStatLib)
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  [![PyPI - Downloads](https://img.shields.io/pypi/dm/AutoStatLib?label=PyPI%20stats&color=blue)](https://pypi.org/project/AutoStatLib)
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{autostatlib-0.4.5 → autostatlib-0.4.7}/README.md RENAMED
@@ -3,7 +3,7 @@
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  [![GitHub Actions Workflow Status](https://img.shields.io/github/actions/workflow/status/konung-yaropolk/AutoStatLib/tests.yml?label=Tests)](https://github.com/konung-yaropolk/AutoStatLib/actions/workflows/tests.yml)
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  [![pypi_version](https://img.shields.io/pypi/v/AutoStatLib?label=PyPI&color=green)](https://pypi.org/project/AutoStatLib)
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  [![GitHub Release](https://img.shields.io/github/v/release/konung-yaropolk/AutoStatLib?label=GitHub&color=green&link=https%3A%2F%2Fgithub.com%2Fkonung-yaropolk%2FAutoStatLib)](https://github.com/konung-yaropolk/AutoStatLib)
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- [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib)](https://pypi.org/project/AutoStatLib)
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+ [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib?color=green)](https://pypi.org/project/AutoStatLib)
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  [![Python](https://img.shields.io/badge/Python-v3.10%5E-green?logo=python)](https://pypi.org/project/AutoStatLib)
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  [![PyPI - Downloads](https://img.shields.io/pypi/dm/AutoStatLib?label=PyPI%20stats&color=blue)](https://pypi.org/project/AutoStatLib)
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{autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/StatPlots.py RENAMED
@@ -107,11 +107,12 @@ class BaseStatPlot(Helpers):
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  data_groups: list[list[float]],
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  p_value_exact: Optional[float] = None,
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  Test_Name: str = "",
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- Paired_Test_Applied: bool = False,
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  plot_title: str = "",
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  x_label: str = "",
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  y_label: str = "",
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  print_x_labels: bool = True,
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+ Paired_Test_Applied: bool = False,
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+ Paired_Samples: bool = False,
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  Groups_Name: Optional[list[str]] = None,
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  subgrouping: Optional[list] = None,
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  Posthoc_Matrix: Optional[list[list[float]]] = None,
@@ -140,7 +141,7 @@ class BaseStatPlot(Helpers):
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  Posthoc_Matrix if Posthoc_Matrix is not None else []
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  )
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  self.n_significance_bars: int = 1
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- self.dependent: bool = Paired_Test_Applied
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+ self.dependent: bool = Paired_Test_Applied or Paired_Samples
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  self.plot_title: str = plot_title
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  self.x_label: str = x_label
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  self.y_label: str = y_label
{autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/_version.py RENAMED
@@ -1,2 +1,2 @@
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  # AutoStatLib package version:
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- __version__ = "0.4.5"
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+ __version__ = "0.4.7"
{autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/helpers.py RENAMED
@@ -112,6 +112,9 @@ class Helpers(StatAnalysisProtocol):
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  "Paired_Test_Applied": (
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  self.paired_test_applied if self.successfull else None
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  ),
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+ "Paired_Samples": (
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+ self.paired
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+ ),
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  "Tails": self.tails,
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  "p_value_exact": self.p_value.item() if self.successfull else None,
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  "Stars": self.stars_int,
{autostatlib-0.4.5 → autostatlib-0.4.7}/src/AutoStatLib/normality_tests.py RENAMED
@@ -205,22 +205,30 @@ class NormalityTests(StatAnalysisProtocol):
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  )
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  result = anderson(data, dist="norm", method=mc_method)
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  return float(result.statistic), float(result.pvalue)
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+
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+ if method == "interpolate":
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+ result = anderson(data, dist="norm", method="interpolate")
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+ return float(result.statistic), float(result.pvalue)
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- n: int = len(data)
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- ad: float = float(anderson(data, dist="norm", method="interpolate").statistic)
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-
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- # Adjust statistic for small sample sizes, then map to a
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- # continuous p-value (Jantschi & Bolboaca, 2018).
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- s: float = ad * (1 + 0.75 / n + 2.25 / (n**2))
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-
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- p: float
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- if s >= 0.6:
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- p = np.e ** (1.2937 - 5.709 * s + 0.0186 * s**2)
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- elif s > 0.34:
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- p = np.e ** (0.9177 - 4.279 * s - 1.38 * s**2)
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- elif s > 0.2:
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- p = 1 - np.e ** (-8.318 + 42.796 * s - 59.938 * s**2)
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- else:
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- p = 1 - np.e ** (-13.436 + 101.14 * s - 223.73 * s**2)
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-
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- return ad, p
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+ # n: int = len(data)
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+ # ad: float = float(anderson(data, dist="norm", method="interpolate").statistic)
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+
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+ # # Adjust statistic for small sample sizes, then map to a
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+ # # continuous p-value (Jantschi & Bolboaca, 2018).
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+ # s: float = ad * (1 + 0.75 / n + 2.25 / (n**2))
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+
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+ # try:
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+ # p: float
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+ # if s >= 0.6:
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+ # p = np.e ** (1.2937 - 5.709 * s + 0.0186 * s**2)
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+ # elif s > 0.34:
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+ # p = np.e ** (0.9177 - 4.279 * s - 1.38 * s**2)
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+ # elif s > 0.2:
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+ # p = 1 - np.e ** (-8.318 + 42.796 * s - 59.938 * s**2)
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+ # else:
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+ # p = 1 - np.e ** (-13.436 + 101.14 * s - 223.73 * s**2)
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+ # # catch rear case of overflow when p is too small
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+ # except Exception(OverflowError):
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+ # p = 5e-324
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+
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+ # return ad, p
{autostatlib-0.4.5 → autostatlib-0.4.7/src/AutoStatLib.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: AutoStatLib
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- Version: 0.4.5
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+ Version: 0.4.7
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  Summary: AutoStatLib - a simple statistical analysis tool
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  Author: Stemonitis, SciWare LLC
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  Author-email: konung-yaropolk <yaropolk1995@gmail.com>
@@ -38,7 +38,7 @@ Dynamic: license-file
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  [![GitHub Actions Workflow Status](https://img.shields.io/github/actions/workflow/status/konung-yaropolk/AutoStatLib/tests.yml?label=Tests)](https://github.com/konung-yaropolk/AutoStatLib/actions/workflows/tests.yml)
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  [![pypi_version](https://img.shields.io/pypi/v/AutoStatLib?label=PyPI&color=green)](https://pypi.org/project/AutoStatLib)
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  [![GitHub Release](https://img.shields.io/github/v/release/konung-yaropolk/AutoStatLib?label=GitHub&color=green&link=https%3A%2F%2Fgithub.com%2Fkonung-yaropolk%2FAutoStatLib)](https://github.com/konung-yaropolk/AutoStatLib)
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- [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib)](https://pypi.org/project/AutoStatLib)
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+ [![PyPI - License](https://img.shields.io/pypi/l/AutoStatLib?color=green)](https://pypi.org/project/AutoStatLib)
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  [![Python](https://img.shields.io/badge/Python-v3.10%5E-green?logo=python)](https://pypi.org/project/AutoStatLib)
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  [![PyPI - Downloads](https://img.shields.io/pypi/dm/AutoStatLib?label=PyPI%20stats&color=blue)](https://pypi.org/project/AutoStatLib)
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{autostatlib-0.4.5 → autostatlib-0.4.7}/LICENSE RENAMED
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{autostatlib-0.4.5 → autostatlib-0.4.7}/MANIFEST.in RENAMED
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{autostatlib-0.4.5 → autostatlib-0.4.7}/pyproject.toml RENAMED
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{autostatlib-0.4.5 → autostatlib-0.4.7}/setup.cfg RENAMED
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